RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 NAV1Q8NEY1 1877 aa30.96■■■□□ 2.55
LDB1-202ENST00000425280 CDK5RAP2Q96SN8 1893 aa30.96■■■□□ 2.55
LDB1-202ENST00000425280 GUCY1B3Q02153 619 aa30.96■■■□□ 2.55
LDB1-202ENST00000425280 C12orf60Q5U649 245 aa30.96■■■□□ 2.55
LDB1-202ENST00000425280 CPLX2Q6PUV4 134 aaKnown RBP30.96■■■□□ 2.55
LDB1-202ENST00000425280 FBXW7Q969H0 707 aa30.95■■■□□ 2.55
LDB1-202ENST00000425280 SUGT1Q9Y2Z0 365 aa30.95■■■□□ 2.55
LDB1-202ENST00000425280 ENAHQ8N8S7 591 aaPredicted RBP30.94■■■□□ 2.54
LDB1-202ENST00000425280 C8orf76Q96K31 380 aa30.94■■■□□ 2.54
LDB1-202ENST00000425280 TTC6Q86TZ1 520 aa30.94■■■□□ 2.54
LDB1-202ENST00000425280 CERS5Q8N5B7 392 aa30.94■■■□□ 2.54
LDB1-202ENST00000425280 TFIP11Q9UBB9 837 aaKnown RBP30.94■■■□□ 2.54
LDB1-202ENST00000425280 RCAN1P53805 252 aa30.93■■■□□ 2.54
LDB1-202ENST00000425280 PDE4BQ07343 736 aa30.93■■■□□ 2.54
LDB1-202ENST00000425280 SLC4A8Q2Y0W8 1093 aa30.93■■■□□ 2.54
LDB1-202ENST00000425280 GAS2L3Q86XJ1 694 aa30.93■■■□□ 2.54
LDB1-202ENST00000425280 ZNF654Q8IZM8 581 aa30.93■■■□□ 2.54
LDB1-202ENST00000425280 ZNF219Q9P2Y4 722 aaPredicted RBP30.93■■■□□ 2.54
LDB1-202ENST00000425280 DLEC1Q9Y238 1755 aa30.93■■■□□ 2.54
LDB1-202ENST00000425280 PLCG2P16885 1265 aa30.93■■■□□ 2.54
LDB1-202ENST00000425280 IQCA1Q86XH1 822 aa30.93■■■□□ 2.54
LDB1-202ENST00000425280 C7orf43Q8WVR3 580 aa30.93■■■□□ 2.54
LDB1-202ENST00000425280 MYH15Q9Y2K3 1946 aa30.92■■■□□ 2.54
LDB1-202ENST00000425280 G3V3G9 751 aa30.92■■■□□ 2.54
LDB1-202ENST00000425280 RHBDL3P58872 404 aa30.92■■■□□ 2.54
LDB1-202ENST00000425280 ZNF445P59923 1031 aa30.92■■■□□ 2.54
LDB1-202ENST00000425280 DCAF8Q5TAQ9 597 aa30.92■■■□□ 2.54
LDB1-202ENST00000425280 OTUD7BQ6GQQ9 843 aa30.92■■■□□ 2.54
LDB1-202ENST00000425280 MAPKAPK5Q8IW41 473 aa30.92■■■□□ 2.54
LDB1-202ENST00000425280 FBXO18Q8NFZ0 1043 aa30.92■■■□□ 2.54
LDB1-202ENST00000425280 PHKBQ93100 1093 aa30.92■■■□□ 2.54
LDB1-202ENST00000425280 SCAND2PQ9GZW5 306 aaPredicted RBP30.92■■■□□ 2.54
LDB1-202ENST00000425280 ISY1Q9ULR0 285 aaKnown RBP30.92■■■□□ 2.54
LDB1-202ENST00000425280 ELP1O95163 1332 aa30.92■■■□□ 2.54
LDB1-202ENST00000425280 ROBO3Q96MS0 1386 aa30.92■■■□□ 2.54
LDB1-202ENST00000425280 L1TD1Q5T7N2 865 aaKnown RBP30.91■■■□□ 2.54
LDB1-202ENST00000425280 TEX11Q8IYF3 940 aa30.91■■■□□ 2.54
LDB1-202ENST00000425280 C10orf71Q711Q0 1435 aa30.91■■■□□ 2.54
LDB1-202ENST00000425280 RTN1Q16799 776 aa30.91■■■□□ 2.54
LDB1-202ENST00000425280 DAGLAQ9Y4D2 1042 aa30.91■■■□□ 2.54
LDB1-202ENST00000425280 MXD3Q9BW11 206 aa30.9■■■□□ 2.54
LDB1-202ENST00000425280 ECM29Q5VYK3 1845 aa30.9■■■□□ 2.54
LDB1-202ENST00000425280 IARSP41252 1262 aaKnown RBP30.89■■■□□ 2.54
LDB1-202ENST00000425280 FAM47AQ5JRC9 791 aa30.89■■■□□ 2.54
LDB1-202ENST00000425280 AMOTL1Q8IY63 956 aa30.89■■■□□ 2.54
LDB1-202ENST00000425280 DBNDD1Q9H9R9 158 aa30.89■■■□□ 2.54
LDB1-202ENST00000425280 IFNAR1P17181 557 aa30.89■■■□□ 2.54
LDB1-202ENST00000425280 IFIT1BQ5T764 474 aaKnown RBP30.89■■■□□ 2.54
LDB1-202ENST00000425280 PODNQ7Z5L7 613 aa30.89■■■□□ 2.54
LDB1-202ENST00000425280 ILDR1Q86SU0 546 aaPredicted RBP30.89■■■□□ 2.54
LDB1-202ENST00000425280 RGS22Q8NE09 1264 aa30.89■■■□□ 2.54
LDB1-202ENST00000425280 LEO1Q8WVC0 666 aaPredicted RBP30.89■■■□□ 2.54
LDB1-202ENST00000425280 DYNLL2Q96FJ2 89 aa30.89■■■□□ 2.54
LDB1-202ENST00000425280 ALG1Q9BT22 464 aa30.89■■■□□ 2.54
LDB1-202ENST00000425280 GJB4Q9NTQ9 266 aa30.89■■■□□ 2.54
LDB1-202ENST00000425280 DDX60LQ5H9U9 1706 aaKnown RBP30.89■■■□□ 2.54
LDB1-202ENST00000425280 F8W031 263 aaPredicted RBP30.88■■■□□ 2.53
LDB1-202ENST00000425280 FANCBQ8NB91 859 aa30.88■■■□□ 2.53
LDB1-202ENST00000425280 SPATA32Q96LK8 384 aa30.88■■■□□ 2.53
LDB1-202ENST00000425280 AIFM3Q96NN9 605 aa30.88■■■□□ 2.53
LDB1-202ENST00000425280 SAP30BPQ9UHR5 308 aaKnown RBP30.88■■■□□ 2.53
LDB1-202ENST00000425280 STK36Q9NRP7 1315 aa30.88■■■□□ 2.53
LDB1-202ENST00000425280 TPRNQ4KMQ1 711 aa30.88■■■□□ 2.53
LDB1-202ENST00000425280 NUP133Q8WUM0 1156 aa30.88■■■□□ 2.53
LDB1-202ENST00000425280 SNED1Q8TER0 1413 aa30.88■■■□□ 2.53
LDB1-202ENST00000425280 SYAP1Q96A49 352 aaPredicted RBP30.87■■■□□ 2.53
LDB1-202ENST00000425280 TTF2Q9UNY4 1162 aaKnown RBP30.87■■■□□ 2.53
LDB1-202ENST00000425280 FLT1P17948 1338 aa30.87■■■□□ 2.53
LDB1-202ENST00000425280 FMNL1O95466 1100 aaPredicted RBP30.86■■■□□ 2.53
LDB1-202ENST00000425280 POLR3DP05423 398 aaPredicted RBP30.86■■■□□ 2.53
LDB1-202ENST00000425280 SSRP1Q08945 709 aaKnown RBP30.86■■■□□ 2.53
LDB1-202ENST00000425280 CCDC196A0A1B0GTZ2 297 aa30.86■■■□□ 2.53
LDB1-202ENST00000425280 NMT2O60551 498 aa30.86■■■□□ 2.53
LDB1-202ENST00000425280 PLCD1P51178 756 aa30.86■■■□□ 2.53
LDB1-202ENST00000425280 SLC16A10Q8TF71 515 aa30.86■■■□□ 2.53
LDB1-202ENST00000425280 SLC26A6Q9BXS9 759 aa30.86■■■□□ 2.53
LDB1-202ENST00000425280 KCNQ5Q9NR82 932 aa30.86■■■□□ 2.53
LDB1-202ENST00000425280 CFAP45Q9UL16 551 aa30.86■■■□□ 2.53
LDB1-202ENST00000425280 TSPY2A6NKD2 308 aa30.85■■■□□ 2.53
LDB1-202ENST00000425280 FOCADQ5VW36 1801 aa30.85■■■□□ 2.53
LDB1-202ENST00000425280 NT5C2P49902 561 aa30.85■■■□□ 2.53
LDB1-202ENST00000425280 CATIPQ7Z7H3 387 aa30.85■■■□□ 2.53
LDB1-202ENST00000425280 CC2D2BQ6DHV5 1058 aa30.84■■■□□ 2.53
LDB1-202ENST00000425280 PPP2R5BQ15173 497 aa30.83■■■□□ 2.53
LDB1-202ENST00000425280 NBPF11Q86T75 865 aa30.83■■■□□ 2.53
LDB1-202ENST00000425280 UBE2Q2LH0YL09 131 aa30.83■■■□□ 2.53
LDB1-202ENST00000425280 ECE2O60344 883 aa30.83■■■□□ 2.53
LDB1-202ENST00000425280 MRE11P49959 708 aa30.83■■■□□ 2.53
LDB1-202ENST00000425280 ATL3Q6DD88 541 aa30.83■■■□□ 2.53
LDB1-202ENST00000425280 GRPEL1Q9HAV7 217 aa30.83■■■□□ 2.53
LDB1-202ENST00000425280 MYH1P12882 1939 aa30.82■■■□□ 2.53
LDB1-202ENST00000425280 SYCE3A1L190 88 aa30.82■■■□□ 2.52
LDB1-202ENST00000425280 XRCC6P12956 609 aaKnown RBP eCLIP30.82■■■□□ 2.523e-6■■■□□ 15.3
LDB1-202ENST00000425280 TFAP4Q01664 338 aa30.82■■■□□ 2.52
LDB1-202ENST00000425280 CRACR2BQ8N4Y2 399 aaPredicted RBP30.82■■■□□ 2.52
LDB1-202ENST00000425280 ZNF396Q96N95 335 aaPredicted RBP30.82■■■□□ 2.52
LDB1-202ENST00000425280 MKNK2Q9HBH9 465 aa30.82■■■□□ 2.52
LDB1-202ENST00000425280 SCN9AQ15858 1988 aa30.82■■■□□ 2.52
LDB1-202ENST00000425280 SCNN1DP51172 638 aa30.82■■■□□ 2.52
LDB1-202ENST00000425280 TROAPQ12815 778 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms