RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 PHKBQ93100 1093 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 SERTAD1Q9UHV2 236 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 SUFUQ9UMX1 484 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 ADAMTSL3P82987 1691 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 SETD1BQ9UPS6 1966 aaKnown RBP12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 KDM4FA0A1W2PPD8 638 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 SRGAP2O75044 1071 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 PPP6R2O75170 966 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 CDC25AP30304 524 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 ATP6V1AP38606 617 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 ARHGAP25P42331 645 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 HSP90AB3PQ58FF7 597 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 MYD88Q99836 296 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 POLR2DO15514 142 aaKnown RBP12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 MFAP3LO75121 409 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 MYBL2P10244 700 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 RFX5P48382 616 aaPredicted RBP12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 ERVK-24P63145 666 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 AMPD2Q01433 879 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 TTC39AQ5SRH9 613 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 ZMYM1Q5SVZ6 1142 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 ZNF530Q6P9A1 599 aaPredicted RBP12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 CTCFLQ8NI51 663 aaPredicted RBP12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 FAM76AQ8TAV0 307 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 BCAS4Q8TDM0 211 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 CAPZA3Q96KX2 299 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 SLF1Q9BQI6 1058 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 VIPAS39Q9H9C1 493 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 HELLSQ9NRZ9 838 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 NEURL1BA8MQ27 555 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 AGPSO00116 658 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 USP14P54578 494 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 ANTXR2P58335 489 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 APTXQ7Z2E3 356 aaKnown RBP12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 MMS19Q96T76 1030 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 COPRSQ9NQ92 184 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 DONSONQ9NYP3 566 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 DENND2AQ9ULE3 1009 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 TFR2Q9UP52 801 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 TECPR2O15040 1411 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 MRC1P22897 1456 aa12.57□□□□□ -0.4
SEMA4D-209ENST00000429836 TOPAZ1Q8N9V7 1692 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 RNF225M0QZC1 329 aaPredicted RBP12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 MYO1FO00160 1098 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 CLGNO14967 610 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 INPP5BP32019 993 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 TIMM10P62072 90 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 TUBB2AQ13885 445 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 GCKRQ14397 625 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 MLKLQ8NB16 471 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 COG1Q8WTW3 980 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 CRACR2AQ9BSW2 395 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 TUBB2BQ9BVA1 445 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 NBPF3Q9H094 633 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 FAM107BQ9H098 131 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 GUCA1BQ9UMX6 200 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 MYH8P13535 1937 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 RFX7Q2KHR2 1363 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 TNRQ92752 1358 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 KDM3BQ7LBC6 1761 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 FAM237AA0A1B0GTK4 181 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 GOLGA6CA6NDK9 693 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 SHOX2O60902 331 aaPredicted RBP12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 DDX58O95786 925 aaKnown RBP12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 A1BGP04217 495 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 GYPCP04921 128 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 GOLGA6DP0CG33 693 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 PIP4K2AP48426 406 aaPredicted RBP12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 TUBB4BP68371 445 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 MORC3Q14149 939 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 ANKRD24Q8TF21 1146 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 JPH2Q9BR39 696 aaPredicted RBP12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 NAA15Q9BXJ9 866 aaKnown RBP12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 GOLGA6AQ9NYA3 693 aa12.56□□□□□ -0.4
SEMA4D-209ENST00000429836 CASP1P29466 404 aa12.55□□□□□ -0.4
SEMA4D-209ENST00000429836 CCT6AP40227 531 aaKnown RBP12.55□□□□□ -0.4
SEMA4D-209ENST00000429836 TTF2Q9UNY4 1162 aaKnown RBP12.55□□□□□ -0.4
SEMA4D-209ENST00000429836 CAPN7Q9Y6W3 813 aa12.55□□□□□ -0.4
SEMA4D-209ENST00000429836 IBSPP21815 317 aaPredicted RBP12.55□□□□□ -0.4
SEMA4D-209ENST00000429836 GNGT1P63211 74 aa12.55□□□□□ -0.4
SEMA4D-209ENST00000429836 UBE3BQ7Z3V4 1068 aa12.55□□□□□ -0.4
SEMA4D-209ENST00000429836 SMYD4Q8IYR2 804 aaPredicted RBP12.55□□□□□ -0.4
SEMA4D-209ENST00000429836 NKX2-3Q8TAU0 364 aa12.55□□□□□ -0.4
SEMA4D-209ENST00000429836 OSBP2Q969R2 916 aa12.55□□□□□ -0.4
SEMA4D-209ENST00000429836 CPLX2Q6PUV4 134 aaKnown RBP12.55□□□□□ -0.4
SEMA4D-209ENST00000429836 SELENOOQ9BVL4 669 aa12.55□□□□□ -0.4
SEMA4D-209ENST00000429836 POLD4Q9HCU8 107 aa12.55□□□□□ -0.4
SEMA4D-209ENST00000429836 MED1Q15648 1581 aaPredicted RBP12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 TUBBP07437 444 aa12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 CD44P16070 742 aaKnown RBP12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 PLCD1P51178 756 aa12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 NEXNQ0ZGT2 675 aa12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 USP49Q70CQ1 688 aa12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 MB21D2Q8IYB1 491 aaPredicted RBP12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 KRI1Q8N9T8 703 aaKnown RBP12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 CAPS2Q9BXY5 557 aa12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 ADD3Q9UEY8 706 aaKnown RBP12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 GRIN2DO15399 1336 aa12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 FOXP2O15409 715 aa12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 RNF113AO15541 343 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms