RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.62■□□□□ 0.41
NCKIPSD-205ENST00000426678 R3HDMLQ9H3Y0 253 aa17.62■□□□□ 0.41
NCKIPSD-205ENST00000426678 ZNF532Q9HCE3 1301 aa17.62■□□□□ 0.41
NCKIPSD-205ENST00000426678 MYH1P12882 1939 aa17.61■□□□□ 0.41
NCKIPSD-205ENST00000426678 MYH7P12883 1935 aa17.61■□□□□ 0.41
NCKIPSD-205ENST00000426678 MAGEB6P1A0A0J9YX57 407 aa17.61■□□□□ 0.41
NCKIPSD-205ENST00000426678 AAMPQ13685 434 aa17.61■□□□□ 0.41
NCKIPSD-205ENST00000426678 FAM43AQ8N2R8 423 aa17.61■□□□□ 0.41
NCKIPSD-205ENST00000426678 CRACR2BQ8N4Y2 399 aaPredicted RBP17.61■□□□□ 0.41
NCKIPSD-205ENST00000426678 ZBTB47Q9UFB7 747 aaPredicted RBP17.61■□□□□ 0.41
NCKIPSD-205ENST00000426678 SAP30BPQ9UHR5 308 aaKnown RBP17.61■□□□□ 0.41
NCKIPSD-205ENST00000426678 KCNH4Q9UQ05 1017 aa17.61■□□□□ 0.41
NCKIPSD-205ENST00000426678 ZHX2Q9Y6X8 837 aa17.61■□□□□ 0.41
NCKIPSD-205ENST00000426678 SIPA1L1O43166 1804 aa17.61■□□□□ 0.41
NCKIPSD-205ENST00000426678 ATAD5Q96QE3 1844 aa17.61■□□□□ 0.41
NCKIPSD-205ENST00000426678 PTPRAP18433 802 aa17.6■□□□□ 0.41
NCKIPSD-205ENST00000426678 RIOK1Q9BRS2 568 aaKnown RBP17.6■□□□□ 0.41
NCKIPSD-205ENST00000426678 ZFYVE28Q9HCC9 887 aa17.6■□□□□ 0.41
NCKIPSD-205ENST00000426678 ZCCHC17Q9NP64 241 aaKnown RBP17.6■□□□□ 0.41
NCKIPSD-205ENST00000426678 PALD1Q9ULE6 856 aa17.6■□□□□ 0.41
NCKIPSD-205ENST00000426678 NAV1Q8NEY1 1877 aa17.59■□□□□ 0.41
NCKIPSD-205ENST00000426678 BTBD19C9JJ37 291 aa17.59■□□□□ 0.41
NCKIPSD-205ENST00000426678 CXCL11O14625 94 aa17.59■□□□□ 0.41
NCKIPSD-205ENST00000426678 CRNKL1Q9BZJ0 848 aaKnown RBP17.59■□□□□ 0.41
NCKIPSD-205ENST00000426678 TCRBV5S4A2TA0A5A2 114 aa17.58■□□□□ 0.4
NCKIPSD-205ENST00000426678 ADD2P35612 726 aa17.58■□□□□ 0.4
NCKIPSD-205ENST00000426678 SLC4A8Q2Y0W8 1093 aa17.58■□□□□ 0.4
NCKIPSD-205ENST00000426678 ZSCAN25Q6NSZ9 544 aa17.58■□□□□ 0.4
NCKIPSD-205ENST00000426678 FOXP4Q8IVH2 680 aaPredicted RBP17.58■□□□□ 0.4
NCKIPSD-205ENST00000426678 PHIPQ8WWQ0 1821 aa17.57■□□□□ 0.4
NCKIPSD-205ENST00000426678 CAP2P40123 477 aa17.57■□□□□ 0.4
NCKIPSD-205ENST00000426678 HDAC1Q13547 482 aaPredicted RBP17.57■□□□□ 0.4
NCKIPSD-205ENST00000426678 TSHZ3Q63HK5 1081 aa17.57■□□□□ 0.4
NCKIPSD-205ENST00000426678 ANKRD23Q86SG2 305 aa17.57■□□□□ 0.4
NCKIPSD-205ENST00000426678 ERO1AQ96HE7 468 aa17.57■□□□□ 0.4
NCKIPSD-205ENST00000426678 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.57■□□□□ 0.4
NCKIPSD-205ENST00000426678 DDX60LQ5H9U9 1706 aaKnown RBP17.56■□□□□ 0.4
NCKIPSD-205ENST00000426678 TTC41PQ6P2S7 1318 aa17.56■□□□□ 0.4
NCKIPSD-205ENST00000426678 TRIM75PA6NK02 468 aa17.56■□□□□ 0.4
NCKIPSD-205ENST00000426678 ERC2O15083 957 aa17.56■□□□□ 0.4
NCKIPSD-205ENST00000426678 SP3Q02447 781 aa17.56■□□□□ 0.4
NCKIPSD-205ENST00000426678 PKN2Q16513 984 aaKnown RBP17.56■□□□□ 0.4
NCKIPSD-205ENST00000426678 FASTKD5Q7L8L6 764 aaKnown RBP17.56■□□□□ 0.4
NCKIPSD-205ENST00000426678 TTC6Q86TZ1 520 aa17.56■□□□□ 0.4
NCKIPSD-205ENST00000426678 CCDC84Q86UT8 332 aaPredicted RBP17.56■□□□□ 0.4
NCKIPSD-205ENST00000426678 LCORLQ8N3X6 602 aa17.56■□□□□ 0.4
NCKIPSD-205ENST00000426678 GCC1Q96CN9 775 aa17.56■□□□□ 0.4
NCKIPSD-205ENST00000426678 TBC1D2Q9BYX2 928 aa17.56■□□□□ 0.4
NCKIPSD-205ENST00000426678 AFG3L2Q9Y4W6 797 aa17.56■□□□□ 0.4
NCKIPSD-205ENST00000426678 PTPRFP10586 1907 aa17.56■□□□□ 0.4
NCKIPSD-205ENST00000426678 A0A0G2JLL6 359 aaPredicted RBP17.55■□□□□ 0.4
NCKIPSD-205ENST00000426678 PDHXO00330 501 aa17.55■□□□□ 0.4
NCKIPSD-205ENST00000426678 MBD4O95243 580 aa17.55■□□□□ 0.4
NCKIPSD-205ENST00000426678 UBE3CQ15386 1083 aa17.55■□□□□ 0.4
NCKIPSD-205ENST00000426678 ANKRD45Q5TZF3 282 aa17.55■□□□□ 0.4
NCKIPSD-205ENST00000426678 GADL1Q6ZQY3 521 aa17.55■□□□□ 0.4
NCKIPSD-205ENST00000426678 PRRT2Q7Z6L0 340 aaPredicted RBP17.55■□□□□ 0.4
NCKIPSD-205ENST00000426678 METTL16Q86W50 562 aaKnown RBP17.55■□□□□ 0.4
NCKIPSD-205ENST00000426678 DNAJC18Q9H819 358 aa17.55■□□□□ 0.4
NCKIPSD-205ENST00000426678 ARMT1Q9H993 441 aa17.55■□□□□ 0.4
NCKIPSD-205ENST00000426678 AS3MTQ9HBK9 375 aa17.55■□□□□ 0.4
NCKIPSD-205ENST00000426678 SERPINB13Q9UIV8 391 aa17.55■□□□□ 0.4
NCKIPSD-205ENST00000426678 SUPT16HQ9Y5B9 1047 aaKnown RBP17.55■□□□□ 0.4
NCKIPSD-205ENST00000426678 CCDC85CA6NKD9 419 aa17.54■□□□□ 0.4
NCKIPSD-205ENST00000426678 USP17L5A8MUK1 530 aa17.54■□□□□ 0.4
NCKIPSD-205ENST00000426678 TLR2O60603 784 aa17.54■□□□□ 0.4
NCKIPSD-205ENST00000426678 POLR3DP05423 398 aaPredicted RBP17.54■□□□□ 0.4
NCKIPSD-205ENST00000426678 ASNSP08243 561 aa17.54■□□□□ 0.4
NCKIPSD-205ENST00000426678 MOGSQ13724 837 aa17.54■□□□□ 0.4
NCKIPSD-205ENST00000426678 RRP1BQ14684 758 aaKnown RBP17.54■□□□□ 0.4
NCKIPSD-205ENST00000426678 SLFNL1Q499Z3 407 aa17.54■□□□□ 0.4
NCKIPSD-205ENST00000426678 KBTBD3Q8NAB2 608 aa17.54■□□□□ 0.4
NCKIPSD-205ENST00000426678 EXOC6Q8TAG9 804 aa17.54■□□□□ 0.4
NCKIPSD-205ENST00000426678 CD99L2Q8TCZ2 262 aa17.54■□□□□ 0.4
NCKIPSD-205ENST00000426678 PARK7Q99497 189 aaKnown RBP17.54■□□□□ 0.4
NCKIPSD-205ENST00000426678 EHD4Q9H223 541 aa17.54■□□□□ 0.4
NCKIPSD-205ENST00000426678 TRIM17Q9Y577 477 aa17.54■□□□□ 0.4
NCKIPSD-205ENST00000426678 GLRX3O76003 335 aaKnown RBP17.53■□□□□ 0.4
NCKIPSD-205ENST00000426678 GDF11O95390 407 aa17.53■□□□□ 0.4
NCKIPSD-205ENST00000426678 MX1P20591 662 aa17.53■□□□□ 0.4
NCKIPSD-205ENST00000426678 SPP2Q13103 211 aa17.53■□□□□ 0.4
NCKIPSD-205ENST00000426678 ZNF280CQ8ND82 737 aa17.53■□□□□ 0.4
NCKIPSD-205ENST00000426678 OTUD7AQ8TE49 926 aaPredicted RBP17.53■□□□□ 0.4
NCKIPSD-205ENST00000426678 SDR42E1Q8WUS8 393 aa17.53■□□□□ 0.4
NCKIPSD-205ENST00000426678 RWDD1Q9H446 243 aaPredicted RBP17.53■□□□□ 0.4
NCKIPSD-205ENST00000426678 GINM1Q9NU53 330 aa17.53■□□□□ 0.4
NCKIPSD-205ENST00000426678 MCM9Q9NXL9 1143 aa17.53■□□□□ 0.4
NCKIPSD-205ENST00000426678 ARHGEF6Q15052 776 aa17.52■□□□□ 0.4
NCKIPSD-205ENST00000426678 LRRFIP1Q32MZ4 808 aaKnown RBP17.52■□□□□ 0.4
NCKIPSD-205ENST00000426678 GPAT2Q6NUI2 795 aa17.52■□□□□ 0.4
NCKIPSD-205ENST00000426678 FBXO46Q6PJ61 603 aaPredicted RBP17.52■□□□□ 0.4
NCKIPSD-205ENST00000426678 DDRGK1Q96HY6 314 aa17.52■□□□□ 0.4
NCKIPSD-205ENST00000426678 DCP1AQ9NPI6 582 aaPredicted RBP17.52■□□□□ 0.4
NCKIPSD-205ENST00000426678 ZBTB21Q9ULJ3 1066 aa17.52■□□□□ 0.4
NCKIPSD-205ENST00000426678 CHGBP05060 677 aa17.51■□□□□ 0.39
NCKIPSD-205ENST00000426678 KIF22Q14807 665 aa17.51■□□□□ 0.39
NCKIPSD-205ENST00000426678 OTOP1Q7RTM1 612 aa17.51■□□□□ 0.39
NCKIPSD-205ENST00000426678 AMOTL1Q8IY63 956 aa17.51■□□□□ 0.39
NCKIPSD-205ENST00000426678 PI4K2BQ8TCG2 481 aa17.51■□□□□ 0.39
NCKIPSD-205ENST00000426678 EFCC1Q9HA90 598 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms