RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 BEGAINQ9BUH8 593 aa20.34■□□□□ 0.85
FOXN4-203ENST00000423960 USP17L12C9JPN9 530 aa20.33■□□□□ 0.85
FOXN4-203ENST00000423960 USP17L21D6R901 530 aa20.33■□□□□ 0.85
FOXN4-203ENST00000423960 CDC45O75419 566 aa20.33■□□□□ 0.85
FOXN4-203ENST00000423960 USP2O75604 605 aaPredicted RBP20.33■□□□□ 0.85
FOXN4-203ENST00000423960 ZNF157P51786 506 aaPredicted RBP20.33■□□□□ 0.85
FOXN4-203ENST00000423960 MAP3K10Q02779 954 aa20.33■□□□□ 0.85
FOXN4-203ENST00000423960 SLC4A8Q2Y0W8 1093 aa20.33■□□□□ 0.85
FOXN4-203ENST00000423960 VPS53Q5VIR6 699 aa20.33■□□□□ 0.85
FOXN4-203ENST00000423960 CASC1Q6TDU7 716 aa20.33■□□□□ 0.85
FOXN4-203ENST00000423960 AMOTL1Q8IY63 956 aa20.33■□□□□ 0.85
FOXN4-203ENST00000423960 ANGEL1Q9UNK9 670 aaKnown RBP20.33■□□□□ 0.85
FOXN4-203ENST00000423960 FZD1Q9UP38 647 aa20.33■□□□□ 0.85
FOXN4-203ENST00000423960 RAD50Q92878 1312 aa20.32■□□□□ 0.84
FOXN4-203ENST00000423960 AK9Q5TCS8 1911 aa20.32■□□□□ 0.84
FOXN4-203ENST00000423960 UBE2Q2LH0YL09 131 aa20.32■□□□□ 0.84
FOXN4-203ENST00000423960 TBC1D12O60347 775 aa20.32■□□□□ 0.84
FOXN4-203ENST00000423960 HSPD1P10809 573 aaKnown RBP20.32■□□□□ 0.84
FOXN4-203ENST00000423960 HSPA8P11142 646 aaKnown RBP20.32■□□□□ 0.84
FOXN4-203ENST00000423960 IREB2P48200 963 aaKnown RBP20.32■□□□□ 0.84
FOXN4-203ENST00000423960 TDO2P48775 406 aa20.32■□□□□ 0.84
FOXN4-203ENST00000423960 PLCD1P51178 756 aa20.32■□□□□ 0.84
FOXN4-203ENST00000423960 NOGQ13253 232 aa20.32■□□□□ 0.84
FOXN4-203ENST00000423960 CTR9Q6PD62 1173 aa20.32■□□□□ 0.84
FOXN4-203ENST00000423960 ZNF341Q9BYN7 854 aa20.32■□□□□ 0.84
FOXN4-203ENST00000423960 EPB41L4AQ9HCS5 686 aaPredicted RBP20.32■□□□□ 0.84
FOXN4-203ENST00000423960 TSKSQ9UJT2 592 aa20.32■□□□□ 0.84
FOXN4-203ENST00000423960 SSC5DA1L4H1 1573 aa20.32■□□□□ 0.84
FOXN4-203ENST00000423960 THSD7BQ9C0I4 1608 aa20.31■□□□□ 0.84
FOXN4-203ENST00000423960 FAM155AB1AL88 458 aaPredicted RBP20.31■□□□□ 0.84
FOXN4-203ENST00000423960 SGSM2O43147 1006 aa20.31■□□□□ 0.84
FOXN4-203ENST00000423960 ALX1Q15699 326 aa20.31■□□□□ 0.84
FOXN4-203ENST00000423960 MAP3K11Q16584 847 aa20.31■□□□□ 0.84
FOXN4-203ENST00000423960 SBK1Q52WX2 424 aa20.31■□□□□ 0.84
FOXN4-203ENST00000423960 METTL16Q86W50 562 aaKnown RBP20.31■□□□□ 0.84
FOXN4-203ENST00000423960 CRACR2BQ8N4Y2 399 aaPredicted RBP20.31■□□□□ 0.84
FOXN4-203ENST00000423960 TRIM34Q9BYJ4 488 aa20.31■□□□□ 0.84
FOXN4-203ENST00000423960 NAPBQ9H115 298 aa20.31■□□□□ 0.84
FOXN4-203ENST00000423960 IL25Q9H293 177 aa20.31■□□□□ 0.84
FOXN4-203ENST00000423960 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.31■□□□□ 0.84
FOXN4-203ENST00000423960 HERC5Q9UII4 1024 aaKnown RBP20.31■□□□□ 0.84
FOXN4-203ENST00000423960 FOXP2O15409 715 aa20.3■□□□□ 0.84
FOXN4-203ENST00000423960 SLURP2P0DP57 97 aa20.3■□□□□ 0.84
FOXN4-203ENST00000423960 CYP2D6P10635 497 aa20.3■□□□□ 0.84
FOXN4-203ENST00000423960 C12orf60Q5U649 245 aa20.3■□□□□ 0.84
FOXN4-203ENST00000423960 CCDC102AQ96A19 550 aa20.3■□□□□ 0.84
FOXN4-203ENST00000423960 PRDM10Q9NQV6 1147 aa20.3■□□□□ 0.84
FOXN4-203ENST00000423960 ARPP21Q9UBL0 812 aaPredicted RBP20.3■□□□□ 0.84
FOXN4-203ENST00000423960 MINDY4BA8MYZ0 360 aa20.29■□□□□ 0.84
FOXN4-203ENST00000423960 FGAP02671 866 aa20.29■□□□□ 0.84
FOXN4-203ENST00000423960 MAP3K9P80192 1104 aa20.29■□□□□ 0.84
FOXN4-203ENST00000423960 LDLRAD1Q5T700 205 aa20.29■□□□□ 0.84
FOXN4-203ENST00000423960 ESYT1Q9BSJ8 1104 aa20.29■□□□□ 0.84
FOXN4-203ENST00000423960 EHD4Q9H223 541 aa20.29■□□□□ 0.84
FOXN4-203ENST00000423960 SERPINB13Q9UIV8 391 aa20.29■□□□□ 0.84
FOXN4-203ENST00000423960 ZNF112Q9UJU3 913 aa20.29■□□□□ 0.84
FOXN4-203ENST00000423960 CYP2D7A0A087X1C5 515 aa20.28■□□□□ 0.84
FOXN4-203ENST00000423960 UNCXA6NJT0 531 aa20.28■□□□□ 0.84
FOXN4-203ENST00000423960 FAM196BA6NMK8 535 aa20.28■□□□□ 0.84
FOXN4-203ENST00000423960 KIF23Q02241 960 aaPredicted RBP20.28■□□□□ 0.84
FOXN4-203ENST00000423960 WRNIP1Q96S55 665 aa20.28■□□□□ 0.84
FOXN4-203ENST00000423960 DSCC1Q9BVC3 393 aa20.28■□□□□ 0.84
FOXN4-203ENST00000423960 CDK5RAP2Q96SN8 1893 aa20.28■□□□□ 0.84
FOXN4-203ENST00000423960 FOCADQ5VW36 1801 aa20.27■□□□□ 0.84
FOXN4-203ENST00000423960 PHF20L1A8MW92 1017 aa20.27■□□□□ 0.84
FOXN4-203ENST00000423960 SLC10A3P09131 477 aa20.27■□□□□ 0.84
FOXN4-203ENST00000423960 EVX2Q03828 476 aa20.27■□□□□ 0.84
FOXN4-203ENST00000423960 GABPAQ06546 454 aa20.27■□□□□ 0.84
FOXN4-203ENST00000423960 ANKRD13AQ8IZ07 590 aa20.27■□□□□ 0.84
FOXN4-203ENST00000423960 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.27■□□□□ 0.84
FOXN4-203ENST00000423960 CAPN15O75808 1086 aa20.26■□□□□ 0.83
FOXN4-203ENST00000423960 KIAA1211Q6ZU35 1233 aa20.26■□□□□ 0.83
FOXN4-203ENST00000423960 RASAL3Q86YV0 1011 aa20.26■□□□□ 0.83
FOXN4-203ENST00000423960 DYNLL2Q96FJ2 89 aa20.26■□□□□ 0.83
FOXN4-203ENST00000423960 TAOK2Q9UL54 1235 aa20.26■□□□□ 0.83
FOXN4-203ENST00000423960 SMIM22K7EJ46 135 aa20.25■□□□□ 0.83
FOXN4-203ENST00000423960 INPP5BP32019 993 aa20.25■□□□□ 0.83
FOXN4-203ENST00000423960 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.25■□□□□ 0.83
FOXN4-203ENST00000423960 ZKSCAN4Q969J2 545 aaPredicted RBP20.25■□□□□ 0.83
FOXN4-203ENST00000423960 SLC10A4Q96EP9 437 aa20.25■□□□□ 0.83
FOXN4-203ENST00000423960 DNAJC18Q9H819 358 aa20.25■□□□□ 0.83
FOXN4-203ENST00000423960 SWAP70Q9UH65 585 aa20.25■□□□□ 0.83
FOXN4-203ENST00000423960 CTNNA3Q9UI47 895 aa20.25■□□□□ 0.83
FOXN4-203ENST00000423960 CSADQ9Y600 493 aa20.25■□□□□ 0.83
FOXN4-203ENST00000423960 PAPPA2Q9BXP8 1791 aa20.25■□□□□ 0.83
FOXN4-203ENST00000423960 ZMYM6O95789 1325 aa20.25■□□□□ 0.83
FOXN4-203ENST00000423960 MYH1P12882 1939 aa20.24■□□□□ 0.83
FOXN4-203ENST00000423960 CTNND1O60716 968 aaKnown RBP20.24■□□□□ 0.83
FOXN4-203ENST00000423960 PTH1RQ03431 593 aa20.24■□□□□ 0.83
FOXN4-203ENST00000423960 PPARAQ07869 468 aa20.24■□□□□ 0.83
FOXN4-203ENST00000423960 TATDN1Q6P1N9 297 aa20.24■□□□□ 0.83
FOXN4-203ENST00000423960 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.24■□□□□ 0.83
FOXN4-203ENST00000423960 CA12O43570 354 aa20.23■□□□□ 0.83
FOXN4-203ENST00000423960 SLC3A2P08195 630 aaKnown RBP20.23■□□□□ 0.83
FOXN4-203ENST00000423960 SHMT1P34896 483 aa20.23■□□□□ 0.83
FOXN4-203ENST00000423960 CDK8P49336 464 aa20.23■□□□□ 0.83
FOXN4-203ENST00000423960 VGLL4Q14135 290 aa20.23■□□□□ 0.83
FOXN4-203ENST00000423960 RRP1BQ14684 758 aaKnown RBP20.23■□□□□ 0.83
FOXN4-203ENST00000423960 CERKLQ49MI3 558 aaPredicted RBP20.23■□□□□ 0.83
FOXN4-203ENST00000423960 C16orf86Q6ZW13 317 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms