RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 EXOSC10Q01780 885 aaKnown RBP18.65■□□□□ 0.58
SCRN1-205ENST00000425819 CYB5R4Q7L1T6 521 aa18.65■□□□□ 0.58
SCRN1-205ENST00000425819 TTC6Q86TZ1 520 aa18.65■□□□□ 0.58
SCRN1-205ENST00000425819 ZSCAN29Q8IWY8 852 aaPredicted RBP18.65■□□□□ 0.58
SCRN1-205ENST00000425819 LARP6Q9BRS8 491 aaKnown RBP18.65■□□□□ 0.58
SCRN1-205ENST00000425819 LAMB1P07942 1786 aa18.65■□□□□ 0.58
SCRN1-205ENST00000425819 ECM29Q5VYK3 1845 aa18.65■□□□□ 0.58
SCRN1-205ENST00000425819 ROBO3Q96MS0 1386 aa18.65■□□□□ 0.58
SCRN1-205ENST00000425819 PRC1O43663 620 aa18.64■□□□□ 0.58
SCRN1-205ENST00000425819 LMOD1P29536 600 aaPredicted RBP18.64■□□□□ 0.58
SCRN1-205ENST00000425819 MCM5P33992 734 aa18.64■□□□□ 0.58
SCRN1-205ENST00000425819 ANTXR2P58335 489 aa18.64■□□□□ 0.58
SCRN1-205ENST00000425819 PDE4BQ07343 736 aa18.64■□□□□ 0.58
SCRN1-205ENST00000425819 Q6ZUG5 572 aa18.64■□□□□ 0.58
SCRN1-205ENST00000425819 SLC44A5Q8NCS7 719 aa18.64■□□□□ 0.58
SCRN1-205ENST00000425819 TRPM4Q8TD43 1214 aa18.64■□□□□ 0.58
SCRN1-205ENST00000425819 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.64■□□□□ 0.58
SCRN1-205ENST00000425819 ASTN2O75129 1339 aaPredicted RBP18.64■□□□□ 0.57
SCRN1-205ENST00000425819 DDTLA6NHG4 134 aaPredicted RBP18.64■□□□□ 0.57
SCRN1-205ENST00000425819 HLA-DOAP06340 250 aa18.64■□□□□ 0.57
SCRN1-205ENST00000425819 FGRP09769 529 aa18.64■□□□□ 0.57
SCRN1-205ENST00000425819 FGD1P98174 961 aa18.64■□□□□ 0.57
SCRN1-205ENST00000425819 SH3BP5LQ7L8J4 393 aa18.64■□□□□ 0.57
SCRN1-205ENST00000425819 IL27Q8NEV9 243 aa18.64■□□□□ 0.57
SCRN1-205ENST00000425819 ZC3H4Q9UPT8 1303 aaKnown RBP18.63■□□□□ 0.57
SCRN1-205ENST00000425819 K7ELQ4 463 aaPredicted RBP18.63■□□□□ 0.57
SCRN1-205ENST00000425819 ORC4O43929 436 aa18.63■□□□□ 0.57
SCRN1-205ENST00000425819 RANBP6O60518 1105 aaKnown RBP18.63■□□□□ 0.57
SCRN1-205ENST00000425819 PCP11498 1178 aaKnown RBP18.63■□□□□ 0.57
SCRN1-205ENST00000425819 TOB2Q14106 344 aaPredicted RBP18.63■□□□□ 0.57
SCRN1-205ENST00000425819 ESR2Q92731 530 aa18.63■□□□□ 0.57
SCRN1-205ENST00000425819 DHX36Q9H2U1 1008 aaKnown RBP18.63■□□□□ 0.57
SCRN1-205ENST00000425819 MKNK2Q9HBH9 465 aa18.63■□□□□ 0.57
SCRN1-205ENST00000425819 ZSWIM5Q9P217 1185 aa18.63■□□□□ 0.57
SCRN1-205ENST00000425819 DAXXQ9UER7 740 aaPredicted RBP18.63■□□□□ 0.57
SCRN1-205ENST00000425819 SCAF8Q9UPN6 1271 aaKnown RBP18.63■□□□□ 0.57
SCRN1-205ENST00000425819 CNTNAP1P78357 1384 aa18.62■□□□□ 0.57
SCRN1-205ENST00000425819 MYH1P12882 1939 aa18.62■□□□□ 0.57
SCRN1-205ENST00000425819 CDK8P49336 464 aa18.62■□□□□ 0.57
SCRN1-205ENST00000425819 MCM2P49736 904 aa18.62■□□□□ 0.57
SCRN1-205ENST00000425819 FKBP1CQ5VVH2 108 aa18.62■□□□□ 0.57
SCRN1-205ENST00000425819 C16orf86Q6ZW13 317 aa18.62■□□□□ 0.57
SCRN1-205ENST00000425819 ALDH8A1Q9H2A2 487 aaPredicted RBP18.62■□□□□ 0.57
SCRN1-205ENST00000425819 GPHNQ9NQX3 736 aaPredicted RBP18.62■□□□□ 0.57
SCRN1-205ENST00000425819 GLTPD2A6NH11 291 aa18.61■□□□□ 0.57
SCRN1-205ENST00000425819 FAM151AQ8WW52 585 aa18.61■□□□□ 0.57
SCRN1-205ENST00000425819 BRF1Q92994 677 aa18.61■□□□□ 0.57
SCRN1-205ENST00000425819 SERPINB13Q9UIV8 391 aa18.61■□□□□ 0.57
SCRN1-205ENST00000425819 HACL1Q9UJ83 578 aa18.61■□□□□ 0.57
SCRN1-205ENST00000425819 DCAF8L1A6NGE4 600 aa18.6■□□□□ 0.57
SCRN1-205ENST00000425819 SLURP2P0DP57 97 aa18.6■□□□□ 0.57
SCRN1-205ENST00000425819 HIRAP54198 1017 aaPredicted RBP18.6■□□□□ 0.57
SCRN1-205ENST00000425819 GABPAQ06546 454 aa18.6■□□□□ 0.57
SCRN1-205ENST00000425819 ANKRD1Q15327 319 aa18.6■□□□□ 0.57
SCRN1-205ENST00000425819 FAM47AQ5JRC9 791 aa18.6■□□□□ 0.57
SCRN1-205ENST00000425819 L3MBTL3Q96JM7 780 aaPredicted RBP18.6■□□□□ 0.57
SCRN1-205ENST00000425819 ZKSCAN3Q9BRR0 538 aa18.6■□□□□ 0.57
SCRN1-205ENST00000425819 TMEM39BQ9GZU3 492 aa18.6■□□□□ 0.57
SCRN1-205ENST00000425819 ADARB2Q9NS39 739 aaKnown RBP18.6■□□□□ 0.57
SCRN1-205ENST00000425819 WDR19Q8NEZ3 1342 aa18.6■□□□□ 0.57
SCRN1-205ENST00000425819 TNNI2P48788 182 aa18.59■□□□□ 0.57
SCRN1-205ENST00000425819 ANGEL2Q5VTE6 544 aaKnown RBP18.59■□□□□ 0.57
SCRN1-205ENST00000425819 FAM83AQ86UY5 434 aa18.59■□□□□ 0.57
SCRN1-205ENST00000425819 CRACR2BQ8N4Y2 399 aaPredicted RBP18.59■□□□□ 0.57
SCRN1-205ENST00000425819 EHD4Q9H223 541 aa18.59■□□□□ 0.57
SCRN1-205ENST00000425819 ZNF287Q9HBT7 754 aa18.59■□□□□ 0.57
SCRN1-205ENST00000425819 PI4KBQ9UBF8 816 aa18.59■□□□□ 0.57
SCRN1-205ENST00000425819 LIMCH1Q9UPQ0 1083 aa18.59■□□□□ 0.57
SCRN1-205ENST00000425819 ATRNL1Q5VV63 1379 aa18.59■□□□□ 0.57
SCRN1-205ENST00000425819 TSPY2A6NKD2 308 aa18.59■□□□□ 0.57
SCRN1-205ENST00000425819 FAM196BA6NMK8 535 aa18.59■□□□□ 0.57
SCRN1-205ENST00000425819 IFIT3O14879 490 aaKnown RBP18.59■□□□□ 0.57
SCRN1-205ENST00000425819 RASA1P20936 1047 aa18.59■□□□□ 0.57
SCRN1-205ENST00000425819 TNFAIP1Q13829 316 aa18.59■□□□□ 0.57
SCRN1-205ENST00000425819 ZNF444Q8N0Y2 327 aaPredicted RBP18.59■□□□□ 0.57
SCRN1-205ENST00000425819 TMX3Q96JJ7 454 aa18.59■□□□□ 0.57
SCRN1-205ENST00000425819 CSRNP1Q96S65 589 aa18.59■□□□□ 0.57
SCRN1-205ENST00000425819 TPCN1Q9ULQ1 816 aa18.59■□□□□ 0.57
SCRN1-205ENST00000425819 COL2A1P02458 1487 aaPredicted RBP18.59■□□□□ 0.57
SCRN1-205ENST00000425819 SH2B2O14492 632 aaPredicted RBP18.58■□□□□ 0.56
SCRN1-205ENST00000425819 TFAP4Q01664 338 aa18.58■□□□□ 0.56
SCRN1-205ENST00000425819 APOBRQ0VD83 1088 aa18.58■□□□□ 0.56
SCRN1-205ENST00000425819 RASA3Q14644 834 aa18.58■□□□□ 0.56
SCRN1-205ENST00000425819 TMEM67Q5HYA8 995 aa18.58■□□□□ 0.56
SCRN1-205ENST00000425819 CDAN1Q8IWY9 1227 aa18.58■□□□□ 0.56
SCRN1-205ENST00000425819 SPRYD3Q8NCJ5 442 aa18.58■□□□□ 0.56
SCRN1-205ENST00000425819 TMEM87BQ96K49 555 aa18.58■□□□□ 0.56
SCRN1-205ENST00000425819 UBAC1Q9BSL1 405 aa18.58■□□□□ 0.56
SCRN1-205ENST00000425819 TRIM34Q9BYJ4 488 aa18.58■□□□□ 0.56
SCRN1-205ENST00000425819 AGXT2Q9BYV1 514 aa18.58■□□□□ 0.56
SCRN1-205ENST00000425819 GGA3Q9NZ52 723 aa18.58■□□□□ 0.56
SCRN1-205ENST00000425819 SWAP70Q9UH65 585 aa18.58■□□□□ 0.56
SCRN1-205ENST00000425819 LARGE1O95461 756 aa18.57■□□□□ 0.56
SCRN1-205ENST00000425819 FOXP4Q8IVH2 680 aaPredicted RBP18.57■□□□□ 0.56
SCRN1-205ENST00000425819 IGDCC4Q8TDY8 1250 aa18.57■□□□□ 0.56
SCRN1-205ENST00000425819 DNAJC18Q9H819 358 aa18.57■□□□□ 0.56
SCRN1-205ENST00000425819 UTRNP46939 3433 aa18.57■□□□□ 0.56
SCRN1-205ENST00000425819 TSPY3P0CV98 308 aa18.56■□□□□ 0.56
SCRN1-205ENST00000425819 TSPY8P0CW00 308 aa18.56■□□□□ 0.56
SCRN1-205ENST00000425819 SHMT1P34896 483 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms