RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 ZNF608Q9ULD9 1512 aaPredicted RBP14.27□□□□□ -0.13
LDB3-205ENST00000429277 PEG3Q9GZU2 1588 aa14.27□□□□□ -0.13
LDB3-205ENST00000429277 CCDC169A6NNP5 214 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 CIB2O75838 187 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 TPD52P55327 224 aaPredicted RBP14.26□□□□□ -0.13
LDB3-205ENST00000429277 C8orf74Q6P047 294 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 DIS3L2Q8IYB7 885 aaKnown RBP14.26□□□□□ -0.13
LDB3-205ENST00000429277 SEC62Q99442 399 aaKnown RBP14.26□□□□□ -0.13
LDB3-205ENST00000429277 TRAPPC8Q9Y2L5 1435 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 GPAA1O43292 621 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 YWHAEP62258 255 aaKnown RBP14.26□□□□□ -0.13
LDB3-205ENST00000429277 TESK2Q96S53 571 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 VPS18Q9P253 973 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 DNM3Q9UQ16 869 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 ARHGEF10O15013 1369 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 PIK3AP1Q6ZUJ8 805 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 IFT20Q8IY31 132 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 UBLCP1Q8WVY7 318 aaPredicted RBP14.26□□□□□ -0.13
LDB3-205ENST00000429277 GPCPD1Q9NPB8 672 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 NOD1Q9Y239 953 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 BCRP11274 1271 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 DNM2P50570 870 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 PPP2R3AQ06190 1150 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 LGSNQ5TDP6 509 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 RUFY4Q6ZNE9 571 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 NT5C3AQ9H0P0 336 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 LRWD1Q9UFC0 647 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 SERPINA10Q9UK55 444 aa14.26□□□□□ -0.13
LDB3-205ENST00000429277 INSRP06213 1382 aa14.25□□□□□ -0.13
LDB3-205ENST00000429277 CCNT1O60563 726 aaKnown RBP14.25□□□□□ -0.13
LDB3-205ENST00000429277 NOP56O00567 594 aaKnown RBP14.25□□□□□ -0.13
LDB3-205ENST00000429277 FLOT1O75955 427 aa14.25□□□□□ -0.13
LDB3-205ENST00000429277 GNA14O95837 355 aa14.25□□□□□ -0.13
LDB3-205ENST00000429277 RHOXF2BP0C7M4 288 aa14.25□□□□□ -0.13
LDB3-205ENST00000429277 TRERF1Q96PN7 1200 aa14.25□□□□□ -0.13
LDB3-205ENST00000429277 RHOXF2Q9BQY4 288 aa14.25□□□□□ -0.13
LDB3-205ENST00000429277 SGSM2O43147 1006 aa14.25□□□□□ -0.13
LDB3-205ENST00000429277 AZI2Q9H6S1 392 aa14.25□□□□□ -0.13
LDB3-205ENST00000429277 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.25□□□□□ -0.13
LDB3-205ENST00000429277 RXRAP19793 462 aa14.25□□□□□ -0.13
LDB3-205ENST00000429277 EIF6P56537 245 aaKnown RBP14.25□□□□□ -0.13
LDB3-205ENST00000429277 CCDC125Q86Z20 511 aa14.25□□□□□ -0.13
LDB3-205ENST00000429277 FAM89AQ96GI7 184 aa14.25□□□□□ -0.13
LDB3-205ENST00000429277 PHACTR3Q96KR7 559 aa14.25□□□□□ -0.13
LDB3-205ENST00000429277 CCDC87Q9NVE4 849 aa14.25□□□□□ -0.13
LDB3-205ENST00000429277 OGFRQ9NZT2 677 aa14.25□□□□□ -0.13
LDB3-205ENST00000429277 V9GY48 417 aaPredicted RBP14.25□□□□□ -0.13
LDB3-205ENST00000429277 ZWINTO95229 277 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 RLBP1P12271 317 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 SLC1A4P43007 532 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 HACE1Q8IYU2 909 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 CABLES1Q8TDN4 633 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 IPO4Q8TEX9 1081 aaKnown RBP14.24□□□□□ -0.13
LDB3-205ENST00000429277 SRGAP1Q7Z6B7 1085 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 STMN2Q93045 179 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 SECISBP2LQ93073 1101 aaKnown RBP14.24□□□□□ -0.13
LDB3-205ENST00000429277 DSCC1Q9BVC3 393 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 ARMT1Q9H993 441 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 SLC52A2Q9HAB3 445 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 FEZ2Q9UHY8 353 aaPredicted RBP14.24□□□□□ -0.13
LDB3-205ENST00000429277 NUP153P49790 1475 aaKnown RBP14.24□□□□□ -0.13
LDB3-205ENST00000429277 CHL1O00533 1208 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 ZEB2O60315 1214 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 EVCP57679 992 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 NLRP12P59046 1061 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 TM6SF1Q9BZW5 370 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 BTG4Q9NY30 223 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 KDM3AQ9Y4C1 1321 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 ARHGAP6O43182 974 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 SNX29Q8TEQ0 813 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 PLIN2Q99541 437 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 AKNAD1Q5T1N1 836 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 TBC1D31Q96DN5 1066 aa14.24□□□□□ -0.13
LDB3-205ENST00000429277 SAP30BPQ9UHR5 308 aaKnown RBP14.24□□□□□ -0.13
LDB3-205ENST00000429277 GIPC1O14908 333 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 CRCPO75575 148 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 SP4Q02446 784 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 MTMR3Q13615 1198 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 DPP8Q6V1X1 898 aaPredicted RBP14.23□□□□□ -0.13
LDB3-205ENST00000429277 MICALL1Q8N3F8 863 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 RNF34Q969K3 372 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 DBNDD2Q9BQY9 259 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 ARPP21Q9UBL0 812 aaPredicted RBP14.23□□□□□ -0.13
LDB3-205ENST00000429277 P4HA1P13674 534 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 MAP7Q14244 749 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 VPS52Q8N1B4 723 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 TIMM10P62072 90 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 FANCCQ00597 558 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 NSMCE1Q8WV22 266 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 CCDC51Q96ER9 411 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 RPGRIP1Q96KN7 1286 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 SNX14Q9Y5W7 946 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 ZMYM3Q14202 1370 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 H0YIN7 160 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 SH3BP5O60239 455 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 CNGA1P29973 690 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 TXKP42681 527 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 TEKT1Q969V4 418 aa14.23□□□□□ -0.13
LDB3-205ENST00000429277 SMIM23A6NLE4 172 aa14.22□□□□□ -0.13
LDB3-205ENST00000429277 DAPK3O43293 454 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms