RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 SLC4A4Q9Y6R1 1079 aa28.15■■■□□ 2.1
GLI3-202ENST00000428534 AK9Q5TCS8 1911 aa28.14■■■□□ 2.1
GLI3-202ENST00000428534 POLR3DP05423 398 aaPredicted RBP28.14■■■□□ 2.1
GLI3-202ENST00000428534 SLC10A3P09131 477 aa28.14■■■□□ 2.1
GLI3-202ENST00000428534 CRACR2BQ8N4Y2 399 aaPredicted RBP28.14■■■□□ 2.1
GLI3-202ENST00000428534 DCP1AQ9NPI6 582 aaPredicted RBP28.14■■■□□ 2.1
GLI3-202ENST00000428534 PALD1Q9ULE6 856 aa28.14■■■□□ 2.1
GLI3-202ENST00000428534 GPAA1O43292 621 aa28.13■■■□□ 2.09
GLI3-202ENST00000428534 MFAP1P55081 439 aaKnown RBP28.13■■■□□ 2.09
GLI3-202ENST00000428534 SLFNL1Q499Z3 407 aa28.13■■■□□ 2.09
GLI3-202ENST00000428534 EHD4Q9H223 541 aa28.13■■■□□ 2.09
GLI3-202ENST00000428534 MCM9Q9NXL9 1143 aa28.13■■■□□ 2.09
GLI3-202ENST00000428534 FZD1Q9UP38 647 aa28.13■■■□□ 2.09
GLI3-202ENST00000428534 FOCADQ5VW36 1801 aa28.13■■■□□ 2.09
GLI3-202ENST00000428534 ZBTB48P10074 688 aaPredicted RBP28.12■■■□□ 2.09
GLI3-202ENST00000428534 METTL16Q86W50 562 aaKnown RBP28.12■■■□□ 2.09
GLI3-202ENST00000428534 RASAL3Q86YV0 1011 aa28.12■■■□□ 2.09
GLI3-202ENST00000428534 SDR42E1Q8WUS8 393 aa28.12■■■□□ 2.09
GLI3-202ENST00000428534 CTNND1O60716 968 aaKnown RBP28.11■■■□□ 2.09
GLI3-202ENST00000428534 CHGBP05060 677 aa28.11■■■□□ 2.09
GLI3-202ENST00000428534 SDSP20132 328 aa28.11■■■□□ 2.09
GLI3-202ENST00000428534 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.11■■■□□ 2.09
GLI3-202ENST00000428534 ZIC5Q96T25 663 aa28.11■■■□□ 2.09
GLI3-202ENST00000428534 NACAP1Q9BZK3 213 aa28.11■■■□□ 2.09
GLI3-202ENST00000428534 SAP30BPQ9UHR5 308 aaKnown RBP28.11■■■□□ 2.09
GLI3-202ENST00000428534 PATL2C9JE40 543 aaKnown RBP28.1■■■□□ 2.09
GLI3-202ENST00000428534 MCMDC2Q4G0Z9 681 aa28.1■■■□□ 2.09
GLI3-202ENST00000428534 NOL9Q5SY16 702 aaKnown RBP28.1■■■□□ 2.09
GLI3-202ENST00000428534 DIAPH3Q9NSV4 1193 aa28.1■■■□□ 2.09
GLI3-202ENST00000428534 SERPINB13Q9UIV8 391 aa28.1■■■□□ 2.09
GLI3-202ENST00000428534 FAM155AB1AL88 458 aaPredicted RBP28.09■■■□□ 2.09
GLI3-202ENST00000428534 M0R2C6 588 aa28.09■■■□□ 2.09
GLI3-202ENST00000428534 VGLL4Q14135 290 aa28.09■■■□□ 2.09
GLI3-202ENST00000428534 ERO1BQ86YB8 467 aa28.09■■■□□ 2.09
GLI3-202ENST00000428534 GINM1Q9NU53 330 aa28.09■■■□□ 2.09
GLI3-202ENST00000428534 ARPP21Q9UBL0 812 aaPredicted RBP28.09■■■□□ 2.09
GLI3-202ENST00000428534 PHF20L1A8MW92 1017 aa28.08■■■□□ 2.09
GLI3-202ENST00000428534 PICK1Q9NRD5 415 aa28.08■■■□□ 2.09
GLI3-202ENST00000428534 CDK5RAP2Q96SN8 1893 aa28.07■■■□□ 2.08
GLI3-202ENST00000428534 PRKAB2O43741 272 aa28.07■■■□□ 2.08
GLI3-202ENST00000428534 APPP05067 770 aa28.07■■■□□ 2.08
GLI3-202ENST00000428534 INHBEP58166 350 aa28.07■■■□□ 2.08
GLI3-202ENST00000428534 SPRYD7Q5W111 196 aa28.07■■■□□ 2.08
GLI3-202ENST00000428534 CLMNQ96JQ2 1002 aa28.07■■■□□ 2.08
GLI3-202ENST00000428534 ELP3Q9H9T3 547 aa28.07■■■□□ 2.08
GLI3-202ENST00000428534 CA12O43570 354 aa28.06■■■□□ 2.08
GLI3-202ENST00000428534 GSPT1P15170 499 aaKnown RBP28.06■■■□□ 2.08
GLI3-202ENST00000428534 INPP5BP32019 993 aa28.06■■■□□ 2.08
GLI3-202ENST00000428534 SCYL3Q8IZE3 742 aa28.06■■■□□ 2.08
GLI3-202ENST00000428534 ZKSCAN4Q969J2 545 aaPredicted RBP28.06■■■□□ 2.08
GLI3-202ENST00000428534 WNK4Q96J92 1243 aa28.06■■■□□ 2.08
GLI3-202ENST00000428534 SEC62Q99442 399 aaKnown RBP28.06■■■□□ 2.08
GLI3-202ENST00000428534 SWAP70Q9UH65 585 aa28.06■■■□□ 2.08
GLI3-202ENST00000428534 SPDYE5A6NIY4 337 aa28.05■■■□□ 2.08
GLI3-202ENST00000428534 GSG1L2A8MUP6 293 aa28.05■■■□□ 2.08
GLI3-202ENST00000428534 PPATQ06203 517 aa28.05■■■□□ 2.08
GLI3-202ENST00000428534 SREBF2Q12772 1141 aa28.05■■■□□ 2.08
GLI3-202ENST00000428534 SBK1Q52WX2 424 aa28.05■■■□□ 2.08
GLI3-202ENST00000428534 RUFY2Q8WXA3 655 aa28.05■■■□□ 2.08
GLI3-202ENST00000428534 OPTNQ96CV9 577 aa28.05■■■□□ 2.08
GLI3-202ENST00000428534 TBC1D2Q9BYX2 928 aa28.05■■■□□ 2.08
GLI3-202ENST00000428534 SNCAIPQ9Y6H5 919 aa28.05■■■□□ 2.08
GLI3-202ENST00000428534 MANSC4A6NHS7 340 aaPredicted RBP28.04■■■□□ 2.08
GLI3-202ENST00000428534 TDO2P48775 406 aa28.04■■■□□ 2.08
GLI3-202ENST00000428534 NMIQ13287 307 aaPredicted RBP28.04■■■□□ 2.08
GLI3-202ENST00000428534 MYH1P12882 1939 aa28.04■■■□□ 2.08
GLI3-202ENST00000428534 USP17L12C9JPN9 530 aa28.03■■■□□ 2.08
GLI3-202ENST00000428534 USP17L21D6R901 530 aa28.03■■■□□ 2.08
GLI3-202ENST00000428534 CAP2P40123 477 aa28.03■■■□□ 2.08
GLI3-202ENST00000428534 PLCD1P51178 756 aa28.03■■■□□ 2.08
GLI3-202ENST00000428534 KIF23Q02241 960 aaPredicted RBP28.03■■■□□ 2.08
GLI3-202ENST00000428534 C12orf60Q5U649 245 aa28.03■■■□□ 2.08
GLI3-202ENST00000428534 FAM227BQ96M60 508 aa28.03■■■□□ 2.08
GLI3-202ENST00000428534 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.03■■■□□ 2.08
GLI3-202ENST00000428534 PPIL2Q13356 520 aa28.02■■■□□ 2.08
GLI3-202ENST00000428534 TATDN1Q6P1N9 297 aa28.02■■■□□ 2.08
GLI3-202ENST00000428534 CTR9Q6PD62 1173 aa28.02■■■□□ 2.08
GLI3-202ENST00000428534 IFNL3Q8IZI9 196 aa28.02■■■□□ 2.08
GLI3-202ENST00000428534 NAPBQ9H115 298 aa28.02■■■□□ 2.08
GLI3-202ENST00000428534 ZNF287Q9HBT7 754 aa28.02■■■□□ 2.08
GLI3-202ENST00000428534 NAV1Q8NEY1 1877 aa28.02■■■□□ 2.08
GLI3-202ENST00000428534 A0A0D9SFI3 127 aa28.01■■■□□ 2.07
GLI3-202ENST00000428534 ASNSP08243 561 aa28.01■■■□□ 2.07
GLI3-202ENST00000428534 GTF2A2P52657 109 aa28.01■■■□□ 2.07
GLI3-202ENST00000428534 BMP2KLQ5H9B9 411 aa28.01■■■□□ 2.07
GLI3-202ENST00000428534 CWC27Q6UX04 472 aaKnown RBP28.01■■■□□ 2.07
GLI3-202ENST00000428534 CCDC171Q6TFL3 1326 aa28■■■□□ 2.07
GLI3-202ENST00000428534 SLC3A2P08195 630 aaKnown RBP28■■■□□ 2.07
GLI3-202ENST00000428534 GABPAQ06546 454 aa28■■■□□ 2.07
GLI3-202ENST00000428534 SLC4A8Q2Y0W8 1093 aa28■■■□□ 2.07
GLI3-202ENST00000428534 OTUD5Q96G74 571 aa28■■■□□ 2.07
GLI3-202ENST00000428534 RAD50Q92878 1312 aa27.99■■■□□ 2.07
GLI3-202ENST00000428534 CCDC85CA6NKD9 419 aa27.99■■■□□ 2.07
GLI3-202ENST00000428534 FAM196BA6NMK8 535 aa27.99■■■□□ 2.07
GLI3-202ENST00000428534 TM4SF4P48230 202 aa27.99■■■□□ 2.07
GLI3-202ENST00000428534 ALX1Q15699 326 aa27.99■■■□□ 2.07
GLI3-202ENST00000428534 CERKLQ49MI3 558 aaPredicted RBP27.99■■■□□ 2.07
GLI3-202ENST00000428534 AS3MTQ9HBK9 375 aa27.99■■■□□ 2.07
GLI3-202ENST00000428534 CABP5Q9NP86 173 aa27.99■■■□□ 2.07
GLI3-202ENST00000428534 DDX60LQ5H9U9 1706 aaKnown RBP27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms