RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 OPTNQ96CV9 577 aa21.09■□□□□ 0.97
CTSD-203ENST00000429746 MS4A4AQ96JQ5 239 aa21.09■□□□□ 0.97
CTSD-203ENST00000429746 NOL10Q9BSC4 688 aaKnown RBP21.09■□□□□ 0.97
CTSD-203ENST00000429746 PUS7LQ9H0K6 701 aaKnown RBP21.09■□□□□ 0.97
CTSD-203ENST00000429746 MAGEB6P1A0A0J9YX57 407 aa21.08■□□□□ 0.97
CTSD-203ENST00000429746 PDE4AP27815 886 aa21.08■□□□□ 0.97
CTSD-203ENST00000429746 CERS3Q8IU89 383 aa21.08■□□□□ 0.97
CTSD-203ENST00000429746 PLEKHM2Q8IWE5 1019 aa21.08■□□□□ 0.97
CTSD-203ENST00000429746 ARMT1Q9H993 441 aa21.08■□□□□ 0.97
CTSD-203ENST00000429746 PALD1Q9ULE6 856 aa21.08■□□□□ 0.97
CTSD-203ENST00000429746 TESPA1A2RU30 521 aaPredicted RBP21.07■□□□□ 0.96
CTSD-203ENST00000429746 ZSCAN29Q8IWY8 852 aaPredicted RBP21.07■□□□□ 0.96
CTSD-203ENST00000429746 OSBP2Q969R2 916 aa21.07■□□□□ 0.96
CTSD-203ENST00000429746 CFHR5Q9BXR6 569 aa21.07■□□□□ 0.96
CTSD-203ENST00000429746 OSBPL3Q9H4L5 887 aa21.07■□□□□ 0.96
CTSD-203ENST00000429746 MANSC4A6NHS7 340 aaPredicted RBP21.06■□□□□ 0.96
CTSD-203ENST00000429746 ERC2O15083 957 aa21.06■□□□□ 0.96
CTSD-203ENST00000429746 PRKAB2O43741 272 aa21.06■□□□□ 0.96
CTSD-203ENST00000429746 MBD4O95243 580 aa21.06■□□□□ 0.96
CTSD-203ENST00000429746 ALDH1A1P00352 501 aa21.06■□□□□ 0.96
CTSD-203ENST00000429746 JAG1P78504 1218 aa21.06■□□□□ 0.96
CTSD-203ENST00000429746 PTPN18Q99952 460 aa21.06■□□□□ 0.96
CTSD-203ENST00000429746 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.06■□□□□ 0.96
CTSD-203ENST00000429746 MCOLN1Q9GZU1 580 aa21.06■□□□□ 0.96
CTSD-203ENST00000429746 DHX36Q9H2U1 1008 aaKnown RBP21.06■□□□□ 0.96
CTSD-203ENST00000429746 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.06■□□□□ 0.96
CTSD-203ENST00000429746 IGF2BP3O00425 579 aaKnown RBP eCLIP21.05■□□□□ 0.96
CTSD-203ENST00000429746 DGKZQ13574 1117 aa21.05■□□□□ 0.96
CTSD-203ENST00000429746 SDR42E1Q8WUS8 393 aa21.05■□□□□ 0.96
CTSD-203ENST00000429746 DCP1AQ9NPI6 582 aaPredicted RBP21.05■□□□□ 0.96
CTSD-203ENST00000429746 SAP30BPQ9UHR5 308 aaKnown RBP21.05■□□□□ 0.96
CTSD-203ENST00000429746 CSADQ9Y600 493 aa21.05■□□□□ 0.96
CTSD-203ENST00000429746 SMIM22K7EJ46 135 aa21.04■□□□□ 0.96
CTSD-203ENST00000429746 IRF6O14896 467 aa21.04■□□□□ 0.96
CTSD-203ENST00000429746 RNF113AO15541 343 aaKnown RBP21.04■□□□□ 0.96
CTSD-203ENST00000429746 MOGSQ13724 837 aa21.04■□□□□ 0.96
CTSD-203ENST00000429746 SHROOM1Q2M3G4 852 aaPredicted RBP21.04■□□□□ 0.96
CTSD-203ENST00000429746 ERO1BQ86YB8 467 aa21.04■□□□□ 0.96
CTSD-203ENST00000429746 BRI3BPQ8WY22 251 aa21.04■□□□□ 0.96
CTSD-203ENST00000429746 OTUD5Q96G74 571 aa21.04■□□□□ 0.96
CTSD-203ENST00000429746 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.04■□□□□ 0.96
CTSD-203ENST00000429746 PI4KBQ9UBF8 816 aa21.04■□□□□ 0.96
CTSD-203ENST00000429746 PLCD1P51178 756 aa21.03■□□□□ 0.96
CTSD-203ENST00000429746 GABPAQ06546 454 aa21.03■□□□□ 0.96
CTSD-203ENST00000429746 PPIL2Q13356 520 aa21.03■□□□□ 0.96
CTSD-203ENST00000429746 SCYL3Q8IZE3 742 aa21.03■□□□□ 0.96
CTSD-203ENST00000429746 HERC5Q9UII4 1024 aaKnown RBP21.03■□□□□ 0.96
CTSD-203ENST00000429746 KCNH4Q9UQ05 1017 aa21.03■□□□□ 0.96
CTSD-203ENST00000429746 M0R2C6 588 aa21.02■□□□□ 0.96
CTSD-203ENST00000429746 FOXP2O15409 715 aa21.02■□□□□ 0.96
CTSD-203ENST00000429746 PPATQ06203 517 aa21.02■□□□□ 0.96
CTSD-203ENST00000429746 SLC4A8Q2Y0W8 1093 aa21.02■□□□□ 0.96
CTSD-203ENST00000429746 ZSCAN25Q6NSZ9 544 aa21.02■□□□□ 0.96
CTSD-203ENST00000429746 APPBP2Q92624 585 aa21.02■□□□□ 0.96
CTSD-203ENST00000429746 STRBPQ96SI9 672 aaKnown RBP21.02■□□□□ 0.96
CTSD-203ENST00000429746 SEC62Q99442 399 aaKnown RBP21.02■□□□□ 0.96
CTSD-203ENST00000429746 CRNKL1Q9BZJ0 848 aaKnown RBP21.02■□□□□ 0.96
CTSD-203ENST00000429746 EHD4Q9H223 541 aa21.02■□□□□ 0.96
CTSD-203ENST00000429746 R3HDMLQ9H3Y0 253 aa21.02■□□□□ 0.96
CTSD-203ENST00000429746 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.02■□□□□ 0.96
CTSD-203ENST00000429746 CTNND1O60716 968 aaKnown RBP21.01■□□□□ 0.95
CTSD-203ENST00000429746 PTPRAP18433 802 aa21.01■□□□□ 0.95
CTSD-203ENST00000429746 USP5P45974 858 aa21.01■□□□□ 0.95
CTSD-203ENST00000429746 PKN2Q16513 984 aaKnown RBP21.01■□□□□ 0.95
CTSD-203ENST00000429746 ZMYM1Q5SVZ6 1142 aa21.01■□□□□ 0.95
CTSD-203ENST00000429746 CTU1Q7Z7A3 348 aaKnown RBP21.01■□□□□ 0.95
CTSD-203ENST00000429746 CCDC84Q86UT8 332 aaPredicted RBP21.01■□□□□ 0.95
CTSD-203ENST00000429746 IFNL1Q8IU54 200 aa21.01■□□□□ 0.95
CTSD-203ENST00000429746 FOXP4Q8IVH2 680 aaPredicted RBP21.01■□□□□ 0.95
CTSD-203ENST00000429746 ZFYP08048 801 aaPredicted RBP21■□□□□ 0.95
CTSD-203ENST00000429746 CYP2D6P10635 497 aa21■□□□□ 0.95
CTSD-203ENST00000429746 CAP2P40123 477 aa21■□□□□ 0.95
CTSD-203ENST00000429746 OTUD7BQ6GQQ9 843 aa21■□□□□ 0.95
CTSD-203ENST00000429746 TATDN1Q6P1N9 297 aa21■□□□□ 0.95
CTSD-203ENST00000429746 EPB41L4AQ9HCS5 686 aaPredicted RBP21■□□□□ 0.95
CTSD-203ENST00000429746 LOC285556D6RIA3 1793 aa21■□□□□ 0.95
CTSD-203ENST00000429746 CCDC85CA6NKD9 419 aa20.99■□□□□ 0.95
CTSD-203ENST00000429746 GSG1L2A8MUP6 293 aa20.99■□□□□ 0.95
CTSD-203ENST00000429746 RGS19P49795 217 aa20.99■□□□□ 0.95
CTSD-203ENST00000429746 EVI5LQ96CN4 794 aa20.99■□□□□ 0.95
CTSD-203ENST00000429746 AFG3L2Q9Y4W6 797 aa20.99■□□□□ 0.95
CTSD-203ENST00000429746 GPR25O00155 361 aa20.98■□□□□ 0.95
CTSD-203ENST00000429746 GPAA1O43292 621 aa20.98■□□□□ 0.95
CTSD-203ENST00000429746 TBC1D8O95759 1140 aa20.98■□□□□ 0.95
CTSD-203ENST00000429746 SHMT1P34896 483 aa20.98■□□□□ 0.95
CTSD-203ENST00000429746 FSD1Q9BTV5 496 aa20.98■□□□□ 0.95
CTSD-203ENST00000429746 ATP8A2Q9NTI2 1148 aa20.98■□□□□ 0.95
CTSD-203ENST00000429746 ZBTB47Q9UFB7 747 aaPredicted RBP20.98■□□□□ 0.95
CTSD-203ENST00000429746 CYP2D7A0A087X1C5 515 aa20.97■□□□□ 0.95
CTSD-203ENST00000429746 GTF2A2P52657 109 aa20.97■□□□□ 0.95
CTSD-203ENST00000429746 FAM43AQ8N2R8 423 aa20.97■□□□□ 0.95
CTSD-203ENST00000429746 ZNF296Q8WUU4 475 aaPredicted RBP20.97■□□□□ 0.95
CTSD-203ENST00000429746 MCM9Q9NXL9 1143 aa20.97■□□□□ 0.95
CTSD-203ENST00000429746 SERPINB13Q9UIV8 391 aa20.97■□□□□ 0.95
CTSD-203ENST00000429746 HTTP42858 3142 aa20.97■□□□□ 0.95
CTSD-203ENST00000429746 MYH8P13535 1937 aa20.96■□□□□ 0.95
CTSD-203ENST00000429746 GREB1LQ9C091 1923 aaPredicted RBP20.96■□□□□ 0.95
CTSD-203ENST00000429746 CCL15-CCL14A0A0B4J2E2 113 aa20.96■□□□□ 0.95
CTSD-203ENST00000429746 GSPT1P15170 499 aaKnown RBP20.96■□□□□ 0.95
CTSD-203ENST00000429746 CCL15Q16663 113 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms