RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 HLA-DOAP06340 250 aa13.24□□□□□ -0.29
USP49-204ENST00000423567 INPP5BP32019 993 aa13.24□□□□□ -0.29
USP49-204ENST00000423567 DYNLL1P63167 89 aaKnown RBP13.24□□□□□ -0.29
USP49-204ENST00000423567 PPATQ06203 517 aa13.24□□□□□ -0.29
USP49-204ENST00000423567 NOL9Q5SY16 702 aaKnown RBP13.24□□□□□ -0.29
USP49-204ENST00000423567 ANKRD45Q5TZF3 282 aa13.24□□□□□ -0.29
USP49-204ENST00000423567 SH3BP5LQ7L8J4 393 aa13.24□□□□□ -0.29
USP49-204ENST00000423567 IFNL1Q8IU54 200 aa13.24□□□□□ -0.29
USP49-204ENST00000423567 RASEFQ8IZ41 740 aa13.24□□□□□ -0.29
USP49-204ENST00000423567 EXOC6Q8TAG9 804 aa13.24□□□□□ -0.29
USP49-204ENST00000423567 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.24□□□□□ -0.29
USP49-204ENST00000423567 PICK1Q9NRD5 415 aa13.24□□□□□ -0.29
USP49-204ENST00000423567 TTC41PQ6P2S7 1318 aa13.23□□□□□ -0.29
USP49-204ENST00000423567 ZNF532Q9HCE3 1301 aa13.23□□□□□ -0.29
USP49-204ENST00000423567 CCL15-CCL14A0A0B4J2E2 113 aa13.23□□□□□ -0.29
USP49-204ENST00000423567 CETPP11597 493 aa13.23□□□□□ -0.29
USP49-204ENST00000423567 GJA5P36382 358 aa13.23□□□□□ -0.29
USP49-204ENST00000423567 PPIL2Q13356 520 aa13.23□□□□□ -0.29
USP49-204ENST00000423567 SNAPC2Q13487 334 aa13.23□□□□□ -0.29
USP49-204ENST00000423567 CCL15Q16663 113 aa13.23□□□□□ -0.29
USP49-204ENST00000423567 SCYL3Q8IZE3 742 aa13.23□□□□□ -0.29
USP49-204ENST00000423567 CRACR2BQ8N4Y2 399 aaPredicted RBP13.23□□□□□ -0.29
USP49-204ENST00000423567 EDC3Q96F86 508 aaKnown RBP13.23□□□□□ -0.29
USP49-204ENST00000423567 CRNKL1Q9BZJ0 848 aaKnown RBP13.23□□□□□ -0.29
USP49-204ENST00000423567 PI4KBQ9UBF8 816 aa13.23□□□□□ -0.29
USP49-204ENST00000423567 HERC5Q9UII4 1024 aaKnown RBP13.23□□□□□ -0.29
USP49-204ENST00000423567 CTNND1O60716 968 aaKnown RBP13.22□□□□□ -0.29
USP49-204ENST00000423567 MAP3K10Q02779 954 aa13.22□□□□□ -0.29
USP49-204ENST00000423567 LRRFIP1Q32MZ4 808 aaKnown RBP13.22□□□□□ -0.29
USP49-204ENST00000423567 TESPA1A2RU30 521 aaPredicted RBP13.21□□□□□ -0.29
USP49-204ENST00000423567 PHF20L1A8MW92 1017 aa13.21□□□□□ -0.29
USP49-204ENST00000423567 IRF6O14896 467 aa13.21□□□□□ -0.29
USP49-204ENST00000423567 GLRX3O76003 335 aaKnown RBP13.21□□□□□ -0.29
USP49-204ENST00000423567 TBC1D8O95759 1140 aa13.21□□□□□ -0.29
USP49-204ENST00000423567 MX1P20591 662 aa13.21□□□□□ -0.29
USP49-204ENST00000423567 ADD2P35612 726 aa13.21□□□□□ -0.29
USP49-204ENST00000423567 UBE3CQ15386 1083 aa13.21□□□□□ -0.29
USP49-204ENST00000423567 TSHZ3Q63HK5 1081 aa13.21□□□□□ -0.29
USP49-204ENST00000423567 FOXP4Q8IVH2 680 aaPredicted RBP13.21□□□□□ -0.29
USP49-204ENST00000423567 MS4A4AQ96JQ5 239 aa13.21□□□□□ -0.29
USP49-204ENST00000423567 RIOK1Q9BRS2 568 aaKnown RBP13.21□□□□□ -0.29
USP49-204ENST00000423567 SAP30BPQ9UHR5 308 aaKnown RBP13.21□□□□□ -0.29
USP49-204ENST00000423567 PALD1Q9ULE6 856 aa13.21□□□□□ -0.29
USP49-204ENST00000423567 AK9Q5TCS8 1911 aa13.21□□□□□ -0.3
USP49-204ENST00000423567 IGF2BP3O00425 579 aaKnown RBP eCLIP13.2□□□□□ -0.3
USP49-204ENST00000423567 GALR2O43603 387 aaPredicted RBP13.2□□□□□ -0.3
USP49-204ENST00000423567 NUBP1P53384 320 aa13.2□□□□□ -0.3
USP49-204ENST00000423567 TTC6Q86TZ1 520 aa13.2□□□□□ -0.3
USP49-204ENST00000423567 BRI3BPQ8WY22 251 aa13.2□□□□□ -0.3
USP49-204ENST00000423567 DDRGK1Q96HY6 314 aa13.2□□□□□ -0.3
USP49-204ENST00000423567 CFHR5Q9BXR6 569 aa13.2□□□□□ -0.3
USP49-204ENST00000423567 ZHX2Q9Y6X8 837 aa13.2□□□□□ -0.3
USP49-204ENST00000423567 OTOFQ9HC10 1997 aa13.2□□□□□ -0.3
USP49-204ENST00000423567 DOCK2Q92608 1830 aa13.19□□□□□ -0.3
USP49-204ENST00000423567 TCRBV5S4A2TA0A5A2 114 aa13.19□□□□□ -0.3
USP49-204ENST00000423567 FAM196BA6NMK8 535 aa13.19□□□□□ -0.3
USP49-204ENST00000423567 MBD4O95243 580 aa13.19□□□□□ -0.3
USP49-204ENST00000423567 POLR3DP05423 398 aaPredicted RBP13.19□□□□□ -0.3
USP49-204ENST00000423567 PTPRAP18433 802 aa13.19□□□□□ -0.3
USP49-204ENST00000423567 NOM1Q5C9Z4 860 aaKnown RBP13.19□□□□□ -0.3
USP49-204ENST00000423567 AMOTL1Q8IY63 956 aa13.19□□□□□ -0.3
USP49-204ENST00000423567 KBTBD3Q8NAB2 608 aa13.19□□□□□ -0.3
USP49-204ENST00000423567 KCNH4Q9UQ05 1017 aa13.19□□□□□ -0.3
USP49-204ENST00000423567 GPR25O00155 361 aa13.18□□□□□ -0.3
USP49-204ENST00000423567 CXCL11O14625 94 aa13.18□□□□□ -0.3
USP49-204ENST00000423567 ZFYP08048 801 aaPredicted RBP13.18□□□□□ -0.3
USP49-204ENST00000423567 SLURP2P0DP57 97 aa13.18□□□□□ -0.3
USP49-204ENST00000423567 TAF1CQ15572 869 aaPredicted RBP13.18□□□□□ -0.3
USP49-204ENST00000423567 SLC4A8Q2Y0W8 1093 aa13.18□□□□□ -0.3
USP49-204ENST00000423567 B4GALNT3Q6L9W6 998 aa13.18□□□□□ -0.3
USP49-204ENST00000423567 LCORLQ8N3X6 602 aa13.18□□□□□ -0.3
USP49-204ENST00000423567 OTUD7AQ8TE49 926 aaPredicted RBP13.18□□□□□ -0.3
USP49-204ENST00000423567 PTPN18Q99952 460 aa13.18□□□□□ -0.3
USP49-204ENST00000423567 TBC1D2Q9BYX2 928 aa13.18□□□□□ -0.3
USP49-204ENST00000423567 ARMT1Q9H993 441 aa13.18□□□□□ -0.3
USP49-204ENST00000423567 ZFYVE28Q9HCC9 887 aa13.18□□□□□ -0.3
USP49-204ENST00000423567 ZCCHC17Q9NP64 241 aaKnown RBP13.18□□□□□ -0.3
USP49-204ENST00000423567 MCM9Q9NXL9 1143 aa13.18□□□□□ -0.3
USP49-204ENST00000423567 SERPINB13Q9UIV8 391 aa13.18□□□□□ -0.3
USP49-204ENST00000423567 RNF113AO15541 343 aaKnown RBP13.17□□□□□ -0.3
USP49-204ENST00000423567 FKTNO75072 461 aa13.17□□□□□ -0.3
USP49-204ENST00000423567 CAP2P40123 477 aa13.17□□□□□ -0.3
USP49-204ENST00000423567 IRX6P78412 446 aaPredicted RBP13.17□□□□□ -0.3
USP49-204ENST00000423567 CRHR2Q13324 411 aa13.17□□□□□ -0.3
USP49-204ENST00000423567 DGKZQ13574 1117 aa13.17□□□□□ -0.3
USP49-204ENST00000423567 FASTKD5Q7L8L6 764 aaKnown RBP13.17□□□□□ -0.3
USP49-204ENST00000423567 SMC5Q8IY18 1101 aa13.17□□□□□ -0.3
USP49-204ENST00000423567 PI4K2BQ8TCG2 481 aa13.17□□□□□ -0.3
USP49-204ENST00000423567 ZNF296Q8WUU4 475 aaPredicted RBP13.17□□□□□ -0.3
USP49-204ENST00000423567 FSD1Q9BTV5 496 aa13.17□□□□□ -0.3
USP49-204ENST00000423567 EHD4Q9H223 541 aa13.17□□□□□ -0.3
USP49-204ENST00000423567 AS3MTQ9HBK9 375 aa13.17□□□□□ -0.3
USP49-204ENST00000423567 ATP8A2Q9NTI2 1148 aa13.17□□□□□ -0.3
USP49-204ENST00000423567 GINM1Q9NU53 330 aa13.17□□□□□ -0.3
USP49-204ENST00000423567 TRIM75PA6NK02 468 aa13.16□□□□□ -0.3
USP49-204ENST00000423567 USP17L5A8MUK1 530 aa13.16□□□□□ -0.3
USP49-204ENST00000423567 BTBD19C9JJ37 291 aa13.16□□□□□ -0.3
USP49-204ENST00000423567 ASNSP08243 561 aa13.16□□□□□ -0.3
USP49-204ENST00000423567 ANKRD23Q86SG2 305 aa13.16□□□□□ -0.3
USP49-204ENST00000423567 METTL16Q86W50 562 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 290.6 ms