RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ERMNQ8TAM6 284 aa14.8□□□□□ -0.04
PTCH1-207ENST00000429896 VTI1AQ96AJ9 217 aa14.8□□□□□ -0.04
PTCH1-207ENST00000429896 CSF1RP07333 972 aa14.79□□□□□ -0.04
PTCH1-207ENST00000429896 MCAMP43121 646 aa14.79□□□□□ -0.04
PTCH1-207ENST00000429896 ICA1Q05084 483 aa14.79□□□□□ -0.04
PTCH1-207ENST00000429896 M0R2C6 588 aa14.79□□□□□ -0.04
PTCH1-207ENST00000429896 DHX8Q14562 1220 aaKnown RBP14.79□□□□□ -0.04
PTCH1-207ENST00000429896 TMED8Q6PL24 325 aaPredicted RBP14.79□□□□□ -0.04
PTCH1-207ENST00000429896 PDCL3Q9H2J4 239 aa14.79□□□□□ -0.04
PTCH1-207ENST00000429896 NFAT5O94916 1531 aa14.79□□□□□ -0.04
PTCH1-207ENST00000429896 RBM10P98175 930 aaKnown RBP14.79□□□□□ -0.04
PTCH1-207ENST00000429896 ZSCAN16Q9H4T2 348 aaPredicted RBP14.79□□□□□ -0.04
PTCH1-207ENST00000429896 ZSCAN10Q96SZ4 725 aaPredicted RBP14.79□□□□□ -0.04
PTCH1-207ENST00000429896 UBN2Q6ZU65 1347 aa14.79□□□□□ -0.04
PTCH1-207ENST00000429896 PIK3C2AO00443 1686 aa14.79□□□□□ -0.04
PTCH1-207ENST00000429896 OSBPL3Q9H4L5 887 aa14.78□□□□□ -0.04
PTCH1-207ENST00000429896 MON2Q7Z3U7 1717 aa14.78□□□□□ -0.04
PTCH1-207ENST00000429896 EPB41L2O43491 1005 aaKnown RBP14.78□□□□□ -0.04
PTCH1-207ENST00000429896 BMP15O95972 392 aa14.78□□□□□ -0.04
PTCH1-207ENST00000429896 CHURC1Q8WUH1 139 aa14.78□□□□□ -0.04
PTCH1-207ENST00000429896 CCDC17Q96LX7 622 aa14.78□□□□□ -0.04
PTCH1-207ENST00000429896 ABT1Q9ULW3 272 aaKnown RBP14.78□□□□□ -0.04
PTCH1-207ENST00000429896 SNAP23O00161 211 aa14.78□□□□□ -0.04
PTCH1-207ENST00000429896 PCP11498 1178 aaKnown RBP14.78□□□□□ -0.04
PTCH1-207ENST00000429896 PTPDC1A2A3K4 754 aa14.78□□□□□ -0.04
PTCH1-207ENST00000429896 LCORLQ8N3X6 602 aa14.78□□□□□ -0.04
PTCH1-207ENST00000429896 CPA1P15085 419 aa14.78□□□□□ -0.04
PTCH1-207ENST00000429896 NASPP49321 788 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-207ENST00000429896 CCDC173Q0VFZ6 552 aa14.78□□□□□ -0.04
PTCH1-207ENST00000429896 KIF22Q14807 665 aa14.78□□□□□ -0.04
PTCH1-207ENST00000429896 PPP2R5BQ15173 497 aa14.77□□□□□ -0.04
PTCH1-207ENST00000429896 FAM43AQ8N2R8 423 aa14.77□□□□□ -0.04
PTCH1-207ENST00000429896 RIPOR2Q9Y4F9 1068 aa14.77□□□□□ -0.04
PTCH1-207ENST00000429896 CCDC174Q6PII3 467 aa14.77□□□□□ -0.04
PTCH1-207ENST00000429896 NAP1L4Q99733 375 aaKnown RBP14.77□□□□□ -0.04
PTCH1-207ENST00000429896 RGL2O15211 777 aa14.77□□□□□ -0.05
PTCH1-207ENST00000429896 KIFC2Q96AC6 838 aa14.77□□□□□ -0.05
PTCH1-207ENST00000429896 FAM84BQ96KN1 310 aaPredicted RBP14.77□□□□□ -0.05
PTCH1-207ENST00000429896 FGAP02671 866 aa14.77□□□□□ -0.05
PTCH1-207ENST00000429896 PI4KBQ9UBF8 816 aa14.77□□□□□ -0.05
PTCH1-207ENST00000429896 PALD1Q9ULE6 856 aa14.77□□□□□ -0.05
PTCH1-207ENST00000429896 ZNF827Q17R98 1081 aa14.76□□□□□ -0.05
PTCH1-207ENST00000429896 HSP90B2PQ58FF3 399 aa14.76□□□□□ -0.05
PTCH1-207ENST00000429896 CKAP2LQ8IYA6 745 aa14.76□□□□□ -0.05
PTCH1-207ENST00000429896 GLT8D2Q9H1C3 349 aa14.76□□□□□ -0.05
PTCH1-207ENST00000429896 USP14P54578 494 aa14.76□□□□□ -0.05
PTCH1-207ENST00000429896 FILIP1LQ4L180 1135 aa14.76□□□□□ -0.05
PTCH1-207ENST00000429896 TRMT1LQ7Z2T5 733 aaKnown RBP14.76□□□□□ -0.05
PTCH1-207ENST00000429896 CPXCR1Q8N123 301 aa14.76□□□□□ -0.05
PTCH1-207ENST00000429896 FAM193AP78312 1265 aa14.76□□□□□ -0.05
PTCH1-207ENST00000429896 APOBEC3FQ8IUX4 373 aaKnown RBP14.76□□□□□ -0.05
PTCH1-207ENST00000429896 C2orf69Q8N8R5 385 aa14.76□□□□□ -0.05
PTCH1-207ENST00000429896 CENPHQ9H3R5 247 aa14.76□□□□□ -0.05
PTCH1-207ENST00000429896 DEXIO95424 95 aa14.76□□□□□ -0.05
PTCH1-207ENST00000429896 HSPA4P34932 840 aa14.76□□□□□ -0.05
PTCH1-207ENST00000429896 PYM1Q9BRP8 204 aaKnown RBP14.76□□□□□ -0.05
PTCH1-207ENST00000429896 NUP62CLQ9H1M0 184 aa14.76□□□□□ -0.05
PTCH1-207ENST00000429896 PAGR1Q9BTK6 254 aa14.75□□□□□ -0.05
PTCH1-207ENST00000429896 UBA7P41226 1012 aa14.75□□□□□ -0.05
PTCH1-207ENST00000429896 SLC10A5Q5PT55 438 aa14.75□□□□□ -0.05
PTCH1-207ENST00000429896 BRPF3Q9ULD4 1205 aa14.75□□□□□ -0.05
PTCH1-207ENST00000429896 POLRMTO00411 1230 aaKnown RBP14.75□□□□□ -0.05
PTCH1-207ENST00000429896 PTH1RQ03431 593 aa14.75□□□□□ -0.05
PTCH1-207ENST00000429896 ARGLU1Q9NWB6 273 aaPredicted RBP14.75□□□□□ -0.05
PTCH1-207ENST00000429896 SERPINB13Q9UIV8 391 aa14.75□□□□□ -0.05
PTCH1-207ENST00000429896 MED23Q9ULK4 1368 aa14.75□□□□□ -0.05
PTCH1-207ENST00000429896 MCM4P33991 863 aa14.75□□□□□ -0.05
PTCH1-207ENST00000429896 ATG9AQ7Z3C6 839 aa14.75□□□□□ -0.05
PTCH1-207ENST00000429896 V9GY48 417 aaPredicted RBP14.75□□□□□ -0.05
PTCH1-207ENST00000429896 H0YHG0 523 aa14.75□□□□□ -0.05
PTCH1-207ENST00000429896 PUS7LQ9H0K6 701 aaKnown RBP14.75□□□□□ -0.05
PTCH1-207ENST00000429896 TSPY26PQ9H489 355 aa14.75□□□□□ -0.05
PTCH1-207ENST00000429896 SERPINC1P01008 464 aa14.74□□□□□ -0.05
PTCH1-207ENST00000429896 PRDX5P30044 214 aa14.74□□□□□ -0.05
PTCH1-207ENST00000429896 AMPD3Q01432 767 aa14.74□□□□□ -0.05
PTCH1-207ENST00000429896 AXDND1Q5T1B0 1012 aaPredicted RBP14.74□□□□□ -0.05
PTCH1-207ENST00000429896 TOP1P11387 765 aaKnown RBP14.74□□□□□ -0.05
PTCH1-207ENST00000429896 PPM1FP49593 454 aaPredicted RBP14.74□□□□□ -0.05
PTCH1-207ENST00000429896 CDR1P51861 262 aa14.74□□□□□ -0.05
PTCH1-207ENST00000429896 KIF4BQ2VIQ3 1234 aa14.74□□□□□ -0.05
PTCH1-207ENST00000429896 STRIP1Q5VSL9 837 aa14.74□□□□□ -0.05
PTCH1-207ENST00000429896 PRKAB2O43741 272 aa14.74□□□□□ -0.05
PTCH1-207ENST00000429896 CCDC192P0DO97 292 aa14.74□□□□□ -0.05
PTCH1-207ENST00000429896 MIGA2Q7L4E1 593 aa14.74□□□□□ -0.05
PTCH1-207ENST00000429896 LRRC47Q8N1G4 583 aaKnown RBP14.74□□□□□ -0.05
PTCH1-207ENST00000429896 SNX21Q969T3 373 aa14.74□□□□□ -0.05
PTCH1-207ENST00000429896 MYL10Q9BUA6 226 aa14.74□□□□□ -0.05
PTCH1-207ENST00000429896 SLC5A4Q9NY91 659 aa14.74□□□□□ -0.05
PTCH1-207ENST00000429896 OSBPP22059 807 aa14.74□□□□□ -0.05
PTCH1-207ENST00000429896 FOXP4Q8IVH2 680 aaPredicted RBP14.74□□□□□ -0.05
PTCH1-207ENST00000429896 HOMER2Q9NSB8 354 aa14.74□□□□□ -0.05
PTCH1-207ENST00000429896 HACL1Q9UJ83 578 aa14.74□□□□□ -0.05
PTCH1-207ENST00000429896 GDF11O95390 407 aa14.74□□□□□ -0.05
PTCH1-207ENST00000429896 CALRP27797 417 aaKnown RBP14.74□□□□□ -0.05
PTCH1-207ENST00000429896 PTF1AQ7RTS3 328 aa14.74□□□□□ -0.05
PTCH1-207ENST00000429896 SUGT1Q9Y2Z0 365 aa14.74□□□□□ -0.05
PTCH1-207ENST00000429896 ZSCAN22P10073 491 aaPredicted RBP14.73□□□□□ -0.05
PTCH1-207ENST00000429896 USH1GQ495M9 461 aa14.73□□□□□ -0.05
PTCH1-207ENST00000429896 MICALL2Q8IY33 904 aa14.73□□□□□ -0.05
PTCH1-207ENST00000429896 SH3RF3Q8TEJ3 882 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms