RNA–Protein interactions for RNA: ENST00000421368.2

MSL3-208, Transcript of MSL complex subunit 3, humanhuman

TSL 5

Gene MSL3, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-208ENST00000421368 FSD1Q9BTV5 496 aa21.5■■□□□ 1.03
MSL3-208ENST00000421368 BEGAINQ9BUH8 593 aa21.5■■□□□ 1.03
MSL3-208ENST00000421368 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.5■■□□□ 1.03
MSL3-208ENST00000421368 PI4KBQ9UBF8 816 aa21.5■■□□□ 1.03
MSL3-208ENST00000421368 CASP8AP2Q9UKL3 1982 aa21.49■■□□□ 1.03
MSL3-208ENST00000421368 PRKAB2O43741 272 aa21.49■■□□□ 1.03
MSL3-208ENST00000421368 ZFYP08048 801 aaPredicted RBP21.49■■□□□ 1.03
MSL3-208ENST00000421368 ERO1BQ86YB8 467 aa21.49■■□□□ 1.03
MSL3-208ENST00000421368 APPBP2Q92624 585 aa21.49■■□□□ 1.03
MSL3-208ENST00000421368 OSBP2Q969R2 916 aa21.49■■□□□ 1.03
MSL3-208ENST00000421368 OTUD5Q96G74 571 aa21.49■■□□□ 1.03
MSL3-208ENST00000421368 OSBPL3Q9H4L5 887 aa21.49■■□□□ 1.03
MSL3-208ENST00000421368 HERC5Q9UII4 1024 aaKnown RBP21.49■■□□□ 1.03
MSL3-208ENST00000421368 MANSC4A6NHS7 340 aaPredicted RBP21.48■■□□□ 1.03
MSL3-208ENST00000421368 PDE4AP27815 886 aa21.48■■□□□ 1.03
MSL3-208ENST00000421368 TM4SF4P48230 202 aa21.48■■□□□ 1.03
MSL3-208ENST00000421368 METTL16Q86W50 562 aaKnown RBP21.48■■□□□ 1.03
MSL3-208ENST00000421368 DNAJC18Q9H819 358 aa21.48■■□□□ 1.03
MSL3-208ENST00000421368 HLA-DOAP06340 250 aa21.47■■□□□ 1.03
MSL3-208ENST00000421368 SREBF2Q12772 1141 aa21.47■■□□□ 1.03
MSL3-208ENST00000421368 LRRFIP1Q32MZ4 808 aaKnown RBP21.47■■□□□ 1.03
MSL3-208ENST00000421368 SCYL3Q8IZE3 742 aa21.47■■□□□ 1.03
MSL3-208ENST00000421368 EVI5LQ96CN4 794 aa21.47■■□□□ 1.03
MSL3-208ENST00000421368 DCP1AQ9NPI6 582 aaPredicted RBP21.47■■□□□ 1.03
MSL3-208ENST00000421368 RNF186Q9NXI6 227 aa21.47■■□□□ 1.03
MSL3-208ENST00000421368 TSKSQ9UJT2 592 aa21.47■■□□□ 1.03
MSL3-208ENST00000421368 CA12O43570 354 aa21.46■■□□□ 1.03
MSL3-208ENST00000421368 CTNND1O60716 968 aaKnown RBP21.46■■□□□ 1.03
MSL3-208ENST00000421368 HSPA8P11142 646 aaKnown RBP21.46■■□□□ 1.03
MSL3-208ENST00000421368 CTCFP49711 727 aaPredicted RBP21.46■■□□□ 1.03
MSL3-208ENST00000421368 PPATQ06203 517 aa21.46■■□□□ 1.03
MSL3-208ENST00000421368 PPIL2Q13356 520 aa21.46■■□□□ 1.03
MSL3-208ENST00000421368 RRP1BQ14684 758 aaKnown RBP21.46■■□□□ 1.03
MSL3-208ENST00000421368 FOXP4Q8IVH2 680 aaPredicted RBP21.46■■□□□ 1.03
MSL3-208ENST00000421368 MS4A4AQ96JQ5 239 aa21.46■■□□□ 1.03
MSL3-208ENST00000421368 STRBPQ96SI9 672 aaKnown RBP21.46■■□□□ 1.03
MSL3-208ENST00000421368 M0R2C6 588 aa21.45■■□□□ 1.02
MSL3-208ENST00000421368 IRF6O14896 467 aa21.45■■□□□ 1.02
MSL3-208ENST00000421368 TRPA1O75762 1119 aa21.45■■□□□ 1.02
MSL3-208ENST00000421368 ZMYM1Q5SVZ6 1142 aa21.45■■□□□ 1.02
MSL3-208ENST00000421368 CRACR2BQ8N4Y2 399 aaPredicted RBP21.45■■□□□ 1.02
MSL3-208ENST00000421368 ATP8A2Q9NTI2 1148 aa21.45■■□□□ 1.02
MSL3-208ENST00000421368 MCM9Q9NXL9 1143 aa21.45■■□□□ 1.02
MSL3-208ENST00000421368 SAGE1Q9NXZ1 904 aa21.45■■□□□ 1.02
MSL3-208ENST00000421368 SLC4A4Q9Y6R1 1079 aa21.45■■□□□ 1.02
MSL3-208ENST00000421368 CENPBP07199 599 aaPredicted RBP21.44■■□□□ 1.02
MSL3-208ENST00000421368 PLCD1P51178 756 aa21.44■■□□□ 1.02
MSL3-208ENST00000421368 INHBEP58166 350 aa21.44■■□□□ 1.02
MSL3-208ENST00000421368 EVX2Q03828 476 aa21.44■■□□□ 1.02
MSL3-208ENST00000421368 TTC6Q86TZ1 520 aa21.44■■□□□ 1.02
MSL3-208ENST00000421368 SEC62Q99442 399 aaKnown RBP21.44■■□□□ 1.02
MSL3-208ENST00000421368 EHD4Q9H223 541 aa21.44■■□□□ 1.02
MSL3-208ENST00000421368 PICK1Q9NRD5 415 aa21.44■■□□□ 1.02
MSL3-208ENST00000421368 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.44■■□□□ 1.02
MSL3-208ENST00000421368 TESPA1A2RU30 521 aaPredicted RBP21.43■■□□□ 1.02
MSL3-208ENST00000421368 IGF2BP3O00425 579 aaKnown RBP eCLIP21.43■■□□□ 1.02
MSL3-208ENST00000421368 GPAA1O43292 621 aa21.43■■□□□ 1.02
MSL3-208ENST00000421368 POLR3DP05423 398 aaPredicted RBP21.43■■□□□ 1.02
MSL3-208ENST00000421368 CYP2D6P10635 497 aa21.43■■□□□ 1.02
MSL3-208ENST00000421368 PTPRAP18433 802 aa21.43■■□□□ 1.02
MSL3-208ENST00000421368 CAP2P40123 477 aa21.43■■□□□ 1.02
MSL3-208ENST00000421368 GTF2A2P52657 109 aa21.43■■□□□ 1.02
MSL3-208ENST00000421368 LBX1P52954 281 aa21.43■■□□□ 1.02
MSL3-208ENST00000421368 IFNL1Q8IU54 200 aa21.43■■□□□ 1.02
MSL3-208ENST00000421368 BRI3BPQ8WY22 251 aa21.43■■□□□ 1.02
MSL3-208ENST00000421368 TRIM34Q9BYJ4 488 aa21.43■■□□□ 1.02
MSL3-208ENST00000421368 SERPINB13Q9UIV8 391 aa21.43■■□□□ 1.02
MSL3-208ENST00000421368 CCL15-CCL14A0A0B4J2E2 113 aa21.42■■□□□ 1.02
MSL3-208ENST00000421368 TRIM6-TRIM34B2RNG4 842 aa21.42■■□□□ 1.02
MSL3-208ENST00000421368 CCL15Q16663 113 aa21.42■■□□□ 1.02
MSL3-208ENST00000421368 CCDC84Q86UT8 332 aaPredicted RBP21.42■■□□□ 1.02
MSL3-208ENST00000421368 PTPN18Q99952 460 aa21.42■■□□□ 1.02
MSL3-208ENST00000421368 KCNH4Q9UQ05 1017 aa21.42■■□□□ 1.02
MSL3-208ENST00000421368 GSG1L2A8MUP6 293 aa21.41■■□□□ 1.02
MSL3-208ENST00000421368 JAG1P78504 1218 aa21.41■■□□□ 1.02
MSL3-208ENST00000421368 SNAPC2Q13487 334 aa21.41■■□□□ 1.02
MSL3-208ENST00000421368 RILPL2Q969X0 211 aa21.41■■□□□ 1.02
MSL3-208ENST00000421368 ZHX2Q9Y6X8 837 aa21.41■■□□□ 1.02
MSL3-208ENST00000421368 GABPAQ06546 454 aa21.4■■□□□ 1.02
MSL3-208ENST00000421368 SHROOM1Q2M3G4 852 aaPredicted RBP21.4■■□□□ 1.02
MSL3-208ENST00000421368 TATDN1Q6P1N9 297 aa21.4■■□□□ 1.02
MSL3-208ENST00000421368 LOC285556D6RIA3 1793 aa21.39■■□□□ 1.01
MSL3-208ENST00000421368 CYP2D7A0A087X1C5 515 aa21.39■■□□□ 1.01
MSL3-208ENST00000421368 USP17L12C9JPN9 530 aa21.39■■□□□ 1.01
MSL3-208ENST00000421368 USP17L21D6R901 530 aa21.39■■□□□ 1.01
MSL3-208ENST00000421368 SMIM22K7EJ46 135 aa21.39■■□□□ 1.01
MSL3-208ENST00000421368 GDF11O95390 407 aa21.39■■□□□ 1.01
MSL3-208ENST00000421368 NEFLP07196 543 aa21.39■■□□□ 1.01
MSL3-208ENST00000421368 CETPP11597 493 aa21.39■■□□□ 1.01
MSL3-208ENST00000421368 SHMT1P34896 483 aa21.39■■□□□ 1.01
MSL3-208ENST00000421368 TICAM2Q86XR7 235 aa21.39■■□□□ 1.01
MSL3-208ENST00000421368 DDRGK1Q96HY6 314 aa21.39■■□□□ 1.01
MSL3-208ENST00000421368 EPB41L4AQ9HCS5 686 aaPredicted RBP21.39■■□□□ 1.01
MSL3-208ENST00000421368 PRDM10Q9NQV6 1147 aa21.39■■□□□ 1.01
MSL3-208ENST00000421368 AFG3L2Q9Y4W6 797 aa21.39■■□□□ 1.01
MSL3-208ENST00000421368 TBC1D8O95759 1140 aa21.38■■□□□ 1.01
MSL3-208ENST00000421368 GNAT2P19087 354 aa21.38■■□□□ 1.01
MSL3-208ENST00000421368 C12orf60Q5U649 245 aa21.38■■□□□ 1.01
MSL3-208ENST00000421368 CTR9Q6PD62 1173 aa21.38■■□□□ 1.01
MSL3-208ENST00000421368 CCDC129Q6ZRS4 1044 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms