RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 LPIN2Q92539 896 aa10.11□□□□□ -0.79
CSTF1-203ENST00000428552 UBE2OQ9C0C9 1292 aaKnown RBP10.11□□□□□ -0.79
CSTF1-203ENST00000428552 MUC3AQ02505 3323 aa10.1□□□□□ -0.79
CSTF1-203ENST00000428552 EYA2O00167 538 aa10.1□□□□□ -0.79
CSTF1-203ENST00000428552 PEX10O60683 326 aa10.1□□□□□ -0.79
CSTF1-203ENST00000428552 LDHBP07195 334 aaKnown RBP10.1□□□□□ -0.79
CSTF1-203ENST00000428552 LRRC26Q2I0M4 334 aa10.1□□□□□ -0.79
CSTF1-203ENST00000428552 LHX8Q68G74 356 aa10.1□□□□□ -0.79
CSTF1-203ENST00000428552 FAM109BQ6ICB4 259 aaPredicted RBP10.1□□□□□ -0.79
CSTF1-203ENST00000428552 PROCA1Q8NCQ7 364 aaPredicted RBP10.1□□□□□ -0.79
CSTF1-203ENST00000428552 ZNF384Q8TF68 577 aa10.1□□□□□ -0.79
CSTF1-203ENST00000428552 HMX1Q9NP08 348 aaPredicted RBP10.1□□□□□ -0.79
CSTF1-203ENST00000428552 MYH2Q9UKX2 1941 aa10.09□□□□□ -0.79
CSTF1-203ENST00000428552 MAST2Q6P0Q8 1798 aa10.09□□□□□ -0.79
CSTF1-203ENST00000428552 FAM196BA6NMK8 535 aa10.09□□□□□ -0.79
CSTF1-203ENST00000428552 SLC5A1P13866 664 aa10.09□□□□□ -0.79
CSTF1-203ENST00000428552 PHKA1P46020 1223 aa10.09□□□□□ -0.79
CSTF1-203ENST00000428552 POTEEQ6S8J3 1075 aa10.09□□□□□ -0.79
CSTF1-203ENST00000428552 USP44Q9H0E7 712 aa10.09□□□□□ -0.79
CSTF1-203ENST00000428552 ASCC2Q9H1I8 757 aaPredicted RBP10.09□□□□□ -0.79
CSTF1-203ENST00000428552 MORF4L1Q9UBU8 362 aa10.09□□□□□ -0.79
CSTF1-203ENST00000428552 LRRFIP2Q9Y608 721 aaKnown RBP10.09□□□□□ -0.79
CSTF1-203ENST00000428552 TBC1D12O60347 775 aa10.08□□□□□ -0.8
CSTF1-203ENST00000428552 PRKAR2AP13861 404 aaKnown RBP10.08□□□□□ -0.8
CSTF1-203ENST00000428552 GCLCP48506 637 aaPredicted RBP10.08□□□□□ -0.8
CSTF1-203ENST00000428552 RHBDL3P58872 404 aa10.08□□□□□ -0.8
CSTF1-203ENST00000428552 MDM2Q00987 491 aaPredicted RBP10.08□□□□□ -0.8
CSTF1-203ENST00000428552 SPP2Q13103 211 aa10.08□□□□□ -0.8
CSTF1-203ENST00000428552 SH3D19Q5HYK7 790 aa10.08□□□□□ -0.8
CSTF1-203ENST00000428552 USP6NLQ92738 828 aa10.08□□□□□ -0.8
CSTF1-203ENST00000428552 FAM163AQ96GL9 167 aaPredicted RBP10.08□□□□□ -0.8
CSTF1-203ENST00000428552 TXNRD2Q9NNW7 524 aa10.08□□□□□ -0.8
CSTF1-203ENST00000428552 SALL2Q9Y467 1007 aaPredicted RBP10.08□□□□□ -0.8
CSTF1-203ENST00000428552 SIPA1L1O43166 1804 aa10.07□□□□□ -0.8
CSTF1-203ENST00000428552 FRMPD3Q5JV73 1810 aa10.07□□□□□ -0.8
CSTF1-203ENST00000428552 ATAD5Q96QE3 1844 aa10.07□□□□□ -0.8
CSTF1-203ENST00000428552 CYP2B6P20813 491 aa10.07□□□□□ -0.8
CSTF1-203ENST00000428552 CCND3P30281 292 aaPredicted RBP10.07□□□□□ -0.8
CSTF1-203ENST00000428552 ADORA1P30542 326 aa10.07□□□□□ -0.8
CSTF1-203ENST00000428552 ZEB1P37275 1124 aaPredicted RBP10.07□□□□□ -0.8
CSTF1-203ENST00000428552 HMGCS2P54868 508 aa10.07□□□□□ -0.8
CSTF1-203ENST00000428552 JAG1P78504 1218 aa10.07□□□□□ -0.8
CSTF1-203ENST00000428552 CACNB2Q08289 660 aaPredicted RBP10.07□□□□□ -0.8
CSTF1-203ENST00000428552 FAM161BQ96MY7 647 aa10.07□□□□□ -0.8
CSTF1-203ENST00000428552 PNMA3Q9UL41 463 aa10.07□□□□□ -0.8
CSTF1-203ENST00000428552 LTBP2Q14767 1821 aa10.07□□□□□ -0.8
CSTF1-203ENST00000428552 XRCC5P13010 732 aaKnown RBP10.06□□□□□ -0.8
CSTF1-203ENST00000428552 BTDP43251 543 aa10.06□□□□□ -0.8
CSTF1-203ENST00000428552 PICALMQ13492 652 aa10.06□□□□□ -0.8
CSTF1-203ENST00000428552 RASGRF1Q13972 1273 aa10.06□□□□□ -0.8
CSTF1-203ENST00000428552 CCL14Q16627 93 aa10.06□□□□□ -0.8
CSTF1-203ENST00000428552 ATP2B3Q16720 1220 aa10.06□□□□□ -0.8
CSTF1-203ENST00000428552 ZSCAN29Q8IWY8 852 aaPredicted RBP10.06□□□□□ -0.8
CSTF1-203ENST00000428552 MRPL50Q8N5N7 158 aaKnown RBP10.06□□□□□ -0.8
CSTF1-203ENST00000428552 ZNF280CQ8ND82 737 aa10.06□□□□□ -0.8
CSTF1-203ENST00000428552 OSBPL5Q9H0X9 879 aaPredicted RBP10.06□□□□□ -0.8
CSTF1-203ENST00000428552 PRDM6Q9NQX0 595 aa10.06□□□□□ -0.8
CSTF1-203ENST00000428552 DENND2AQ9ULE3 1009 aa10.06□□□□□ -0.8
CSTF1-203ENST00000428552 MROH7-TTC4A0A0A0MT08 1334 aa10.06□□□□□ -0.8
CSTF1-203ENST00000428552 GPR75-ASB3A0A0A6YYF3 556 aa10.05□□□□□ -0.8
CSTF1-203ENST00000428552 SEMA3EO15041 775 aa10.05□□□□□ -0.8
CSTF1-203ENST00000428552 ATXN8OSP0DMR3 200 aa10.05□□□□□ -0.8
CSTF1-203ENST00000428552 CAP2P40123 477 aa10.05□□□□□ -0.8
CSTF1-203ENST00000428552 SHROOM1Q2M3G4 852 aaPredicted RBP10.05□□□□□ -0.8
CSTF1-203ENST00000428552 Q3C1V9 767 aa10.05□□□□□ -0.8
CSTF1-203ENST00000428552 MORN1Q5T089 497 aa10.05□□□□□ -0.8
CSTF1-203ENST00000428552 CCDC102BQ68D86 513 aa10.05□□□□□ -0.8
CSTF1-203ENST00000428552 P2RX7Q99572 595 aaKnown RBP10.05□□□□□ -0.8
CSTF1-203ENST00000428552 CDX2Q99626 313 aaPredicted RBP10.05□□□□□ -0.8
CSTF1-203ENST00000428552 RBPJLQ9UBG7 517 aa10.05□□□□□ -0.8
CSTF1-203ENST00000428552 PDS5AQ29RF7 1337 aaKnown RBP10.05□□□□□ -0.8
CSTF1-203ENST00000428552 CIAO1O76071 339 aa10.04□□□□□ -0.8
CSTF1-203ENST00000428552 HOXA7P31268 230 aaPredicted RBP10.04□□□□□ -0.8
CSTF1-203ENST00000428552 MECOMQ03112 1051 aa10.04□□□□□ -0.8
CSTF1-203ENST00000428552 SIL1Q9H173 461 aa10.04□□□□□ -0.8
CSTF1-203ENST00000428552 PORCNQ9H237 461 aa10.04□□□□□ -0.8
CSTF1-203ENST00000428552 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.04□□□□□ -0.8
CSTF1-203ENST00000428552 USP17L5A8MUK1 530 aa10.03□□□□□ -0.8
CSTF1-203ENST00000428552 IGHA2P01877 340 aa10.03□□□□□ -0.8
CSTF1-203ENST00000428552 ZKSCAN1P17029 563 aaPredicted RBP10.03□□□□□ -0.8
CSTF1-203ENST00000428552 HERVK_113P62684 666 aa10.03□□□□□ -0.8
CSTF1-203ENST00000428552 PABPC4Q13310 644 aaKnown RBP eCLIP10.03□□□□□ -0.8
CSTF1-203ENST00000428552 MTMR2Q13614 643 aa10.03□□□□□ -0.8
CSTF1-203ENST00000428552 DZIP1Q86YF9 867 aaKnown RBP10.03□□□□□ -0.8
CSTF1-203ENST00000428552 SOCS4Q8WXH5 440 aa10.03□□□□□ -0.8
CSTF1-203ENST00000428552 NUDT12Q9BQG2 462 aa10.03□□□□□ -0.8
CSTF1-203ENST00000428552 WDR18Q9BV38 432 aa10.03□□□□□ -0.8
CSTF1-203ENST00000428552 TBC1D2Q9BYX2 928 aa10.03□□□□□ -0.8
CSTF1-203ENST00000428552 TTYH1Q9H313 450 aaPredicted RBP10.03□□□□□ -0.8
CSTF1-203ENST00000428552 SEMA6BQ9H3T3 888 aa10.03□□□□□ -0.8
CSTF1-203ENST00000428552 DNAJC18Q9H819 358 aa10.03□□□□□ -0.8
CSTF1-203ENST00000428552 GNL3LQ9NVN8 582 aaKnown RBP10.03□□□□□ -0.8
CSTF1-203ENST00000428552 FLRT1Q9NZU1 646 aa10.03□□□□□ -0.8
CSTF1-203ENST00000428552 FBXO3Q9UK99 471 aa10.03□□□□□ -0.8
CSTF1-203ENST00000428552 PA2G4Q9UQ80 394 aaKnown RBP10.03□□□□□ -0.8
CSTF1-203ENST00000428552 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.03□□□□□ -0.8
CSTF1-203ENST00000428552 CNMDO75829 334 aa10.02□□□□□ -0.81
CSTF1-203ENST00000428552 BACE1P56817 501 aa10.02□□□□□ -0.81
CSTF1-203ENST00000428552 SHHQ15465 462 aa10.02□□□□□ -0.81
CSTF1-203ENST00000428552 C9orf50Q5SZB4 431 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms