RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 ZNF654Q8IZM8 581 aa15.68■□□□□ 0.1
RPL28-202ENST00000426763 DNAJC25Q9H1X3 360 aa15.68■□□□□ 0.1
RPL28-202ENST00000426763 DLC1Q96QB1 1528 aa15.68■□□□□ 0.1
RPL28-202ENST00000426763 ARID4AP29374 1257 aaPredicted RBP15.68■□□□□ 0.1
RPL28-202ENST00000426763 CCDC93Q567U6 631 aa15.68■□□□□ 0.1
RPL28-202ENST00000426763 SUSD4Q5VX71 490 aa15.68■□□□□ 0.1
RPL28-202ENST00000426763 GRAPQ13588 217 aa15.68■□□□□ 0.1
RPL28-202ENST00000426763 USH1GQ495M9 461 aa15.68■□□□□ 0.1
RPL28-202ENST00000426763 NSMFQ6X4W1 530 aa15.68■□□□□ 0.1
RPL28-202ENST00000426763 SULF1Q8IWU6 871 aa15.68■□□□□ 0.1
RPL28-202ENST00000426763 GRAPLQ8TC17 118 aaPredicted RBP15.68■□□□□ 0.1
RPL28-202ENST00000426763 PHKBQ93100 1093 aa15.68■□□□□ 0.1
RPL28-202ENST00000426763 MED14O60244 1454 aa15.68■□□□□ 0.1
RPL28-202ENST00000426763 URI1O94763 535 aaPredicted RBP15.68■□□□□ 0.1
RPL28-202ENST00000426763 PCP11498 1178 aaKnown RBP15.68■□□□□ 0.1
RPL28-202ENST00000426763 MYCLP12524 364 aaPredicted RBP15.68■□□□□ 0.1
RPL28-202ENST00000426763 NOP2P46087 812 aaKnown RBP15.68■□□□□ 0.1
RPL28-202ENST00000426763 CERKLQ49MI3 558 aaPredicted RBP15.68■□□□□ 0.1
RPL28-202ENST00000426763 SEC62Q99442 399 aaKnown RBP15.68■□□□□ 0.1
RPL28-202ENST00000426763 ATP8A2Q9NTI2 1148 aa15.68■□□□□ 0.1
RPL28-202ENST00000426763 PPP1R2P41236 205 aa15.67■□□□□ 0.1
RPL28-202ENST00000426763 IFI16Q16666 785 aaKnown RBP15.67■□□□□ 0.1
RPL28-202ENST00000426763 CHMP2AO43633 222 aa15.67■□□□□ 0.1
RPL28-202ENST00000426763 MMP10P09238 476 aa15.67■□□□□ 0.1
RPL28-202ENST00000426763 ADRA2BP18089 450 aa15.67■□□□□ 0.1
RPL28-202ENST00000426763 DNA2P51530 1060 aa15.67■□□□□ 0.1
RPL28-202ENST00000426763 KRT40Q6A162 431 aa15.67■□□□□ 0.1
RPL28-202ENST00000426763 APBB1IPQ7Z5R6 666 aaPredicted RBP15.67■□□□□ 0.1
RPL28-202ENST00000426763 LUZP1Q86V48 1076 aa15.67■□□□□ 0.1
RPL28-202ENST00000426763 GBP3Q9H0R5 595 aa15.67■□□□□ 0.1
RPL28-202ENST00000426763 NARFQ9UHQ1 456 aa15.67■□□□□ 0.1
RPL28-202ENST00000426763 TYRO3Q06418 890 aa15.66■□□□□ 0.1
RPL28-202ENST00000426763 TMCO5BA8MYB1 307 aa15.66■□□□□ 0.1
RPL28-202ENST00000426763 KIFC2Q96AC6 838 aa15.66■□□□□ 0.1
RPL28-202ENST00000426763 CFBP00751 764 aa15.66■□□□□ 0.1
RPL28-202ENST00000426763 CTNNA2P26232 953 aa15.66■□□□□ 0.1
RPL28-202ENST00000426763 PTH1RQ03431 593 aa15.66■□□□□ 0.1
RPL28-202ENST00000426763 FAM160A1Q05DH4 1040 aa15.66■□□□□ 0.1
RPL28-202ENST00000426763 HSP90AA4PQ58FG1 418 aa15.66■□□□□ 0.1
RPL28-202ENST00000426763 SMCR8Q8TEV9 937 aaPredicted RBP15.66■□□□□ 0.1
RPL28-202ENST00000426763 TRMT1Q9NXH9 659 aaKnown RBP15.66■□□□□ 0.1
RPL28-202ENST00000426763 SPATA31A6Q5VVP1 1343 aa15.66■□□□□ 0.1
RPL28-202ENST00000426763 MACROD2A1Z1Q3 448 aa15.66■□□□□ 0.1
RPL28-202ENST00000426763 RPL13P26373 211 aaKnown RBP15.66■□□□□ 0.1
RPL28-202ENST00000426763 TXKP42681 527 aa15.66■□□□□ 0.1
RPL28-202ENST00000426763 CTNNBL1Q8WYA6 563 aaPredicted RBP15.66■□□□□ 0.1
RPL28-202ENST00000426763 ZNF274Q96GC6 653 aaPredicted RBP15.66■□□□□ 0.1
RPL28-202ENST00000426763 CENPHQ9H3R5 247 aa15.66■□□□□ 0.1
RPL28-202ENST00000426763 PTPRMP28827 1452 aa15.66■□□□□ 0.1
RPL28-202ENST00000426763 FGAP02671 866 aa15.66■□□□□ 0.1
RPL28-202ENST00000426763 CYLC1P35663 651 aaPredicted RBP15.66■□□□□ 0.1
RPL28-202ENST00000426763 SLC27A3Q5K4L6 730 aa15.66■□□□□ 0.1
RPL28-202ENST00000426763 H7C1W4 665 aa15.65■□□□□ 0.1
RPL28-202ENST00000426763 NOP56O00567 594 aaKnown RBP15.65■□□□□ 0.1
RPL28-202ENST00000426763 ATF5Q9Y2D1 282 aaPredicted RBP15.65■□□□□ 0.1
RPL28-202ENST00000426763 EHBP1Q8NDI1 1231 aa15.65■□□□□ 0.1
RPL28-202ENST00000426763 SYNCQ9H7C4 482 aa15.65■□□□□ 0.1
RPL28-202ENST00000426763 HOMER2Q9NSB8 354 aa15.65■□□□□ 0.1
RPL28-202ENST00000426763 A0A1B0GVL5 298 aa15.65■□□□□ 0.1
RPL28-202ENST00000426763 TNNT1P13805 278 aa15.65■□□□□ 0.1
RPL28-202ENST00000426763 REXO1Q8N1G1 1221 aaKnown RBP15.65■□□□□ 0.1
RPL28-202ENST00000426763 BEGAINQ9BUH8 593 aa15.65■□□□□ 0.1
RPL28-202ENST00000426763 GPHNQ9NQX3 736 aaPredicted RBP15.65■□□□□ 0.1
RPL28-202ENST00000426763 CUTAO60888 179 aa15.65■□□□□ 0.1
RPL28-202ENST00000426763 GBP2P32456 591 aaPredicted RBP15.65■□□□□ 0.1
RPL28-202ENST00000426763 DALRD3Q5D0E6 543 aaKnown RBP15.65■□□□□ 0.1
RPL28-202ENST00000426763 MASTLQ96GX5 879 aa15.65■□□□□ 0.1
RPL28-202ENST00000426763 BSDC1Q9NW68 430 aaPredicted RBP15.65■□□□□ 0.1
RPL28-202ENST00000426763 TLR7Q9NYK1 1049 aaKnown RBP15.65■□□□□ 0.1
RPL28-202ENST00000426763 PTPN12Q05209 780 aaKnown RBP15.64■□□□□ 0.09
RPL28-202ENST00000426763 ZMYM1Q5SVZ6 1142 aa15.64■□□□□ 0.09
RPL28-202ENST00000426763 OTUD7BQ6GQQ9 843 aa15.64■□□□□ 0.09
RPL28-202ENST00000426763 DBNDD1Q9H9R9 158 aa15.64■□□□□ 0.09
RPL28-202ENST00000426763 COL15A1P39059 1388 aa15.64■□□□□ 0.09
RPL28-202ENST00000426763 PIK3C2BO00750 1634 aa15.64■□□□□ 0.09
RPL28-202ENST00000426763 TNKSO95271 1327 aa15.64■□□□□ 0.09
RPL28-202ENST00000426763 ICA1Q05084 483 aa15.64■□□□□ 0.09
RPL28-202ENST00000426763 SMTNP53814 917 aa15.64■□□□□ 0.09
RPL28-202ENST00000426763 TTLL11Q8NHH1 800 aa15.64■□□□□ 0.09
RPL28-202ENST00000426763 FAM212AQ96EL1 285 aa15.64■□□□□ 0.09
RPL28-202ENST00000426763 MED23Q9ULK4 1368 aa15.64■□□□□ 0.09
RPL28-202ENST00000426763 DIP2BQ9P265 1576 aa15.64■□□□□ 0.09
RPL28-202ENST00000426763 PABPC4Q13310 644 aaKnown RBP eCLIP15.64■□□□□ 0.091e-9■■■■■ 33.4
RPL28-202ENST00000426763 RTKN2Q8IZC4 609 aa15.64■□□□□ 0.09
RPL28-202ENST00000426763 PNMA1Q8ND90 353 aa15.64■□□□□ 0.09
RPL28-202ENST00000426763 HLFQ16534 295 aa15.64■□□□□ 0.09
RPL28-202ENST00000426763 MCTP2Q6DN12 878 aa15.64■□□□□ 0.09
RPL28-202ENST00000426763 NCAPH2Q6IBW4 605 aa15.64■□□□□ 0.09
RPL28-202ENST00000426763 NEXMIFQ5QGS0 1516 aa15.63■□□□□ 0.09
RPL28-202ENST00000426763 STX17P56962 302 aa15.63■□□□□ 0.09
RPL28-202ENST00000426763 TTLL6Q8N841 843 aa15.63■□□□□ 0.09
RPL28-202ENST00000426763 GTF3C6Q969F1 213 aa15.63■□□□□ 0.09
RPL28-202ENST00000426763 OSBPL3Q9H4L5 887 aa15.63■□□□□ 0.09
RPL28-202ENST00000426763 PNMA2Q9UL42 364 aa15.63■□□□□ 0.09
RPL28-202ENST00000426763 KCNH3Q9ULD8 1083 aa15.63■□□□□ 0.09
RPL28-202ENST00000426763 MCM3P25205 808 aa15.63■□□□□ 0.09
RPL28-202ENST00000426763 CCDC17Q96LX7 622 aa15.63■□□□□ 0.09
RPL28-202ENST00000426763 LRWD1Q9UFC0 647 aa15.63■□□□□ 0.09
RPL28-202ENST00000426763 SWAP70Q9UH65 585 aa15.63■□□□□ 0.09
RPL28-202ENST00000426763 MRVI1Q9Y6F6 885 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms