RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 PTPRFP10586 1907 aa17.35■□□□□ 0.37
PTPN18-204ENST00000420717 M0R2C6 588 aa17.35■□□□□ 0.37
PTPN18-204ENST00000420717 GPAA1O43292 621 aa17.35■□□□□ 0.37
PTPN18-204ENST00000420717 HLA-DOAP06340 250 aa17.35■□□□□ 0.37
PTPN18-204ENST00000420717 GSPT1P15170 499 aaKnown RBP17.35■□□□□ 0.37
PTPN18-204ENST00000420717 INPP5BP32019 993 aa17.35■□□□□ 0.37
PTPN18-204ENST00000420717 PAXIP1Q6ZW49 1069 aaPredicted RBP17.35■□□□□ 0.37
PTPN18-204ENST00000420717 SDR42E1Q8WUS8 393 aa17.35■□□□□ 0.37
PTPN18-204ENST00000420717 SLC10A4Q96EP9 437 aa17.35■□□□□ 0.37
PTPN18-204ENST00000420717 PALD1Q9ULE6 856 aa17.35■□□□□ 0.37
PTPN18-204ENST00000420717 ROBO3Q96MS0 1386 aa17.35■□□□□ 0.37
PTPN18-204ENST00000420717 CTNND1O60716 968 aaKnown RBP17.34■□□□□ 0.37
PTPN18-204ENST00000420717 AOC2O75106 756 aa17.34■□□□□ 0.37
PTPN18-204ENST00000420717 MYH8P13535 1937 aa17.34■□□□□ 0.37
PTPN18-204ENST00000420717 GJA5P36382 358 aa17.34■□□□□ 0.37
PTPN18-204ENST00000420717 MAP2K1Q02750 393 aaPredicted RBP17.34■□□□□ 0.37
PTPN18-204ENST00000420717 GABPAQ06546 454 aa17.34■□□□□ 0.37
PTPN18-204ENST00000420717 TTC6Q86TZ1 520 aa17.34■□□□□ 0.37
PTPN18-204ENST00000420717 ERO1BQ86YB8 467 aa17.34■□□□□ 0.37
PTPN18-204ENST00000420717 SCYL3Q8IZE3 742 aa17.34■□□□□ 0.37
PTPN18-204ENST00000420717 CCDC136Q96JN2 1154 aa17.34■□□□□ 0.37
PTPN18-204ENST00000420717 HELLSQ9NRZ9 838 aa17.34■□□□□ 0.37
PTPN18-204ENST00000420717 GINM1Q9NU53 330 aa17.34■□□□□ 0.37
PTPN18-204ENST00000420717 WBP1LQ9NX94 342 aa17.34■□□□□ 0.37
PTPN18-204ENST00000420717 GSG1L2A8MUP6 293 aa17.33■□□□□ 0.36
PTPN18-204ENST00000420717 PRKAB2O43741 272 aa17.33■□□□□ 0.36
PTPN18-204ENST00000420717 TATDN1Q6P1N9 297 aa17.33■□□□□ 0.36
PTPN18-204ENST00000420717 ZKSCAN4Q969J2 545 aaPredicted RBP17.33■□□□□ 0.36
PTPN18-204ENST00000420717 OPTNQ96CV9 577 aa17.33■□□□□ 0.36
PTPN18-204ENST00000420717 ZIC5Q96T25 663 aa17.33■□□□□ 0.36
PTPN18-204ENST00000420717 ELP3Q9H9T3 547 aa17.33■□□□□ 0.36
PTPN18-204ENST00000420717 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.33■□□□□ 0.36
PTPN18-204ENST00000420717 SERPINB13Q9UIV8 391 aa17.33■□□□□ 0.36
PTPN18-204ENST00000420717 SLC4A4Q9Y6R1 1079 aa17.33■□□□□ 0.36
PTPN18-204ENST00000420717 LOC285556D6RIA3 1793 aa17.33■□□□□ 0.36
PTPN18-204ENST00000420717 ZMYM6O95789 1325 aa17.32■□□□□ 0.36
PTPN18-204ENST00000420717 GREB1LQ9C091 1923 aaPredicted RBP17.32■□□□□ 0.36
PTPN18-204ENST00000420717 TESPA1A2RU30 521 aaPredicted RBP17.32■□□□□ 0.36
PTPN18-204ENST00000420717 TRIM6-TRIM34B2RNG4 842 aa17.32■□□□□ 0.36
PTPN18-204ENST00000420717 HIP1O00291 1037 aa17.32■□□□□ 0.36
PTPN18-204ENST00000420717 KIF23Q02241 960 aaPredicted RBP17.32■□□□□ 0.36
PTPN18-204ENST00000420717 PPATQ06203 517 aa17.32■□□□□ 0.36
PTPN18-204ENST00000420717 PPIL2Q13356 520 aa17.32■□□□□ 0.36
PTPN18-204ENST00000420717 SBK1Q52WX2 424 aa17.32■□□□□ 0.36
PTPN18-204ENST00000420717 MCM9Q9NXL9 1143 aa17.32■□□□□ 0.36
PTPN18-204ENST00000420717 ARPP21Q9UBL0 812 aaPredicted RBP17.32■□□□□ 0.36
PTPN18-204ENST00000420717 SAP30BPQ9UHR5 308 aaKnown RBP17.32■□□□□ 0.36
PTPN18-204ENST00000420717 LAMA4Q16363 1823 aa17.31■□□□□ 0.36
PTPN18-204ENST00000420717 A0A0D9SFI3 127 aa17.31■□□□□ 0.36
PTPN18-204ENST00000420717 MANSC4A6NHS7 340 aaPredicted RBP17.31■□□□□ 0.36
PTPN18-204ENST00000420717 FOXP2O15409 715 aa17.31■□□□□ 0.36
PTPN18-204ENST00000420717 SLURP2P0DP57 97 aa17.31■□□□□ 0.36
PTPN18-204ENST00000420717 SDSP20132 328 aa17.31■□□□□ 0.36
PTPN18-204ENST00000420717 CAP2P40123 477 aa17.31■□□□□ 0.36
PTPN18-204ENST00000420717 TM4SF4P48230 202 aa17.31■□□□□ 0.36
PTPN18-204ENST00000420717 SREBF2Q12772 1141 aa17.31■□□□□ 0.36
PTPN18-204ENST00000420717 C12orf60Q5U649 245 aa17.31■□□□□ 0.36
PTPN18-204ENST00000420717 SEC62Q99442 399 aaKnown RBP17.31■□□□□ 0.36
PTPN18-204ENST00000420717 TBC1D2Q9BYX2 928 aa17.31■□□□□ 0.36
PTPN18-204ENST00000420717 EPB41L4AQ9HCS5 686 aaPredicted RBP17.31■□□□□ 0.36
PTPN18-204ENST00000420717 SAGE1Q9NXZ1 904 aa17.31■□□□□ 0.36
PTPN18-204ENST00000420717 PPP4R2Q9NY27 417 aa17.31■□□□□ 0.36
PTPN18-204ENST00000420717 KCNH4Q9UQ05 1017 aa17.31■□□□□ 0.36
PTPN18-204ENST00000420717 FAM196BA6NMK8 535 aa17.3■□□□□ 0.36
PTPN18-204ENST00000420717 CA12O43570 354 aa17.3■□□□□ 0.36
PTPN18-204ENST00000420717 PLCD1P51178 756 aa17.3■□□□□ 0.36
PTPN18-204ENST00000420717 INHBEP58166 350 aa17.3■□□□□ 0.36
PTPN18-204ENST00000420717 RILPL2Q969X0 211 aa17.3■□□□□ 0.36
PTPN18-204ENST00000420717 DDRGK1Q96HY6 314 aa17.3■□□□□ 0.36
PTPN18-204ENST00000420717 MS4A4AQ96JQ5 239 aa17.3■□□□□ 0.36
PTPN18-204ENST00000420717 CFHR5Q9BXR6 569 aa17.3■□□□□ 0.36
PTPN18-204ENST00000420717 PATL2C9JE40 543 aaKnown RBP17.29■□□□□ 0.36
PTPN18-204ENST00000420717 PTPRAP18433 802 aa17.29■□□□□ 0.36
PTPN18-204ENST00000420717 SHMT1P34896 483 aa17.29■□□□□ 0.36
PTPN18-204ENST00000420717 GRM1Q13255 1194 aa17.29■□□□□ 0.36
PTPN18-204ENST00000420717 NMIQ13287 307 aaPredicted RBP17.29■□□□□ 0.36
PTPN18-204ENST00000420717 RRP1BQ14684 758 aaKnown RBP17.29■□□□□ 0.36
PTPN18-204ENST00000420717 MCMDC2Q4G0Z9 681 aa17.29■□□□□ 0.36
PTPN18-204ENST00000420717 CTR9Q6PD62 1173 aa17.29■□□□□ 0.36
PTPN18-204ENST00000420717 CRACR2BQ8N4Y2 399 aaPredicted RBP17.29■□□□□ 0.36
PTPN18-204ENST00000420717 CNKSR2Q8WXI2 1034 aa17.29■□□□□ 0.36
PTPN18-204ENST00000420717 FAM227BQ96M60 508 aa17.29■□□□□ 0.36
PTPN18-204ENST00000420717 SWAP70Q9UH65 585 aa17.29■□□□□ 0.36
PTPN18-204ENST00000420717 CCDC171Q6TFL3 1326 aa17.28■□□□□ 0.36
PTPN18-204ENST00000420717 RAD50Q92878 1312 aa17.28■□□□□ 0.36
PTPN18-204ENST00000420717 POLR3DP05423 398 aaPredicted RBP17.28■□□□□ 0.36
PTPN18-204ENST00000420717 GTF2A2P52657 109 aa17.28■□□□□ 0.36
PTPN18-204ENST00000420717 ALX1Q15699 326 aa17.28■□□□□ 0.36
PTPN18-204ENST00000420717 C16orf86Q6ZW13 317 aa17.28■□□□□ 0.36
PTPN18-204ENST00000420717 AMOTL1Q8IY63 956 aa17.28■□□□□ 0.36
PTPN18-204ENST00000420717 OTUD5Q96G74 571 aa17.28■□□□□ 0.36
PTPN18-204ENST00000420717 PICK1Q9NRD5 415 aa17.28■□□□□ 0.36
PTPN18-204ENST00000420717 USP17L12C9JPN9 530 aa17.27■□□□□ 0.36
PTPN18-204ENST00000420717 USP17L21D6R901 530 aa17.27■□□□□ 0.36
PTPN18-204ENST00000420717 IRF6O14896 467 aa17.27■□□□□ 0.36
PTPN18-204ENST00000420717 ASNSP08243 561 aa17.27■□□□□ 0.36
PTPN18-204ENST00000420717 HSPA1AP0DMV8 641 aaKnown RBP17.27■□□□□ 0.36
PTPN18-204ENST00000420717 HSPA1BP0DMV9 641 aaKnown RBP17.27■□□□□ 0.36
PTPN18-204ENST00000420717 EVX2Q03828 476 aa17.27■□□□□ 0.36
PTPN18-204ENST00000420717 BMP2KLQ5H9B9 411 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms