RNA–Protein interactions for RNA: ENST00000421450.1

TNFAIP3-203, Transcript of TNF alpha induced protein 3, humanhuman

TSL 2

Gene TNFAIP3, Length 421 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-203ENST00000421450 CXCL11O14625 94 aa21.33■■□□□ 1.01
TNFAIP3-203ENST00000421450 HLA-DOAP06340 250 aa21.33■■□□□ 1.01
TNFAIP3-203ENST00000421450 ATP5JP18859 108 aa21.33■■□□□ 1.01
TNFAIP3-203ENST00000421450 SLC4A8Q2Y0W8 1093 aa21.33■■□□□ 1.01
TNFAIP3-203ENST00000421450 CD99L2Q8TCZ2 262 aa21.33■■□□□ 1.01
TNFAIP3-203ENST00000421450 DCTPP1Q9H773 170 aa21.33■■□□□ 1.01
TNFAIP3-203ENST00000421450 ZCCHC17Q9NP64 241 aaKnown RBP21.33■■□□□ 1.01
TNFAIP3-203ENST00000421450 HERC5Q9UII4 1024 aaKnown RBP21.33■■□□□ 1.01
TNFAIP3-203ENST00000421450 TRIM17Q9Y577 477 aa21.33■■□□□ 1.01
TNFAIP3-203ENST00000421450 DOCK1Q14185 1865 aa21.32■■□□□ 1
TNFAIP3-203ENST00000421450 CDK5RAP2Q96SN8 1893 aa21.32■■□□□ 1
TNFAIP3-203ENST00000421450 MAGEB6P1A0A0J9YX57 407 aa21.32■■□□□ 1
TNFAIP3-203ENST00000421450 PDE6AP16499 860 aa21.32■■□□□ 1
TNFAIP3-203ENST00000421450 GADL1Q6ZQY3 521 aa21.32■■□□□ 1
TNFAIP3-203ENST00000421450 ANKRD23Q86SG2 305 aa21.32■■□□□ 1
TNFAIP3-203ENST00000421450 EDC3Q96F86 508 aaKnown RBP21.32■■□□□ 1
TNFAIP3-203ENST00000421450 CRBNQ96SW2 442 aa21.32■■□□□ 1
TNFAIP3-203ENST00000421450 PDHXO00330 501 aa21.31■■□□□ 1
TNFAIP3-203ENST00000421450 CCDC84Q86UT8 332 aaPredicted RBP21.31■■□□□ 1
TNFAIP3-203ENST00000421450 FOXP4Q8IVH2 680 aaPredicted RBP21.31■■□□□ 1
TNFAIP3-203ENST00000421450 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.31■■□□□ 1
TNFAIP3-203ENST00000421450 PCDHB15Q9Y5E8 787 aa21.31■■□□□ 1
TNFAIP3-203ENST00000421450 ZNF532Q9HCE3 1301 aa21.3■■□□□ 1
TNFAIP3-203ENST00000421450 TRIM75PA6NK02 468 aa21.3■■□□□ 1
TNFAIP3-203ENST00000421450 CAP2P40123 477 aa21.3■■□□□ 1
TNFAIP3-203ENST00000421450 FBXO46Q6PJ61 603 aaPredicted RBP21.3■■□□□ 1
TNFAIP3-203ENST00000421450 FASTKD5Q7L8L6 764 aaKnown RBP21.3■■□□□ 1
TNFAIP3-203ENST00000421450 GPATCH3Q96I76 525 aa21.3■■□□□ 1
TNFAIP3-203ENST00000421450 HAUS7Q99871 368 aa21.3■■□□□ 1
TNFAIP3-203ENST00000421450 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.3■■□□□ 1
TNFAIP3-203ENST00000421450 AFG3L2Q9Y4W6 797 aa21.3■■□□□ 1
TNFAIP3-203ENST00000421450 FOCADQ5VW36 1801 aa21.29■■□□□ 1
TNFAIP3-203ENST00000421450 TLR2O60603 784 aa21.29■■□□□ 1
TNFAIP3-203ENST00000421450 ARHGEF6Q15052 776 aa21.29■■□□□ 1
TNFAIP3-203ENST00000421450 CRNKL1Q9BZJ0 848 aaKnown RBP21.29■■□□□ 1
TNFAIP3-203ENST00000421450 EFCC1Q9HA90 598 aa21.29■■□□□ 1
TNFAIP3-203ENST00000421450 ECHDC1Q9NTX5 307 aa21.29■■□□□ 1
TNFAIP3-203ENST00000421450 ZBTB47Q9UFB7 747 aaPredicted RBP21.29■■□□□ 1
TNFAIP3-203ENST00000421450 HPS5Q9UPZ3 1129 aa21.29■■□□□ 1
TNFAIP3-203ENST00000421450 MYH1P12882 1939 aa21.29■■□□□ 1
TNFAIP3-203ENST00000421450 A0A0G2JLL6 359 aaPredicted RBP21.28■■□□□ 1
TNFAIP3-203ENST00000421450 KIF22Q14807 665 aa21.28■■□□□ 1
TNFAIP3-203ENST00000421450 OTOP1Q7RTM1 612 aa21.28■■□□□ 1
TNFAIP3-203ENST00000421450 PRRT2Q7Z6L0 340 aaPredicted RBP21.28■■□□□ 1
TNFAIP3-203ENST00000421450 USP17L5A8MUK1 530 aa21.27■■□□□ 1
TNFAIP3-203ENST00000421450 TTC6Q86TZ1 520 aa21.27■■□□□ 1
TNFAIP3-203ENST00000421450 RIOK1Q9BRS2 568 aaKnown RBP21.27■■□□□ 1
TNFAIP3-203ENST00000421450 AS3MTQ9HBK9 375 aa21.27■■□□□ 1
TNFAIP3-203ENST00000421450 CPA4Q9UI42 421 aa21.27■■□□□ 1
TNFAIP3-203ENST00000421450 ECM2O94769 699 aaPredicted RBP21.26■□□□□ 0.99
TNFAIP3-203ENST00000421450 POLR3DP05423 398 aaPredicted RBP21.26■□□□□ 0.99
TNFAIP3-203ENST00000421450 SPP2Q13103 211 aa21.26■□□□□ 0.99
TNFAIP3-203ENST00000421450 MOGSQ13724 837 aa21.26■□□□□ 0.99
TNFAIP3-203ENST00000421450 RRP1BQ14684 758 aaKnown RBP21.26■□□□□ 0.99
TNFAIP3-203ENST00000421450 PARK7Q99497 189 aaKnown RBP21.26■□□□□ 0.99
TNFAIP3-203ENST00000421450 TBC1D2Q9BYX2 928 aa21.26■□□□□ 0.99
TNFAIP3-203ENST00000421450 ATAD5Q96QE3 1844 aa21.26■□□□□ 0.99
TNFAIP3-203ENST00000421450 GDF11O95390 407 aa21.25■□□□□ 0.99
TNFAIP3-203ENST00000421450 ADD2P35612 726 aa21.25■□□□□ 0.99
TNFAIP3-203ENST00000421450 ZSCAN25Q6NSZ9 544 aa21.25■□□□□ 0.99
TNFAIP3-203ENST00000421450 GPAT2Q6NUI2 795 aa21.25■□□□□ 0.99
TNFAIP3-203ENST00000421450 ZNF280CQ8ND82 737 aa21.25■□□□□ 0.99
TNFAIP3-203ENST00000421450 SIPA1L1O43166 1804 aa21.25■□□□□ 0.99
TNFAIP3-203ENST00000421450 TCRBV5S4A2TA0A5A2 114 aa21.24■□□□□ 0.99
TNFAIP3-203ENST00000421450 ASNSP08243 561 aa21.24■□□□□ 0.99
TNFAIP3-203ENST00000421450 CYP2C8P10632 490 aa21.24■□□□□ 0.99
TNFAIP3-203ENST00000421450 LCORLQ8N3X6 602 aa21.24■□□□□ 0.99
TNFAIP3-203ENST00000421450 DNAJC18Q9H819 358 aa21.24■□□□□ 0.99
TNFAIP3-203ENST00000421450 ARMT1Q9H993 441 aa21.24■□□□□ 0.99
TNFAIP3-203ENST00000421450 MCM9Q9NXL9 1143 aa21.24■□□□□ 0.99
TNFAIP3-203ENST00000421450 SERPINB13Q9UIV8 391 aa21.24■□□□□ 0.99
TNFAIP3-203ENST00000421450 PHIPQ8WWQ0 1821 aa21.24■□□□□ 0.99
TNFAIP3-203ENST00000421450 SOX10P56693 466 aa21.23■□□□□ 0.99
TNFAIP3-203ENST00000421450 TSHZ3Q63HK5 1081 aa21.23■□□□□ 0.99
TNFAIP3-203ENST00000421450 PTPN22Q9Y2R2 807 aa21.23■□□□□ 0.99
TNFAIP3-203ENST00000421450 PTPRFP10586 1907 aa21.22■□□□□ 0.99
TNFAIP3-203ENST00000421450 MBD4O95243 580 aa21.22■□□□□ 0.99
TNFAIP3-203ENST00000421450 HMGCS2P54868 508 aa21.22■□□□□ 0.99
TNFAIP3-203ENST00000421450 SLFNL1Q499Z3 407 aa21.22■□□□□ 0.99
TNFAIP3-203ENST00000421450 C17orf99Q6UX52 265 aa21.22■□□□□ 0.99
TNFAIP3-203ENST00000421450 METTL16Q86W50 562 aaKnown RBP21.22■□□□□ 0.99
TNFAIP3-203ENST00000421450 SMCR8Q8TEV9 937 aaPredicted RBP21.22■□□□□ 0.99
TNFAIP3-203ENST00000421450 SDR42E1Q8WUS8 393 aa21.22■□□□□ 0.99
TNFAIP3-203ENST00000421450 LACTBP83111 547 aaPredicted RBP21.21■□□□□ 0.99
TNFAIP3-203ENST00000421450 UBE3CQ15386 1083 aa21.21■□□□□ 0.99
TNFAIP3-203ENST00000421450 EHD4Q9H223 541 aa21.21■□□□□ 0.99
TNFAIP3-203ENST00000421450 GINM1Q9NU53 330 aa21.21■□□□□ 0.99
TNFAIP3-203ENST00000421450 ZBTB21Q9ULJ3 1066 aa21.21■□□□□ 0.99
TNFAIP3-203ENST00000421450 AGTPBP1Q9UPW5 1226 aa21.21■□□□□ 0.99
TNFAIP3-203ENST00000421450 NAV1Q8NEY1 1877 aa21.21■□□□□ 0.99
TNFAIP3-203ENST00000421450 MYH7P12883 1935 aa21.21■□□□□ 0.99
TNFAIP3-203ENST00000421450 ERC2O15083 957 aa21.2■□□□□ 0.98
TNFAIP3-203ENST00000421450 ANKRD45Q5TZF3 282 aa21.2■□□□□ 0.98
TNFAIP3-203ENST00000421450 PROCA1Q8NCQ7 364 aaPredicted RBP21.2■□□□□ 0.98
TNFAIP3-203ENST00000421450 DDRGK1Q96HY6 314 aa21.2■□□□□ 0.98
TNFAIP3-203ENST00000421450 ARHGAP39Q9C0H5 1083 aa21.2■□□□□ 0.98
TNFAIP3-203ENST00000421450 TMOD4Q9NZQ9 345 aa21.2■□□□□ 0.98
TNFAIP3-203ENST00000421450 PNMA3Q9UL41 463 aa21.2■□□□□ 0.98
TNFAIP3-203ENST00000421450 SLC45A1Q9Y2W3 748 aa21.2■□□□□ 0.98
TNFAIP3-203ENST00000421450 PRKAB2O43741 272 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms