RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 EYA2O00167 538 aa12.88□□□□□ -0.35
RDH11-202ENST00000428130 RFX5P48382 616 aaPredicted RBP12.88□□□□□ -0.35
RDH11-202ENST00000428130 ZSCAN29Q8IWY8 852 aaPredicted RBP12.88□□□□□ -0.35
RDH11-202ENST00000428130 PROCA1Q8NCQ7 364 aaPredicted RBP12.88□□□□□ -0.35
RDH11-202ENST00000428130 TRIB2Q92519 343 aa12.88□□□□□ -0.35
RDH11-202ENST00000428130 GUCD1Q96NT3 240 aa12.88□□□□□ -0.35
RDH11-202ENST00000428130 DDX4Q9NQI0 724 aaKnown RBP12.88□□□□□ -0.35
RDH11-202ENST00000428130 MUC3AQ02505 3323 aa12.88□□□□□ -0.35
RDH11-202ENST00000428130 CDK5RAP2Q96SN8 1893 aa12.87□□□□□ -0.35
RDH11-202ENST00000428130 POTEB2H3BUK9 544 aa12.87□□□□□ -0.35
RDH11-202ENST00000428130 GCLCP48506 637 aaPredicted RBP12.87□□□□□ -0.35
RDH11-202ENST00000428130 MAP3K21Q5TCX8 1036 aa12.87□□□□□ -0.35
RDH11-202ENST00000428130 ATG9AQ7Z3C6 839 aa12.87□□□□□ -0.35
RDH11-202ENST00000428130 SALL2Q9Y467 1007 aaPredicted RBP12.87□□□□□ -0.35
RDH11-202ENST00000428130 COL6A1P12109 1028 aa12.86□□□□□ -0.35
RDH11-202ENST00000428130 FAM109BQ6ICB4 259 aaPredicted RBP12.86□□□□□ -0.35
RDH11-202ENST00000428130 DENND2AQ9ULE3 1009 aa12.86□□□□□ -0.35
RDH11-202ENST00000428130 SEMA3EO15041 775 aa12.85□□□□□ -0.35
RDH11-202ENST00000428130 TBC1D12O60347 775 aa12.85□□□□□ -0.35
RDH11-202ENST00000428130 PRKAR2AP13861 404 aaKnown RBP12.85□□□□□ -0.35
RDH11-202ENST00000428130 MDM2Q00987 491 aaPredicted RBP12.85□□□□□ -0.35
RDH11-202ENST00000428130 SPP2Q13103 211 aa12.85□□□□□ -0.35
RDH11-202ENST00000428130 PICALMQ13492 652 aa12.85□□□□□ -0.35
RDH11-202ENST00000428130 USP44Q9H0E7 712 aa12.85□□□□□ -0.35
RDH11-202ENST00000428130 ASCC2Q9H1I8 757 aaPredicted RBP12.85□□□□□ -0.35
RDH11-202ENST00000428130 GNL3LQ9NVN8 582 aaKnown RBP12.85□□□□□ -0.35
RDH11-202ENST00000428130 MORF4L1Q9UBU8 362 aa12.85□□□□□ -0.35
RDH11-202ENST00000428130 U3KPZ7 1027 aaPredicted RBP12.85□□□□□ -0.35
RDH11-202ENST00000428130 FOCADQ5VW36 1801 aa12.85□□□□□ -0.35
RDH11-202ENST00000428130 RLFQ13129 1914 aa12.84□□□□□ -0.35
RDH11-202ENST00000428130 FAM196BA6NMK8 535 aa12.84□□□□□ -0.35
RDH11-202ENST00000428130 ZBTB22O15209 634 aa12.84□□□□□ -0.35
RDH11-202ENST00000428130 CYP2B6P20813 491 aa12.84□□□□□ -0.35
RDH11-202ENST00000428130 PHKA1P46020 1223 aa12.84□□□□□ -0.35
RDH11-202ENST00000428130 HMGCS2P54868 508 aa12.84□□□□□ -0.35
RDH11-202ENST00000428130 PABPC4Q13310 644 aaKnown RBP eCLIP12.84□□□□□ -0.35
RDH11-202ENST00000428130 ATP2B3Q16720 1220 aa12.84□□□□□ -0.35
RDH11-202ENST00000428130 LRRC26Q2I0M4 334 aa12.84□□□□□ -0.35
RDH11-202ENST00000428130 ZNF280CQ8ND82 737 aa12.84□□□□□ -0.35
RDH11-202ENST00000428130 OSBPL5Q9H0X9 879 aaPredicted RBP12.84□□□□□ -0.35
RDH11-202ENST00000428130 BTDP43251 543 aa12.83□□□□□ -0.36
RDH11-202ENST00000428130 SH3D19Q5HYK7 790 aa12.83□□□□□ -0.36
RDH11-202ENST00000428130 ZGPATQ8N5A5 531 aaKnown RBP12.83□□□□□ -0.36
RDH11-202ENST00000428130 FAM163AQ96GL9 167 aaPredicted RBP12.83□□□□□ -0.36
RDH11-202ENST00000428130 TBC1D2Q9BYX2 928 aa12.83□□□□□ -0.36
RDH11-202ENST00000428130 MROH7-TTC4A0A0A0MT08 1334 aa12.83□□□□□ -0.36
RDH11-202ENST00000428130 XRCC5P13010 732 aaKnown RBP12.82□□□□□ -0.36
RDH11-202ENST00000428130 KCNA4P22459 653 aa12.82□□□□□ -0.36
RDH11-202ENST00000428130 RHBDL3P58872 404 aa12.82□□□□□ -0.36
RDH11-202ENST00000428130 CACNB2Q08289 660 aaPredicted RBP12.82□□□□□ -0.36
RDH11-202ENST00000428130 LHX8Q68G74 356 aa12.82□□□□□ -0.36
RDH11-202ENST00000428130 DZIP1Q86YF9 867 aaKnown RBP12.82□□□□□ -0.36
RDH11-202ENST00000428130 FAM161BQ96MY7 647 aa12.82□□□□□ -0.36
RDH11-202ENST00000428130 NUDT12Q9BQG2 462 aa12.82□□□□□ -0.36
RDH11-202ENST00000428130 SIL1Q9H173 461 aa12.82□□□□□ -0.36
RDH11-202ENST00000428130 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.82□□□□□ -0.36
RDH11-202ENST00000428130 FBXO3Q9UK99 471 aa12.82□□□□□ -0.36
RDH11-202ENST00000428130 PEX10O60683 326 aa12.81□□□□□ -0.36
RDH11-202ENST00000428130 CIAO1O76071 339 aa12.81□□□□□ -0.36
RDH11-202ENST00000428130 CCND3P30281 292 aaPredicted RBP12.81□□□□□ -0.36
RDH11-202ENST00000428130 CAP2P40123 477 aa12.81□□□□□ -0.36
RDH11-202ENST00000428130 RASGRF1Q13972 1273 aa12.81□□□□□ -0.36
RDH11-202ENST00000428130 RRP1BQ14684 758 aaKnown RBP12.81□□□□□ -0.36
RDH11-202ENST00000428130 CCDC102BQ68D86 513 aa12.81□□□□□ -0.36
RDH11-202ENST00000428130 SLF2Q8IX21 1173 aa12.81□□□□□ -0.36
RDH11-202ENST00000428130 MRPL50Q8N5N7 158 aaKnown RBP12.81□□□□□ -0.36
RDH11-202ENST00000428130 SOCS4Q8WXH5 440 aa12.81□□□□□ -0.36
RDH11-202ENST00000428130 CEP126Q9P2H0 1117 aa12.81□□□□□ -0.36
RDH11-202ENST00000428130 ABCF2Q9UG63 623 aa12.81□□□□□ -0.36
RDH11-202ENST00000428130 PTPRCP08575 1304 aa12.81□□□□□ -0.36
RDH11-202ENST00000428130 PDS5AQ29RF7 1337 aaKnown RBP12.81□□□□□ -0.36
RDH11-202ENST00000428130 GPR75-ASB3A0A0A6YYF3 556 aa12.8□□□□□ -0.36
RDH11-202ENST00000428130 USP17L5A8MUK1 530 aa12.8□□□□□ -0.36
RDH11-202ENST00000428130 ZKSCAN1P17029 563 aaPredicted RBP12.8□□□□□ -0.36
RDH11-202ENST00000428130 ADORA1P30542 326 aa12.8□□□□□ -0.36
RDH11-202ENST00000428130 ZNF697Q5TEC3 545 aa12.8□□□□□ -0.36
RDH11-202ENST00000428130 TRMT44Q8IYL2 757 aaKnown RBP12.8□□□□□ -0.36
RDH11-202ENST00000428130 ZNF384Q8TF68 577 aa12.8□□□□□ -0.36
RDH11-202ENST00000428130 USP6NLQ92738 828 aa12.8□□□□□ -0.36
RDH11-202ENST00000428130 P2RX7Q99572 595 aaKnown RBP12.8□□□□□ -0.36
RDH11-202ENST00000428130 TXNRD2Q9NNW7 524 aa12.8□□□□□ -0.36
RDH11-202ENST00000428130 MYO5AQ9Y4I1 1855 aaKnown RBP12.79□□□□□ -0.36
RDH11-202ENST00000428130 HOXA7P31268 230 aaPredicted RBP12.79□□□□□ -0.36
RDH11-202ENST00000428130 HERVK_113P62684 666 aa12.79□□□□□ -0.36
RDH11-202ENST00000428130 IRX3P78415 501 aaPredicted RBP12.79□□□□□ -0.36
RDH11-202ENST00000428130 MECOMQ03112 1051 aa12.79□□□□□ -0.36
RDH11-202ENST00000428130 CCL14Q16627 93 aa12.79□□□□□ -0.36
RDH11-202ENST00000428130 GPRC5AQ8NFJ5 357 aa12.79□□□□□ -0.36
RDH11-202ENST00000428130 AS3MTQ9HBK9 375 aa12.79□□□□□ -0.36
RDH11-202ENST00000428130 PRDM6Q9NQX0 595 aa12.79□□□□□ -0.36
RDH11-202ENST00000428130 TTC28Q96AY4 2481 aa12.79□□□□□ -0.36
RDH11-202ENST00000428130 MAPK4P31152 587 aa12.78□□□□□ -0.36
RDH11-202ENST00000428130 IL15P40933 162 aaPredicted RBP12.78□□□□□ -0.36
RDH11-202ENST00000428130 BACE1P56817 501 aa12.78□□□□□ -0.36
RDH11-202ENST00000428130 MTMR2Q13614 643 aa12.78□□□□□ -0.36
RDH11-202ENST00000428130 PDE3AQ14432 1141 aa12.78□□□□□ -0.36
RDH11-202ENST00000428130 MORN1Q5T089 497 aa12.78□□□□□ -0.36
RDH11-202ENST00000428130 SPTY2D1Q68D10 685 aaPredicted RBP12.78□□□□□ -0.36
RDH11-202ENST00000428130 CDX2Q99626 313 aaPredicted RBP12.78□□□□□ -0.36
RDH11-202ENST00000428130 LBHD1Q9BQE6 289 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms