RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 EHD4Q9H223 541 aa14.81□□□□□ -0.04
TRIM39-207ENST00000428404 CNNM2Q9H8M5 875 aa14.81□□□□□ -0.04
TRIM39-207ENST00000428404 HACL1Q9UJ83 578 aa14.81□□□□□ -0.04
TRIM39-207ENST00000428404 CYP46A1Q9Y6A2 500 aa14.81□□□□□ -0.04
TRIM39-207ENST00000428404 ASTN2O75129 1339 aaPredicted RBP14.81□□□□□ -0.04
TRIM39-207ENST00000428404 CPA1P15085 419 aa14.8□□□□□ -0.04
TRIM39-207ENST00000428404 C16orf86Q6ZW13 317 aa14.8□□□□□ -0.04
TRIM39-207ENST00000428404 DHX32Q7L7V1 743 aaKnown RBP14.8□□□□□ -0.04
TRIM39-207ENST00000428404 FBXL16Q8N461 479 aa14.8□□□□□ -0.04
TRIM39-207ENST00000428404 SNX21Q969T3 373 aa14.8□□□□□ -0.04
TRIM39-207ENST00000428404 DYNLL2Q96FJ2 89 aa14.8□□□□□ -0.04
TRIM39-207ENST00000428404 KRT23Q9C075 422 aa14.8□□□□□ -0.04
TRIM39-207ENST00000428404 VEZTQ9HBM0 779 aa14.8□□□□□ -0.04
TRIM39-207ENST00000428404 PI4KBQ9UBF8 816 aa14.8□□□□□ -0.04
TRIM39-207ENST00000428404 NEDD4P46934 1319 aa14.8□□□□□ -0.04
TRIM39-207ENST00000428404 NAV1Q8NEY1 1877 aa14.8□□□□□ -0.04
TRIM39-207ENST00000428404 NT5C2P49902 561 aa14.79□□□□□ -0.04
TRIM39-207ENST00000428404 PDE4BQ07343 736 aa14.79□□□□□ -0.04
TRIM39-207ENST00000428404 TRDNQ13061 729 aa14.79□□□□□ -0.04
TRIM39-207ENST00000428404 SLC4A8Q2Y0W8 1093 aa14.79□□□□□ -0.04
TRIM39-207ENST00000428404 USP50Q70EL3 339 aaPredicted RBP14.79□□□□□ -0.04
TRIM39-207ENST00000428404 FOXP4Q8IVH2 680 aaPredicted RBP14.79□□□□□ -0.04
TRIM39-207ENST00000428404 WDR19Q8NEZ3 1342 aa14.79□□□□□ -0.04
TRIM39-207ENST00000428404 PITPNM2Q9BZ72 1349 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 IQCA1LA6NCM1 817 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 B4E1Z4 1266 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 CD2BP2O95400 341 aaKnown RBP14.78□□□□□ -0.04
TRIM39-207ENST00000428404 HLA-DOAP06340 250 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 MCM5P33992 734 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 EPHX2P34913 555 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 TNNI2P48788 182 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 CDK8P49336 464 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 ANTXR2P58335 489 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 MAP3K10Q02779 954 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 TNFAIP1Q13829 316 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 RASA3Q14644 834 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 ANGEL2Q5VTE6 544 aaKnown RBP14.78□□□□□ -0.04
TRIM39-207ENST00000428404 CYB5R4Q7L1T6 521 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 RALYLQ86SE5 291 aaKnown RBP14.78□□□□□ -0.04
TRIM39-207ENST00000428404 TEPSINQ96N21 525 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 AGXT2Q9BYV1 514 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 TMEM39BQ9GZU3 492 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 TAF1DQ9H5J8 278 aaPredicted RBP14.78□□□□□ -0.04
TRIM39-207ENST00000428404 PDRG1Q9NUG6 133 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 ZSWIM5Q9P217 1185 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 SERPINB13Q9UIV8 391 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 MYH1P12882 1939 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 WDR90Q96KV7 1748 aa14.78□□□□□ -0.04
TRIM39-207ENST00000428404 ST18O60284 1047 aa14.77□□□□□ -0.05
TRIM39-207ENST00000428404 KDM4AO75164 1064 aa14.77□□□□□ -0.05
TRIM39-207ENST00000428404 RASA1P20936 1047 aa14.77□□□□□ -0.05
TRIM39-207ENST00000428404 ANP32AP39687 249 aaKnown RBP14.77□□□□□ -0.05
TRIM39-207ENST00000428404 APOBEC3FQ8IUX4 373 aaKnown RBP14.77□□□□□ -0.05
TRIM39-207ENST00000428404 STK11IPQ8N1F8 1099 aa14.77□□□□□ -0.05
TRIM39-207ENST00000428404 SLC44A5Q8NCS7 719 aa14.77□□□□□ -0.05
TRIM39-207ENST00000428404 ZC3H15Q8WU90 426 aaKnown RBP14.77□□□□□ -0.05
TRIM39-207ENST00000428404 ESR2Q92731 530 aa14.77□□□□□ -0.05
TRIM39-207ENST00000428404 ZNF287Q9HBT7 754 aa14.77□□□□□ -0.05
TRIM39-207ENST00000428404 SWAP70Q9UH65 585 aa14.77□□□□□ -0.05
TRIM39-207ENST00000428404 LAMB1P07942 1786 aa14.76□□□□□ -0.05
TRIM39-207ENST00000428404 PRC1O43663 620 aa14.76□□□□□ -0.05
TRIM39-207ENST00000428404 TBC1D12O60347 775 aa14.76□□□□□ -0.05
TRIM39-207ENST00000428404 PRDM1O75626 825 aa14.76□□□□□ -0.05
TRIM39-207ENST00000428404 SHMT1P34896 483 aa14.76□□□□□ -0.05
TRIM39-207ENST00000428404 TOB2Q14106 344 aaPredicted RBP14.76□□□□□ -0.05
TRIM39-207ENST00000428404 ZSCAN29Q8IWY8 852 aaPredicted RBP14.76□□□□□ -0.05
TRIM39-207ENST00000428404 IGDCC4Q8TDY8 1250 aa14.76□□□□□ -0.05
TRIM39-207ENST00000428404 CSRNP1Q96S65 589 aa14.76□□□□□ -0.05
TRIM39-207ENST00000428404 MTA3Q9BTC8 594 aa14.76□□□□□ -0.05
TRIM39-207ENST00000428404 DEFB129Q9H1M3 183 aa14.76□□□□□ -0.05
TRIM39-207ENST00000428404 DNAJC18Q9H819 358 aa14.76□□□□□ -0.05
TRIM39-207ENST00000428404 GGA3Q9NZ52 723 aa14.76□□□□□ -0.05
TRIM39-207ENST00000428404 HERC5Q9UII4 1024 aaKnown RBP14.76□□□□□ -0.05
TRIM39-207ENST00000428404 MCM2P49736 904 aa14.75□□□□□ -0.05
TRIM39-207ENST00000428404 AK2P54819 239 aa14.75□□□□□ -0.05
TRIM39-207ENST00000428404 RRP12Q5JTH9 1297 aaKnown RBP14.75□□□□□ -0.05
TRIM39-207ENST00000428404 TATDN1Q6P1N9 297 aa14.75□□□□□ -0.05
TRIM39-207ENST00000428404 CHST3Q7LGC8 479 aa14.75□□□□□ -0.05
TRIM39-207ENST00000428404 CDAN1Q8IWY9 1227 aa14.75□□□□□ -0.05
TRIM39-207ENST00000428404 TCEANC2Q96MN5 208 aa14.75□□□□□ -0.05
TRIM39-207ENST00000428404 TBC1D2Q9BYX2 928 aa14.75□□□□□ -0.05
TRIM39-207ENST00000428404 MKNK2Q9HBH9 465 aa14.75□□□□□ -0.05
TRIM39-207ENST00000428404 SCAF8Q9UPN6 1271 aaKnown RBP14.75□□□□□ -0.05
TRIM39-207ENST00000428404 SCN4AP35499 1836 aa14.75□□□□□ -0.05
TRIM39-207ENST00000428404 RANBP6O60518 1105 aaKnown RBP14.74□□□□□ -0.05
TRIM39-207ENST00000428404 SLURP2P0DP57 97 aa14.74□□□□□ -0.05
TRIM39-207ENST00000428404 EVCP57679 992 aa14.74□□□□□ -0.05
TRIM39-207ENST00000428404 Q6ZUG5 572 aa14.74□□□□□ -0.05
TRIM39-207ENST00000428404 PNMA8AQ86V59 439 aaPredicted RBP14.74□□□□□ -0.05
TRIM39-207ENST00000428404 ZNF444Q8N0Y2 327 aaPredicted RBP14.74□□□□□ -0.05
TRIM39-207ENST00000428404 TMEM87BQ96K49 555 aa14.74□□□□□ -0.05
TRIM39-207ENST00000428404 LRRC2Q9BYS8 371 aa14.74□□□□□ -0.05
TRIM39-207ENST00000428404 TOMM22Q9NS69 142 aa14.74□□□□□ -0.05
TRIM39-207ENST00000428404 TCP11L1Q9NUJ3 509 aa14.74□□□□□ -0.05
TRIM39-207ENST00000428404 PPP2R3BQ9Y5P8 575 aa14.74□□□□□ -0.05
TRIM39-207ENST00000428404 SIPA1L1O43166 1804 aa14.73□□□□□ -0.05
TRIM39-207ENST00000428404 SH2B2O14492 632 aaPredicted RBP14.73□□□□□ -0.05
TRIM39-207ENST00000428404 VEGFAP15692 232 aaPredicted RBP14.73□□□□□ -0.05
TRIM39-207ENST00000428404 LIFRP42702 1097 aa14.73□□□□□ -0.05
TRIM39-207ENST00000428404 TFAP4Q01664 338 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms