RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 MMP1P03956 469 aa22.26■■□□□ 1.15
SNX17-202ENST00000427123 SAFBQ15424 915 aaKnown RBP eCLIP22.26■■□□□ 1.15
SNX17-202ENST00000427123 SEC23AQ15436 765 aa22.26■■□□□ 1.15
SNX17-202ENST00000427123 ZRSR1Q15695 479 aaKnown RBP22.26■■□□□ 1.15
SNX17-202ENST00000427123 NBPF11Q86T75 865 aa22.26■■□□□ 1.15
SNX17-202ENST00000427123 STK11IPQ8N1F8 1099 aa22.26■■□□□ 1.15
SNX17-202ENST00000427123 TIGD1Q96MW7 591 aa22.26■■□□□ 1.15
SNX17-202ENST00000427123 TNRC6CQ9HCJ0 1690 aaKnown RBP22.26■■□□□ 1.15
SNX17-202ENST00000427123 MYH6P13533 1939 aa22.26■■□□□ 1.15
SNX17-202ENST00000427123 CCDC88AQ3V6T2 1871 aa22.26■■□□□ 1.15
SNX17-202ENST00000427123 KIAA1551Q9HCM1 1747 aa22.25■■□□□ 1.15
SNX17-202ENST00000427123 TNKSO95271 1327 aa22.25■■□□□ 1.15
SNX17-202ENST00000427123 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.25■■□□□ 1.15
SNX17-202ENST00000427123 MARCKSP29966 332 aaPredicted RBP22.25■■□□□ 1.15
SNX17-202ENST00000427123 DYNLL1P63167 89 aaKnown RBP22.25■■□□□ 1.15
SNX17-202ENST00000427123 PPP2R5BQ15173 497 aa22.25■■□□□ 1.15
SNX17-202ENST00000427123 FAM237AA0A1B0GTK4 181 aa22.24■■□□□ 1.15
SNX17-202ENST00000427123 UBE2Q2LH0YL09 131 aa22.24■■□□□ 1.15
SNX17-202ENST00000427123 SLC3A2P08195 630 aaKnown RBP22.24■■□□□ 1.15
SNX17-202ENST00000427123 KLRK1P26718 216 aa22.24■■□□□ 1.15
SNX17-202ENST00000427123 TMED8Q6PL24 325 aaPredicted RBP22.24■■□□□ 1.15
SNX17-202ENST00000427123 NOSTRINQ8IVI9 506 aa22.24■■□□□ 1.15
SNX17-202ENST00000427123 CRACR2BQ8N4Y2 399 aaPredicted RBP22.24■■□□□ 1.15
SNX17-202ENST00000427123 FANCBQ8NB91 859 aa22.24■■□□□ 1.15
SNX17-202ENST00000427123 ZNF384Q8TF68 577 aa22.24■■□□□ 1.15
SNX17-202ENST00000427123 MRFAP1L1Q96HT8 127 aa22.24■■□□□ 1.15
SNX17-202ENST00000427123 PYCARDQ9ULZ3 195 aa22.24■■□□□ 1.15
SNX17-202ENST00000427123 MYH2Q9UKX2 1941 aa22.24■■□□□ 1.15
SNX17-202ENST00000427123 HIBADHP31937 336 aaKnown RBP22.24■■□□□ 1.15
SNX17-202ENST00000427123 NSUN4Q96CB9 384 aaKnown RBP22.24■■□□□ 1.15
SNX17-202ENST00000427123 BPIFA3Q9BQP9 254 aa22.24■■□□□ 1.15
SNX17-202ENST00000427123 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.24■■□□□ 1.15
SNX17-202ENST00000427123 CLIP2Q9UDT6 1046 aa22.24■■□□□ 1.15
SNX17-202ENST00000427123 HPSEQ9Y251 543 aa22.24■■□□□ 1.15
SNX17-202ENST00000427123 UBAP1LF5GYI3 381 aa22.23■■□□□ 1.15
SNX17-202ENST00000427123 ZBTB22O15209 634 aa22.23■■□□□ 1.15
SNX17-202ENST00000427123 GUCY1A2P33402 732 aa22.23■■□□□ 1.15
SNX17-202ENST00000427123 DNTTIP2Q5QJE6 756 aaKnown RBP22.23■■□□□ 1.15
SNX17-202ENST00000427123 CCDC186Q7Z3E2 898 aa22.23■■□□□ 1.15
SNX17-202ENST00000427123 C17orf53Q8N3J3 647 aaPredicted RBP22.23■■□□□ 1.15
SNX17-202ENST00000427123 NUP133Q8WUM0 1156 aa22.23■■□□□ 1.15
SNX17-202ENST00000427123 ERCC4Q92889 916 aaPredicted RBP22.23■■□□□ 1.15
SNX17-202ENST00000427123 FOXP1Q9H334 677 aaPredicted RBP22.23■■□□□ 1.15
SNX17-202ENST00000427123 TAOK2Q9UL54 1235 aa22.23■■□□□ 1.15
SNX17-202ENST00000427123 SBF2Q86WG5 1849 aa22.23■■□□□ 1.15
SNX17-202ENST00000427123 CUTAO60888 179 aa22.23■■□□□ 1.15
SNX17-202ENST00000427123 FGRP09769 529 aa22.23■■□□□ 1.15
SNX17-202ENST00000427123 ZSCAN10Q96SZ4 725 aaPredicted RBP22.23■■□□□ 1.15
SNX17-202ENST00000427123 USP21Q9UK80 565 aa22.23■■□□□ 1.15
SNX17-202ENST00000427123 A0A087WWV3 80 aa22.22■■□□□ 1.15
SNX17-202ENST00000427123 SYKP43405 635 aa22.22■■□□□ 1.15
SNX17-202ENST00000427123 RBM6P78332 1123 aaKnown RBP22.22■■□□□ 1.15
SNX17-202ENST00000427123 RESP18Q5W5W9 173 aa22.22■■□□□ 1.15
SNX17-202ENST00000427123 DIS3L2Q8IYB7 885 aaKnown RBP22.22■■□□□ 1.15
SNX17-202ENST00000427123 AOPEPQ8N6M6 819 aa22.22■■□□□ 1.15
SNX17-202ENST00000427123 MECOMQ03112 1051 aa22.21■■□□□ 1.15
SNX17-202ENST00000427123 SHC4Q6S5L8 630 aa22.21■■□□□ 1.15
SNX17-202ENST00000427123 ARHGEF1Q92888 912 aaKnown RBP22.21■■□□□ 1.15
SNX17-202ENST00000427123 RNF26Q9BY78 433 aaPredicted RBP22.21■■□□□ 1.15
SNX17-202ENST00000427123 NLRP12P59046 1061 aa22.21■■□□□ 1.15
SNX17-202ENST00000427123 CTR9Q6PD62 1173 aa22.21■■□□□ 1.15
SNX17-202ENST00000427123 ENAHQ8N8S7 591 aaPredicted RBP22.21■■□□□ 1.15
SNX17-202ENST00000427123 CRNKL1Q9BZJ0 848 aaKnown RBP22.21■■□□□ 1.15
SNX17-202ENST00000427123 TFCP2L1Q9NZI6 479 aa22.21■■□□□ 1.15
SNX17-202ENST00000427123 BTBD18B2RXH4 712 aa22.2■■□□□ 1.14
SNX17-202ENST00000427123 DPCR1Q3MIW9 517 aa22.2■■□□□ 1.14
SNX17-202ENST00000427123 SPATA31A6Q5VVP1 1343 aa22.2■■□□□ 1.14
SNX17-202ENST00000427123 UQCRHLA0A096LP55 91 aa22.19■■□□□ 1.14
SNX17-202ENST00000427123 UQCRHP07919 91 aa22.19■■□□□ 1.14
SNX17-202ENST00000427123 TM4SF1P30408 202 aa22.19■■□□□ 1.14
SNX17-202ENST00000427123 RILPL1Q5EBL4 403 aa22.19■■□□□ 1.14
SNX17-202ENST00000427123 IQCA1Q86XH1 822 aa22.19■■□□□ 1.14
SNX17-202ENST00000427123 NRBP1Q9UHY1 535 aa22.19■■□□□ 1.14
SNX17-202ENST00000427123 KCNJ14Q9UNX9 436 aa22.19■■□□□ 1.14
SNX17-202ENST00000427123 CYP2D7A0A087X1C5 515 aa22.19■■□□□ 1.14
SNX17-202ENST00000427123 IFIT1BQ5T764 474 aaKnown RBP22.19■■□□□ 1.14
SNX17-202ENST00000427123 CATIPQ7Z7H3 387 aa22.19■■□□□ 1.14
SNX17-202ENST00000427123 KRI1Q8N9T8 703 aaKnown RBP22.19■■□□□ 1.14
SNX17-202ENST00000427123 RBM28Q9NW13 759 aaKnown RBP22.19■■□□□ 1.14
SNX17-202ENST00000427123 SMIM22K7EJ46 135 aa22.18■■□□□ 1.14
SNX17-202ENST00000427123 CALM1P0DP23 149 aa22.18■■□□□ 1.14
SNX17-202ENST00000427123 CALM2P0DP24 149 aa22.18■■□□□ 1.14
SNX17-202ENST00000427123 CALM3P0DP25 149 aa22.18■■□□□ 1.14
SNX17-202ENST00000427123 AMIGO3Q86WK7 504 aa22.18■■□□□ 1.14
SNX17-202ENST00000427123 FBXW7Q969H0 707 aa22.18■■□□□ 1.14
SNX17-202ENST00000427123 PRIMPOLQ96LW4 560 aa22.18■■□□□ 1.14
SNX17-202ENST00000427123 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.18■■□□□ 1.14
SNX17-202ENST00000427123 IRS2Q9Y4H2 1338 aa22.18■■□□□ 1.14
SNX17-202ENST00000427123 ORC4O43929 436 aa22.18■■□□□ 1.14
SNX17-202ENST00000427123 AKAP17AQ02040 695 aaKnown RBP22.18■■□□□ 1.14
SNX17-202ENST00000427123 CHAF1AQ13111 956 aaPredicted RBP22.18■■□□□ 1.14
SNX17-202ENST00000427123 CMTR1Q8N1G2 835 aaKnown RBP22.18■■□□□ 1.14
SNX17-202ENST00000427123 CCDC24Q8N4L8 307 aa22.18■■□□□ 1.14
SNX17-202ENST00000427123 CCDC82Q8N4S0 544 aa22.18■■□□□ 1.14
SNX17-202ENST00000427123 ATP8A2Q9NTI2 1148 aa22.18■■□□□ 1.14
SNX17-202ENST00000427123 USP17L12C9JPN9 530 aa22.17■■□□□ 1.14
SNX17-202ENST00000427123 USP17L21D6R901 530 aa22.17■■□□□ 1.14
SNX17-202ENST00000427123 NPHP1O15259 732 aa22.17■■□□□ 1.14
SNX17-202ENST00000427123 IGSF3O75054 1194 aa22.17■■□□□ 1.14
SNX17-202ENST00000427123 DDAH1O94760 285 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms