RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 HERC5Q9UII4 1024 aaKnown RBP20.89■□□□□ 0.94
LINC00271-201ENST00000421378 PPARAQ07869 468 aa20.89■□□□□ 0.93
LINC00271-201ENST00000421378 FOXP4Q8IVH2 680 aaPredicted RBP20.89■□□□□ 0.93
LINC00271-201ENST00000421378 U3KPZ7 1027 aaPredicted RBP20.89■□□□□ 0.93
LINC00271-201ENST00000421378 ROBO3Q96MS0 1386 aa20.88■□□□□ 0.93
LINC00271-201ENST00000421378 LAMA4Q16363 1823 aa20.88■□□□□ 0.93
LINC00271-201ENST00000421378 TRPM7Q96QT4 1865 aa20.88■□□□□ 0.93
LINC00271-201ENST00000421378 PPP1R12BO60237 982 aaPredicted RBP20.88■□□□□ 0.93
LINC00271-201ENST00000421378 EIF5BO60841 1220 aaKnown RBP20.88■□□□□ 0.93
LINC00271-201ENST00000421378 CELF2O95319 508 aaKnown RBP20.88■□□□□ 0.93
LINC00271-201ENST00000421378 RBM8AQ9Y5S9 174 aaKnown RBP20.88■□□□□ 0.93
LINC00271-201ENST00000421378 FAM196BA6NMK8 535 aa20.87■□□□□ 0.93
LINC00271-201ENST00000421378 SMIM22K7EJ46 135 aa20.87■□□□□ 0.93
LINC00271-201ENST00000421378 TBC1D12O60347 775 aa20.87■□□□□ 0.93
LINC00271-201ENST00000421378 IMMTQ16891 758 aaKnown RBP20.87■□□□□ 0.93
LINC00271-201ENST00000421378 METTL16Q86W50 562 aaKnown RBP20.87■□□□□ 0.93
LINC00271-201ENST00000421378 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.87■□□□□ 0.93
LINC00271-201ENST00000421378 ZNF213O14771 459 aa20.86■□□□□ 0.93
LINC00271-201ENST00000421378 SLC3A2P08195 630 aaKnown RBP20.86■□□□□ 0.93
LINC00271-201ENST00000421378 SLURP2P0DP57 97 aa20.86■□□□□ 0.93
LINC00271-201ENST00000421378 HAND2P61296 217 aa20.86■□□□□ 0.93
LINC00271-201ENST00000421378 MAP3K10Q02779 954 aa20.86■□□□□ 0.93
LINC00271-201ENST00000421378 GABPAQ06546 454 aa20.86■□□□□ 0.93
LINC00271-201ENST00000421378 PRKG1Q13976 671 aa20.86■□□□□ 0.93
LINC00271-201ENST00000421378 DYNLL2Q96FJ2 89 aa20.86■□□□□ 0.93
LINC00271-201ENST00000421378 DNAJC18Q9H819 358 aa20.86■□□□□ 0.93
LINC00271-201ENST00000421378 ANAPC4Q9UJX5 808 aa20.86■□□□□ 0.93
LINC00271-201ENST00000421378 TAOK2Q9UL54 1235 aa20.86■□□□□ 0.93
LINC00271-201ENST00000421378 FZD1Q9UP38 647 aa20.86■□□□□ 0.93
LINC00271-201ENST00000421378 PAPPA2Q9BXP8 1791 aa20.86■□□□□ 0.93
LINC00271-201ENST00000421378 TTLL12Q14166 644 aaPredicted RBP20.85■□□□□ 0.93
LINC00271-201ENST00000421378 ZNF341Q9BYN7 854 aa20.85■□□□□ 0.93
LINC00271-201ENST00000421378 SWAP70Q9UH65 585 aa20.85■□□□□ 0.93
LINC00271-201ENST00000421378 EPB41L2O43491 1005 aaKnown RBP20.85■□□□□ 0.93
LINC00271-201ENST00000421378 CST9Q5W186 159 aa20.85■□□□□ 0.93
LINC00271-201ENST00000421378 C16orf86Q6ZW13 317 aa20.85■□□□□ 0.93
LINC00271-201ENST00000421378 STK11IPQ8N1F8 1099 aa20.85■□□□□ 0.93
LINC00271-201ENST00000421378 GBA2Q9HCG7 927 aaPredicted RBP20.85■□□□□ 0.93
LINC00271-201ENST00000421378 FKBP1BP68106 108 aa20.84■□□□□ 0.93
LINC00271-201ENST00000421378 CTDSPL2Q05D32 466 aa20.84■□□□□ 0.93
LINC00271-201ENST00000421378 SLC44A5Q8NCS7 719 aa20.84■□□□□ 0.93
LINC00271-201ENST00000421378 ZNF287Q9HBT7 754 aa20.84■□□□□ 0.93
LINC00271-201ENST00000421378 ANGEL1Q9UNK9 670 aaKnown RBP20.84■□□□□ 0.93
LINC00271-201ENST00000421378 USP2O75604 605 aaPredicted RBP20.83■□□□□ 0.92
LINC00271-201ENST00000421378 CYP21A2P08686 494 aa20.83■□□□□ 0.92
LINC00271-201ENST00000421378 IREB2P48200 963 aaKnown RBP20.83■□□□□ 0.92
LINC00271-201ENST00000421378 PDE4BQ07343 736 aa20.83■□□□□ 0.92
LINC00271-201ENST00000421378 NECTIN1Q15223 517 aa20.83■□□□□ 0.92
LINC00271-201ENST00000421378 ARMC9Q7Z3E5 817 aa20.83■□□□□ 0.92
LINC00271-201ENST00000421378 C2orf69Q8N8R5 385 aa20.83■□□□□ 0.92
LINC00271-201ENST00000421378 KLRG1Q96E93 195 aa20.83■□□□□ 0.92
LINC00271-201ENST00000421378 WRNIP1Q96S55 665 aa20.83■□□□□ 0.92
LINC00271-201ENST00000421378 NBPF3Q9H094 633 aa20.83■□□□□ 0.92
LINC00271-201ENST00000421378 SEC24BO95487 1268 aa20.82■□□□□ 0.92
LINC00271-201ENST00000421378 SHMT1P34896 483 aa20.82■□□□□ 0.92
LINC00271-201ENST00000421378 CDK8P49336 464 aa20.82■□□□□ 0.92
LINC00271-201ENST00000421378 MAP3K11Q16584 847 aa20.82■□□□□ 0.92
LINC00271-201ENST00000421378 RNF20Q5VTR2 975 aa20.82■□□□□ 0.92
LINC00271-201ENST00000421378 MYH8P13535 1937 aa20.82■□□□□ 0.92
LINC00271-201ENST00000421378 PHF20L1A8MW92 1017 aa20.81■□□□□ 0.92
LINC00271-201ENST00000421378 TATDN1Q6P1N9 297 aa20.81■□□□□ 0.92
LINC00271-201ENST00000421378 MOB2Q70IA6 237 aa20.81■□□□□ 0.92
LINC00271-201ENST00000421378 TBC1D10CQ8IV04 446 aa20.81■□□□□ 0.92
LINC00271-201ENST00000421378 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.81■□□□□ 0.92
LINC00271-201ENST00000421378 USP26Q9BXU7 913 aa20.81■□□□□ 0.92
LINC00271-201ENST00000421378 MKNK2Q9HBH9 465 aa20.81■□□□□ 0.92
LINC00271-201ENST00000421378 OTOFQ9HC10 1997 aa20.81■□□□□ 0.92
LINC00271-201ENST00000421378 PCP11498 1178 aaKnown RBP20.8■□□□□ 0.92
LINC00271-201ENST00000421378 AKNAD1Q5T1N1 836 aa20.8■□□□□ 0.92
LINC00271-201ENST00000421378 CREB3L3Q68CJ9 461 aa20.8■□□□□ 0.92
LINC00271-201ENST00000421378 MFSD6Q6ZSS7 791 aa20.8■□□□□ 0.92
LINC00271-201ENST00000421378 STAG1Q8WVM7 1258 aa20.8■□□□□ 0.92
LINC00271-201ENST00000421378 RNF41Q9H4P4 317 aaPredicted RBP20.8■□□□□ 0.92
LINC00271-201ENST00000421378 ZNF112Q9UJU3 913 aa20.8■□□□□ 0.92
LINC00271-201ENST00000421378 TMEM88BA6NKF7 163 aa20.8■□□□□ 0.92
LINC00271-201ENST00000421378 SLC27A2O14975 620 aa20.8■□□□□ 0.92
LINC00271-201ENST00000421378 PRDM1O75626 825 aa20.8■□□□□ 0.92
LINC00271-201ENST00000421378 CERKLQ49MI3 558 aaPredicted RBP20.8■□□□□ 0.92
LINC00271-201ENST00000421378 FGRP09769 529 aa20.79■□□□□ 0.92
LINC00271-201ENST00000421378 MCCP23508 829 aa20.79■□□□□ 0.92
LINC00271-201ENST00000421378 INPP5BP32019 993 aa20.79■□□□□ 0.92
LINC00271-201ENST00000421378 HSPA4P34932 840 aa20.79■□□□□ 0.92
LINC00271-201ENST00000421378 ANKRD13AQ8IZ07 590 aa20.79■□□□□ 0.92
LINC00271-201ENST00000421378 TOMM22Q9NS69 142 aa20.79■□□□□ 0.92
LINC00271-201ENST00000421378 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.79■□□□□ 0.92
LINC00271-201ENST00000421378 UBE2Q2LH0YL09 131 aa20.78■□□□□ 0.92
LINC00271-201ENST00000421378 CTNND1O60716 968 aaKnown RBP20.78■□□□□ 0.92
LINC00271-201ENST00000421378 GDF11O95390 407 aa20.78■□□□□ 0.92
LINC00271-201ENST00000421378 ZKSCAN1P17029 563 aaPredicted RBP20.78■□□□□ 0.92
LINC00271-201ENST00000421378 CAP2P40123 477 aa20.78■□□□□ 0.92
LINC00271-201ENST00000421378 APLP1P51693 650 aa20.78■□□□□ 0.92
LINC00271-201ENST00000421378 MAP3K9P80192 1104 aa20.78■□□□□ 0.92
LINC00271-201ENST00000421378 ZKSCAN4Q969J2 545 aaPredicted RBP20.78■□□□□ 0.92
LINC00271-201ENST00000421378 INCENPQ9NQS7 918 aa20.78■□□□□ 0.92
LINC00271-201ENST00000421378 CSADQ9Y600 493 aa20.78■□□□□ 0.92
LINC00271-201ENST00000421378 TAF6LQ9Y6J9 622 aa20.78■□□□□ 0.92
LINC00271-201ENST00000421378 NEDD4P46934 1319 aa20.78■□□□□ 0.92
LINC00271-201ENST00000421378 DOCK1Q14185 1865 aa20.78■□□□□ 0.92
LINC00271-201ENST00000421378 ORC4O43929 436 aa20.77■□□□□ 0.92
LINC00271-201ENST00000421378 RASA1P20936 1047 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms