RNA–Protein interactions for RNA: ENST00000429534.1

SEC13P1-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component pseudogene 1, humanhuman

BASIC

Gene SEC13P1, Length 948 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13P1-201ENST00000429534 ERO1BQ86YB8 467 aa13.3□□□□□ -0.28
SEC13P1-201ENST00000429534 AMOTL1Q8IY63 956 aa13.3□□□□□ -0.28
SEC13P1-201ENST00000429534 CRACR2BQ8N4Y2 399 aaPredicted RBP13.3□□□□□ -0.28
SEC13P1-201ENST00000429534 ZKSCAN4Q969J2 545 aaPredicted RBP13.3□□□□□ -0.28
SEC13P1-201ENST00000429534 RILPL2Q969X0 211 aa13.3□□□□□ -0.28
SEC13P1-201ENST00000429534 EHD4Q9H223 541 aa13.3□□□□□ -0.28
SEC13P1-201ENST00000429534 DCP1AQ9NPI6 582 aaPredicted RBP13.3□□□□□ -0.28
SEC13P1-201ENST00000429534 MCM9Q9NXL9 1143 aa13.3□□□□□ -0.28
SEC13P1-201ENST00000429534 SAP30BPQ9UHR5 308 aaKnown RBP13.3□□□□□ -0.28
SEC13P1-201ENST00000429534 SLC4A4Q9Y6R1 1079 aa13.3□□□□□ -0.28
SEC13P1-201ENST00000429534 MAST2Q6P0Q8 1798 aa13.3□□□□□ -0.28
SEC13P1-201ENST00000429534 MANSC4A6NHS7 340 aaPredicted RBP13.29□□□□□ -0.28
SEC13P1-201ENST00000429534 SPDYE5A6NIY4 337 aa13.29□□□□□ -0.28
SEC13P1-201ENST00000429534 HIP1O00291 1037 aa13.29□□□□□ -0.28
SEC13P1-201ENST00000429534 CA12O43570 354 aa13.29□□□□□ -0.28
SEC13P1-201ENST00000429534 CHGBP05060 677 aa13.29□□□□□ -0.28
SEC13P1-201ENST00000429534 POLR3DP05423 398 aaPredicted RBP13.29□□□□□ -0.28
SEC13P1-201ENST00000429534 INPP5BP32019 993 aa13.29□□□□□ -0.28
SEC13P1-201ENST00000429534 SREBF2Q12772 1141 aa13.29□□□□□ -0.28
SEC13P1-201ENST00000429534 SDR42E1Q8WUS8 393 aa13.29□□□□□ -0.28
SEC13P1-201ENST00000429534 OPTNQ96CV9 577 aa13.29□□□□□ -0.28
SEC13P1-201ENST00000429534 WNK4Q96J92 1243 aa13.29□□□□□ -0.28
SEC13P1-201ENST00000429534 ELP3Q9H9T3 547 aa13.29□□□□□ -0.28
SEC13P1-201ENST00000429534 PICK1Q9NRD5 415 aa13.29□□□□□ -0.28
SEC13P1-201ENST00000429534 HELLSQ9NRZ9 838 aa13.29□□□□□ -0.28
SEC13P1-201ENST00000429534 GINM1Q9NU53 330 aa13.29□□□□□ -0.28
SEC13P1-201ENST00000429534 WBP1LQ9NX94 342 aa13.29□□□□□ -0.28
SEC13P1-201ENST00000429534 SERPINB13Q9UIV8 391 aa13.29□□□□□ -0.28
SEC13P1-201ENST00000429534 SNCAIPQ9Y6H5 919 aa13.29□□□□□ -0.28
SEC13P1-201ENST00000429534 MYH2Q9UKX2 1941 aa13.29□□□□□ -0.28
SEC13P1-201ENST00000429534 PATL2C9JE40 543 aaKnown RBP13.28□□□□□ -0.28
SEC13P1-201ENST00000429534 GPAA1O43292 621 aa13.28□□□□□ -0.28
SEC13P1-201ENST00000429534 PRKAB2O43741 272 aa13.28□□□□□ -0.28
SEC13P1-201ENST00000429534 TM4SF4P48230 202 aa13.28□□□□□ -0.28
SEC13P1-201ENST00000429534 PPATQ06203 517 aa13.28□□□□□ -0.28
SEC13P1-201ENST00000429534 SCYL3Q8IZE3 742 aa13.28□□□□□ -0.28
SEC13P1-201ENST00000429534 NACAP1Q9BZK3 213 aa13.28□□□□□ -0.28
SEC13P1-201ENST00000429534 PPP4R2Q9NY27 417 aa13.28□□□□□ -0.28
SEC13P1-201ENST00000429534 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.28□□□□□ -0.28
SEC13P1-201ENST00000429534 POLR2AP24928 1970 aaKnown RBP13.27□□□□□ -0.28
SEC13P1-201ENST00000429534 SDSP20132 328 aa13.27□□□□□ -0.29
SEC13P1-201ENST00000429534 CAP2P40123 477 aa13.27□□□□□ -0.29
SEC13P1-201ENST00000429534 GTF2A2P52657 109 aa13.27□□□□□ -0.29
SEC13P1-201ENST00000429534 MFAP1P55081 439 aaKnown RBP13.27□□□□□ -0.29
SEC13P1-201ENST00000429534 MCMDC2Q4G0Z9 681 aa13.27□□□□□ -0.29
SEC13P1-201ENST00000429534 TTC22Q5TAA0 569 aa13.27□□□□□ -0.29
SEC13P1-201ENST00000429534 TBC1D2Q9BYX2 928 aa13.27□□□□□ -0.29
SEC13P1-201ENST00000429534 GSG1L2A8MUP6 293 aa13.26□□□□□ -0.29
SEC13P1-201ENST00000429534 USP17L12C9JPN9 530 aa13.26□□□□□ -0.29
SEC13P1-201ENST00000429534 USP17L21D6R901 530 aa13.26□□□□□ -0.29
SEC13P1-201ENST00000429534 M0R2C6 588 aa13.26□□□□□ -0.29
SEC13P1-201ENST00000429534 APPP05067 770 aa13.26□□□□□ -0.29
SEC13P1-201ENST00000429534 PLCD1P51178 756 aa13.26□□□□□ -0.29
SEC13P1-201ENST00000429534 PPIL2Q13356 520 aa13.26□□□□□ -0.29
SEC13P1-201ENST00000429534 SBK1Q52WX2 424 aa13.26□□□□□ -0.29
SEC13P1-201ENST00000429534 OTUD7BQ6GQQ9 843 aa13.26□□□□□ -0.29
SEC13P1-201ENST00000429534 DOCK2Q92608 1830 aa13.26□□□□□ -0.29
SEC13P1-201ENST00000429534 OTUD5Q96G74 571 aa13.26□□□□□ -0.29
SEC13P1-201ENST00000429534 ZIC5Q96T25 663 aa13.26□□□□□ -0.29
SEC13P1-201ENST00000429534 ARPP21Q9UBL0 812 aaPredicted RBP13.26□□□□□ -0.29
SEC13P1-201ENST00000429534 SWAP70Q9UH65 585 aa13.26□□□□□ -0.29
SEC13P1-201ENST00000429534 TESPA1A2RU30 521 aaPredicted RBP13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 FAM196BA6NMK8 535 aa13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 CXCL11O14625 94 aa13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 ALDH1A1P00352 501 aa13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 ASNSP08243 561 aa13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 HSPA1AP0DMV8 641 aaKnown RBP13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 HSPA1BP0DMV9 641 aaKnown RBP13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 CETPP11597 493 aa13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 PTPRAP18433 802 aa13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 GJA5P36382 358 aa13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 GABPAQ06546 454 aa13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 MKRN3Q13064 507 aaKnown RBP13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 SNAPC2Q13487 334 aa13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 C12orf60Q5U649 245 aa13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 TATDN1Q6P1N9 297 aa13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 CTR9Q6PD62 1173 aa13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 SEC62Q99442 399 aaKnown RBP13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 DIAPH3Q9NSV4 1193 aa13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 SAGE1Q9NXZ1 904 aa13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 ZHX2Q9Y6X8 837 aa13.25□□□□□ -0.29
SEC13P1-201ENST00000429534 IRF6O14896 467 aa13.24□□□□□ -0.29
SEC13P1-201ENST00000429534 SLURP2P0DP57 97 aa13.24□□□□□ -0.29
SEC13P1-201ENST00000429534 GSPT1P15170 499 aaKnown RBP13.24□□□□□ -0.29
SEC13P1-201ENST00000429534 TDO2P48775 406 aa13.24□□□□□ -0.29
SEC13P1-201ENST00000429534 SLC4A8Q2Y0W8 1093 aa13.24□□□□□ -0.29
SEC13P1-201ENST00000429534 CERKLQ49MI3 558 aaPredicted RBP13.24□□□□□ -0.29
SEC13P1-201ENST00000429534 IFNL3Q8IZI9 196 aa13.24□□□□□ -0.29
SEC13P1-201ENST00000429534 MS4A4AQ96JQ5 239 aa13.24□□□□□ -0.29
SEC13P1-201ENST00000429534 FAM227BQ96M60 508 aa13.24□□□□□ -0.29
SEC13P1-201ENST00000429534 DNAJC18Q9H819 358 aa13.24□□□□□ -0.29
SEC13P1-201ENST00000429534 KCNH4Q9UQ05 1017 aa13.24□□□□□ -0.29
SEC13P1-201ENST00000429534 USP17L5A8MUK1 530 aa13.23□□□□□ -0.29
SEC13P1-201ENST00000429534 CTCFP49711 727 aaPredicted RBP13.23□□□□□ -0.29
SEC13P1-201ENST00000429534 NMIQ13287 307 aaPredicted RBP13.23□□□□□ -0.29
SEC13P1-201ENST00000429534 RUFY2Q8WXA3 655 aa13.23□□□□□ -0.29
SEC13P1-201ENST00000429534 CCDC17Q96LX7 622 aa13.23□□□□□ -0.29
SEC13P1-201ENST00000429534 NAPBQ9H115 298 aa13.23□□□□□ -0.29
SEC13P1-201ENST00000429534 AS3MTQ9HBK9 375 aa13.23□□□□□ -0.29
SEC13P1-201ENST00000429534 ZNF287Q9HBT7 754 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms