RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 STK11IPQ8N1F8 1099 aa15.31■□□□□ 0.04
SNRNP200-202ENST00000429650 ERO1AQ96HE7 468 aa15.31■□□□□ 0.04
SNRNP200-202ENST00000429650 MPHOSPH8Q99549 860 aa15.31■□□□□ 0.04
SNRNP200-202ENST00000429650 SEC31BQ9NQW1 1179 aa15.31■□□□□ 0.04
SNRNP200-202ENST00000429650 PCDHA5Q9Y5H7 936 aa15.31■□□□□ 0.04
SNRNP200-202ENST00000429650 PNPLA7Q6ZV29 1317 aa15.31■□□□□ 0.04
SNRNP200-202ENST00000429650 CBFA2T2O43439 604 aa15.31■□□□□ 0.04
SNRNP200-202ENST00000429650 GNAT2P19087 354 aa15.31■□□□□ 0.04
SNRNP200-202ENST00000429650 TDO2P48775 406 aa15.31■□□□□ 0.04
SNRNP200-202ENST00000429650 RTN1Q16799 776 aa15.31■□□□□ 0.04
SNRNP200-202ENST00000429650 OLFM4Q6UX06 510 aa15.31■□□□□ 0.04
SNRNP200-202ENST00000429650 DIS3L2Q8IYB7 885 aaKnown RBP15.31■□□□□ 0.04
SNRNP200-202ENST00000429650 ZKSCAN3Q9BRR0 538 aa15.31■□□□□ 0.04
SNRNP200-202ENST00000429650 SERPINC1P01008 464 aa15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 SAFBQ15424 915 aaKnown RBP eCLIP15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 NACAP1Q9BZK3 213 aa15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 KCNJ14Q9UNX9 436 aa15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 SLC4A4Q9Y6R1 1079 aa15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 FOXN1O15353 648 aa15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 SLU7O95391 586 aaKnown RBP15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 BCAMP50895 628 aa15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 MDM2Q00987 491 aaPredicted RBP15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 DMTNQ08495 405 aa15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 WTAPQ15007 396 aa15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 SART3Q15020 963 aaKnown RBP15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 SPECC1Q5M775 1068 aa15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 ELOA2Q8IYF1 753 aaPredicted RBP15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 TRIM22Q8IYM9 498 aa15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 TOMM22Q9NS69 142 aa15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 OGFRQ9NZT2 677 aa15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 STRCQ7RTU9 1775 aa15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 MYO1BO43795 1136 aa15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 BMP6P22004 513 aa15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 EIF5P55010 431 aaKnown RBP15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 CFAP100Q494V2 611 aa15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 FOXP1Q9H334 677 aaPredicted RBP15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 L2HGDHQ9H9P8 463 aa15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.3■□□□□ 0.045e-6■□□□□ 10.3
SNRNP200-202ENST00000429650 V9GYY5 206 aaPredicted RBP15.3■□□□□ 0.04
SNRNP200-202ENST00000429650 PTPREP23469 700 aa15.29■□□□□ 0.04
SNRNP200-202ENST00000429650 GRIN1Q05586 938 aa15.29■□□□□ 0.04
SNRNP200-202ENST00000429650 PDE4BQ07343 736 aa15.29■□□□□ 0.04
SNRNP200-202ENST00000429650 SYT10Q6XYQ8 523 aa15.29■□□□□ 0.04
SNRNP200-202ENST00000429650 FANCLQ9NW38 375 aa15.29■□□□□ 0.04
SNRNP200-202ENST00000429650 FBXO2Q9UK22 296 aaPredicted RBP15.29■□□□□ 0.04
SNRNP200-202ENST00000429650 GTF2E1P29083 439 aaPredicted RBP15.29■□□□□ 0.04
SNRNP200-202ENST00000429650 RILPL1Q5EBL4 403 aa15.29■□□□□ 0.04
SNRNP200-202ENST00000429650 UTP14CQ5TAP6 766 aaKnown RBP15.29■□□□□ 0.04
SNRNP200-202ENST00000429650 VSTM4Q8IW00 320 aa15.29■□□□□ 0.04
SNRNP200-202ENST00000429650 CRACR2BQ8N4Y2 399 aaPredicted RBP15.29■□□□□ 0.04
SNRNP200-202ENST00000429650 MTA3Q9BTC8 594 aa15.29■□□□□ 0.04
SNRNP200-202ENST00000429650 UTP14AQ9BVJ6 771 aaKnown RBP15.29■□□□□ 0.04
SNRNP200-202ENST00000429650 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.29■□□□□ 0.04
SNRNP200-202ENST00000429650 PLCH1Q4KWH8 1693 aa15.28■□□□□ 0.04
SNRNP200-202ENST00000429650 ERICH2A1L162 156 aa15.28■□□□□ 0.04
SNRNP200-202ENST00000429650 EXOC5O00471 708 aa15.28■□□□□ 0.04
SNRNP200-202ENST00000429650 DEXIO95424 95 aa15.28■□□□□ 0.04
SNRNP200-202ENST00000429650 CCDC82Q8N4S0 544 aa15.28■□□□□ 0.04
SNRNP200-202ENST00000429650 MIGA1Q8NAN2 632 aa15.28■□□□□ 0.04
SNRNP200-202ENST00000429650 ZNF397Q8NF99 534 aaPredicted RBP15.28■□□□□ 0.04
SNRNP200-202ENST00000429650 TMX1Q9H3N1 280 aa15.28■□□□□ 0.04
SNRNP200-202ENST00000429650 DDX41Q9UJV9 622 aaKnown RBP15.28■□□□□ 0.04
SNRNP200-202ENST00000429650 TMEM232C9JQI7 657 aa15.28■□□□□ 0.04
SNRNP200-202ENST00000429650 TUBB4AP04350 444 aa15.28■□□□□ 0.04
SNRNP200-202ENST00000429650 ELF2Q15723 593 aa15.28■□□□□ 0.04
SNRNP200-202ENST00000429650 CMTR1Q8N1G2 835 aaKnown RBP15.28■□□□□ 0.04
SNRNP200-202ENST00000429650 TMTC2Q8N394 836 aa15.28■□□□□ 0.04
SNRNP200-202ENST00000429650 DOT1LQ8TEK3 1739 aa15.28■□□□□ 0.04
SNRNP200-202ENST00000429650 HOOK1Q9UJC3 728 aaKnown RBP15.28■□□□□ 0.04
SNRNP200-202ENST00000429650 MAN1B1Q9UKM7 699 aa15.28■□□□□ 0.04
SNRNP200-202ENST00000429650 PHLPP1O60346 1717 aa15.27■□□□□ 0.04
SNRNP200-202ENST00000429650 MYH6P13533 1939 aa15.27■□□□□ 0.04
SNRNP200-202ENST00000429650 COL14A1Q05707 1796 aaKnown RBP15.27■□□□□ 0.04
SNRNP200-202ENST00000429650 CCDC196A0A1B0GTZ2 297 aa15.27■□□□□ 0.04
SNRNP200-202ENST00000429650 RCAN1P53805 252 aa15.27■□□□□ 0.04
SNRNP200-202ENST00000429650 NR5A1Q13285 461 aa15.27■□□□□ 0.04
SNRNP200-202ENST00000429650 POSTNQ15063 836 aa15.27■□□□□ 0.04
SNRNP200-202ENST00000429650 KMT5BQ4FZB7 885 aa15.27■□□□□ 0.04
SNRNP200-202ENST00000429650 CCDC152Q4G0S7 254 aa15.27■□□□□ 0.04
SNRNP200-202ENST00000429650 INTS5Q6P9B9 1019 aaKnown RBP15.27■□□□□ 0.04
SNRNP200-202ENST00000429650 ZNF654Q8IZM8 581 aa15.27■□□□□ 0.04
SNRNP200-202ENST00000429650 RNF41Q9H4P4 317 aaPredicted RBP15.27■□□□□ 0.04
SNRNP200-202ENST00000429650 INTS13Q9NVM9 706 aa15.27■□□□□ 0.04
SNRNP200-202ENST00000429650 PCDHB6Q9Y5E3 794 aa15.27■□□□□ 0.04
SNRNP200-202ENST00000429650 TOP1P11387 765 aaKnown RBP15.27■□□□□ 0.03
SNRNP200-202ENST00000429650 IGHMBP2P38935 993 aaKnown RBP15.27■□□□□ 0.03
SNRNP200-202ENST00000429650 CCDC93Q567U6 631 aa15.27■□□□□ 0.03
SNRNP200-202ENST00000429650 FANCBQ8NB91 859 aa15.27■□□□□ 0.03
SNRNP200-202ENST00000429650 LRP2BPQ9P2M1 347 aa15.27■□□□□ 0.03
SNRNP200-202ENST00000429650 POLR2DO15514 142 aaKnown RBP15.26■□□□□ 0.03
SNRNP200-202ENST00000429650 CCP110O43303 1012 aa15.26■□□□□ 0.03
SNRNP200-202ENST00000429650 PRR29P0C7W0 189 aa15.26■□□□□ 0.03
SNRNP200-202ENST00000429650 PPARAQ07869 468 aa15.26■□□□□ 0.03
SNRNP200-202ENST00000429650 NT5DC1Q5TFE4 455 aa15.26■□□□□ 0.03
SNRNP200-202ENST00000429650 NUP133Q8WUM0 1156 aa15.26■□□□□ 0.03
SNRNP200-202ENST00000429650 CCDC87Q9NVE4 849 aa15.26■□□□□ 0.03
SNRNP200-202ENST00000429650 SERTAD1Q9UHV2 236 aa15.26■□□□□ 0.03
SNRNP200-202ENST00000429650 RTL9Q8NET4 1388 aa15.26■□□□□ 0.03
SNRNP200-202ENST00000429650 PTPN21Q16825 1174 aa15.26■□□□□ 0.03
SNRNP200-202ENST00000429650 ZNF579Q8NAF0 562 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms