RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 TAF5LO75529 589 aa8.58□□□□□ -1.04
EPHA4-206ENST00000424339 UQCRFS1P1P0C7P4 283 aa8.58□□□□□ -1.04
EPHA4-206ENST00000424339 YBX3P16989 372 aaKnown RBP eCLIP8.58□□□□□ -1.04
EPHA4-206ENST00000424339 IARSP41252 1262 aaKnown RBP8.58□□□□□ -1.04
EPHA4-206ENST00000424339 MAP2K5Q13163 448 aa8.58□□□□□ -1.04
EPHA4-206ENST00000424339 CCDC158Q5M9N0 1113 aa8.58□□□□□ -1.04
EPHA4-206ENST00000424339 GORABQ5T7V8 394 aa8.58□□□□□ -1.04
EPHA4-206ENST00000424339 ARHGAP27Q6ZUM4 889 aa8.58□□□□□ -1.04
EPHA4-206ENST00000424339 PODNQ7Z5L7 613 aa8.58□□□□□ -1.04
EPHA4-206ENST00000424339 AACSQ86V21 672 aa8.58□□□□□ -1.04
EPHA4-206ENST00000424339 CHD1LQ86WJ1 897 aa8.58□□□□□ -1.04
EPHA4-206ENST00000424339 JDP2Q8WYK2 163 aa8.58□□□□□ -1.04
EPHA4-206ENST00000424339 ZNF512BQ96KM6 892 aaPredicted RBP8.58□□□□□ -1.04
EPHA4-206ENST00000424339 ZFAND3Q9H8U3 227 aa8.58□□□□□ -1.04
EPHA4-206ENST00000424339 AOX1Q06278 1338 aa8.57□□□□□ -1.04
EPHA4-206ENST00000424339 PDS5AQ29RF7 1337 aaKnown RBP8.57□□□□□ -1.04
EPHA4-206ENST00000424339 TTC41PQ6P2S7 1318 aa8.57□□□□□ -1.04
EPHA4-206ENST00000424339 CHD4Q14839 1912 aa8.57□□□□□ -1.04
EPHA4-206ENST00000424339 IRF6O14896 467 aa8.57□□□□□ -1.04
EPHA4-206ENST00000424339 ERC2O15083 957 aa8.57□□□□□ -1.04
EPHA4-206ENST00000424339 PPIP5K2O43314 1243 aa8.57□□□□□ -1.04
EPHA4-206ENST00000424339 HIBADHP31937 336 aaKnown RBP8.57□□□□□ -1.04
EPHA4-206ENST00000424339 MMP14P50281 582 aa8.57□□□□□ -1.04
EPHA4-206ENST00000424339 ANKRD45Q5TZF3 282 aa8.57□□□□□ -1.04
EPHA4-206ENST00000424339 TMED8Q6PL24 325 aaPredicted RBP8.57□□□□□ -1.04
EPHA4-206ENST00000424339 FBXO33Q7Z6M2 555 aa8.57□□□□□ -1.04
EPHA4-206ENST00000424339 NIM1KQ8IY84 436 aa8.57□□□□□ -1.04
EPHA4-206ENST00000424339 LARGE2Q8N3Y3 721 aa8.57□□□□□ -1.04
EPHA4-206ENST00000424339 HELBQ8NG08 1087 aaPredicted RBP8.57□□□□□ -1.04
EPHA4-206ENST00000424339 EAF2Q96CJ1 260 aaPredicted RBP8.57□□□□□ -1.04
EPHA4-206ENST00000424339 XAGE2Q96GT9 111 aa8.57□□□□□ -1.04
EPHA4-206ENST00000424339 NEUROD6Q96NK8 337 aa8.57□□□□□ -1.04
EPHA4-206ENST00000424339 SBF1O95248 1867 aa8.57□□□□□ -1.04
EPHA4-206ENST00000424339 IRS2Q9Y4H2 1338 aa8.56□□□□□ -1.04
EPHA4-206ENST00000424339 APBB1O00213 710 aa8.56□□□□□ -1.04
EPHA4-206ENST00000424339 IL1R1P14778 569 aa8.56□□□□□ -1.04
EPHA4-206ENST00000424339 IRS1P35568 1242 aa8.56□□□□□ -1.04
EPHA4-206ENST00000424339 TIMM10P62072 90 aa8.56□□□□□ -1.04
EPHA4-206ENST00000424339 OLFM4Q6UX06 510 aa8.56□□□□□ -1.04
EPHA4-206ENST00000424339 TICAM2Q86XR7 235 aa8.56□□□□□ -1.04
EPHA4-206ENST00000424339 ZGPATQ8N5A5 531 aaKnown RBP8.56□□□□□ -1.04
EPHA4-206ENST00000424339 GPR161Q8N6U8 529 aaKnown RBP8.56□□□□□ -1.04
EPHA4-206ENST00000424339 KRI1Q8N9T8 703 aaKnown RBP8.56□□□□□ -1.04
EPHA4-206ENST00000424339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.56□□□□□ -1.04
EPHA4-206ENST00000424339 TBC1D22AQ8WUA7 517 aa8.56□□□□□ -1.04
EPHA4-206ENST00000424339 ITPKCQ96DU7 683 aa8.56□□□□□ -1.04
EPHA4-206ENST00000424339 FAM84BQ96KN1 310 aaPredicted RBP8.56□□□□□ -1.04
EPHA4-206ENST00000424339 IL1RAPL2Q9NP60 686 aa8.56□□□□□ -1.04
EPHA4-206ENST00000424339 ECHDC1Q9NTX5 307 aa8.56□□□□□ -1.04
EPHA4-206ENST00000424339 DBNLQ9UJU6 430 aaKnown RBP8.56□□□□□ -1.04
EPHA4-206ENST00000424339 DENND2AQ9ULE3 1009 aa8.56□□□□□ -1.04
EPHA4-206ENST00000424339 PCDHGC3Q9UN70 934 aa8.56□□□□□ -1.04
EPHA4-206ENST00000424339 MYH13Q9UKX3 1938 aa8.56□□□□□ -1.04
EPHA4-206ENST00000424339 MYO3BQ8WXR4 1341 aa8.55□□□□□ -1.04
EPHA4-206ENST00000424339 CCDC88AQ3V6T2 1871 aa8.55□□□□□ -1.04
EPHA4-206ENST00000424339 PSME4Q14997 1843 aa8.55□□□□□ -1.04
EPHA4-206ENST00000424339 GLRX3O76003 335 aaKnown RBP8.55□□□□□ -1.04
EPHA4-206ENST00000424339 MX1P20591 662 aa8.55□□□□□ -1.04
EPHA4-206ENST00000424339 ARID4AP29374 1257 aaPredicted RBP8.55□□□□□ -1.04
EPHA4-206ENST00000424339 FKBP1AP62942 108 aaKnown RBP8.55□□□□□ -1.04
EPHA4-206ENST00000424339 KRT76Q01546 638 aa8.55□□□□□ -1.04
EPHA4-206ENST00000424339 AOC3Q16853 763 aa8.55□□□□□ -1.04
EPHA4-206ENST00000424339 TTC39AQ5SRH9 613 aa8.55□□□□□ -1.04
EPHA4-206ENST00000424339 CCDC102BQ68D86 513 aa8.55□□□□□ -1.04
EPHA4-206ENST00000424339 B4GALNT3Q6L9W6 998 aa8.55□□□□□ -1.04
EPHA4-206ENST00000424339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.55□□□□□ -1.04
EPHA4-206ENST00000424339 SVOPQ8N4V2 548 aa8.55□□□□□ -1.04
EPHA4-206ENST00000424339 TDRD7Q8NHU6 1098 aaKnown RBP8.55□□□□□ -1.04
EPHA4-206ENST00000424339 LNPKQ9C0E8 428 aa8.55□□□□□ -1.04
EPHA4-206ENST00000424339 OSBPL3Q9H4L5 887 aa8.55□□□□□ -1.04
EPHA4-206ENST00000424339 CD209Q9NNX6 404 aa8.55□□□□□ -1.04
EPHA4-206ENST00000424339 ZNF277Q9NRM2 450 aaPredicted RBP8.55□□□□□ -1.04
EPHA4-206ENST00000424339 STAP2Q9UGK3 403 aa8.55□□□□□ -1.04
EPHA4-206ENST00000424339 WWC3Q9ULE0 1092 aa8.55□□□□□ -1.04
EPHA4-206ENST00000424339 ZNRF3Q9ULT6 936 aa8.55□□□□□ -1.04
EPHA4-206ENST00000424339 SUGT1Q9Y2Z0 365 aa8.55□□□□□ -1.04
EPHA4-206ENST00000424339 DNMT3AQ9Y6K1 912 aaPredicted RBP8.55□□□□□ -1.04
EPHA4-206ENST00000424339 SRCAPQ6ZRS2 3230 aa8.54□□□□□ -1.04
EPHA4-206ENST00000424339 FZD9O00144 591 aa8.54□□□□□ -1.04
EPHA4-206ENST00000424339 SPTLC1O15269 473 aa8.54□□□□□ -1.04
EPHA4-206ENST00000424339 ECE2O60344 883 aa8.54□□□□□ -1.04
EPHA4-206ENST00000424339 FRAT2O75474 233 aaPredicted RBP8.54□□□□□ -1.04
EPHA4-206ENST00000424339 ATP5JP18859 108 aa8.54□□□□□ -1.04
EPHA4-206ENST00000424339 MARSP56192 900 aaKnown RBP8.54□□□□□ -1.04
EPHA4-206ENST00000424339 EIF6P56537 245 aaKnown RBP8.54□□□□□ -1.04
EPHA4-206ENST00000424339 TNIP1Q15025 636 aa8.54□□□□□ -1.04
EPHA4-206ENST00000424339 TTF1Q15361 905 aaPredicted RBP8.54□□□□□ -1.04
EPHA4-206ENST00000424339 STRIP1Q5VSL9 837 aa8.54□□□□□ -1.04
EPHA4-206ENST00000424339 WDR66Q8TBY9 1149 aa8.54□□□□□ -1.04
EPHA4-206ENST00000424339 CDK15Q96Q40 435 aa8.54□□□□□ -1.04
EPHA4-206ENST00000424339 DBNDD2Q9BQY9 259 aa8.54□□□□□ -1.04
EPHA4-206ENST00000424339 FAM205AQ6ZU69 1335 aa8.54□□□□□ -1.04
EPHA4-206ENST00000424339 SALL3Q9BXA9 1300 aa8.54□□□□□ -1.04
EPHA4-206ENST00000424339 SALL1Q9NSC2 1324 aa8.54□□□□□ -1.04
EPHA4-206ENST00000424339 USP17L3A6NCW0 530 aa8.53□□□□□ -1.04
EPHA4-206ENST00000424339 USP17L4A6NCW7 530 aa8.53□□□□□ -1.04
EPHA4-206ENST00000424339 SMARCA5O60264 1052 aaPredicted RBP8.53□□□□□ -1.04
EPHA4-206ENST00000424339 RPS12P25398 132 aaKnown RBP8.53□□□□□ -1.04
EPHA4-206ENST00000424339 ADORA1P30542 326 aa8.53□□□□□ -1.04
EPHA4-206ENST00000424339 CTHP32929 405 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms