RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 SSRP1Q08945 709 aaKnown RBP10.22□□□□□ -0.77
SNCA-206ENST00000420646 MSL1Q68DK7 614 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 C11orf57Q6ZUT1 292 aaPredicted RBP10.22□□□□□ -0.77
SNCA-206ENST00000420646 SLC44A5Q8NCS7 719 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 ENGASEQ8NFI3 743 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 SH3RF3Q8TEJ3 882 aaPredicted RBP10.22□□□□□ -0.77
SNCA-206ENST00000420646 RTEL1Q9NZ71 1219 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 SAP30BPQ9UHR5 308 aaKnown RBP10.22□□□□□ -0.77
SNCA-206ENST00000420646 CACNA1SQ13698 1873 aa10.22□□□□□ -0.77
SNCA-206ENST00000420646 DOCK2Q92608 1830 aa10.21□□□□□ -0.77
SNCA-206ENST00000420646 FAM205CA6NFA0 338 aa10.21□□□□□ -0.77
SNCA-206ENST00000420646 MSNP26038 577 aaKnown RBP10.21□□□□□ -0.77
SNCA-206ENST00000420646 SART3Q15020 963 aaKnown RBP10.21□□□□□ -0.77
SNCA-206ENST00000420646 SEC23AQ15436 765 aa10.21□□□□□ -0.77
SNCA-206ENST00000420646 TXNRD1Q16881 649 aa10.21□□□□□ -0.77
SNCA-206ENST00000420646 ANO1Q5XXA6 986 aa10.21□□□□□ -0.77
SNCA-206ENST00000420646 CPLX2Q6PUV4 134 aaKnown RBP10.21□□□□□ -0.77
SNCA-206ENST00000420646 SASS6Q6UVJ0 657 aa10.21□□□□□ -0.77
SNCA-206ENST00000420646 CCDC73Q6ZRK6 1079 aa10.21□□□□□ -0.77
SNCA-206ENST00000420646 ESR2Q92731 530 aa10.21□□□□□ -0.77
SNCA-206ENST00000420646 IRS2Q9Y4H2 1338 aa10.21□□□□□ -0.77
SNCA-206ENST00000420646 CASZ1Q86V15 1759 aa10.21□□□□□ -0.77
SNCA-206ENST00000420646 SCN7AQ01118 1682 aa10.21□□□□□ -0.78
SNCA-206ENST00000420646 NOM1Q5C9Z4 860 aaKnown RBP10.21□□□□□ -0.78
SNCA-206ENST00000420646 ZSCAN10Q96SZ4 725 aaPredicted RBP10.21□□□□□ -0.78
SNCA-206ENST00000420646 SDF4Q9BRK5 362 aa10.21□□□□□ -0.78
SNCA-206ENST00000420646 VPS54Q9P1Q0 977 aa10.21□□□□□ -0.78
SNCA-206ENST00000420646 POLLQ9UGP5 575 aa10.21□□□□□ -0.78
SNCA-206ENST00000420646 C4BP0C0L5 1744 aa10.21□□□□□ -0.78
SNCA-206ENST00000420646 MYH13Q9UKX3 1938 aa10.21□□□□□ -0.78
SNCA-206ENST00000420646 C4AP0C0L4 1744 aa10.21□□□□□ -0.78
SNCA-206ENST00000420646 KINO60870 393 aaKnown RBP10.2□□□□□ -0.78
SNCA-206ENST00000420646 ZNF165P49910 485 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 GRIN1Q05586 938 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 ZNF827Q17R98 1081 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 IFIT1BQ5T764 474 aaKnown RBP10.2□□□□□ -0.78
SNCA-206ENST00000420646 RASGRP2Q7LDG7 609 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 NBPF11Q86T75 865 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 CRACR2BQ8N4Y2 399 aaPredicted RBP10.2□□□□□ -0.78
SNCA-206ENST00000420646 TGFBRAP1Q8WUH2 860 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 MXD3Q9BW11 206 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.2□□□□□ -0.78
SNCA-206ENST00000420646 V9GY48 417 aaPredicted RBP10.2□□□□□ -0.78
SNCA-206ENST00000420646 MROH7-TTC4A0A0A0MT08 1334 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 F8W031 263 aaPredicted RBP10.2□□□□□ -0.78
SNCA-206ENST00000420646 C6orf229H3BNL8 230 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 ADAMTS3O15072 1205 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 CDKL5O76039 1030 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 LDHBP07195 334 aaKnown RBP10.2□□□□□ -0.78
SNCA-206ENST00000420646 MAPKAPK5Q8IW41 473 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 DIS3L2Q8IYB7 885 aaKnown RBP10.2□□□□□ -0.78
SNCA-206ENST00000420646 FAM200AQ8TCP9 573 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.2□□□□□ -0.78
SNCA-206ENST00000420646 RNF41Q9H4P4 317 aaPredicted RBP10.2□□□□□ -0.78
SNCA-206ENST00000420646 NHSQ6T4R5 1651 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 MYH2Q9UKX2 1941 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 FMNL1O95466 1100 aaPredicted RBP10.2□□□□□ -0.78
SNCA-206ENST00000420646 IFNAR1P17181 557 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 PLCD1P51178 756 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 FAM160A1Q05DH4 1040 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 TRIM29Q14134 588 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 EARS2Q5JPH6 523 aaKnown RBP10.2□□□□□ -0.78
SNCA-206ENST00000420646 AXDND1Q5T1B0 1012 aaPredicted RBP10.2□□□□□ -0.78
SNCA-206ENST00000420646 ADALQ6DHV7 355 aa10.2□□□□□ -0.78
SNCA-206ENST00000420646 FMR1NBQ8N0W7 255 aaPredicted RBP10.2□□□□□ -0.78
SNCA-206ENST00000420646 MRPS27Q92552 414 aaKnown RBP10.2□□□□□ -0.78
SNCA-206ENST00000420646 NOL7Q9UMY1 257 aaKnown RBP10.2□□□□□ -0.78
SNCA-206ENST00000420646 BRIP1Q9BX63 1249 aa10.19□□□□□ -0.78
SNCA-206ENST00000420646 CRNKL1Q9BZJ0 848 aaKnown RBP10.19□□□□□ -0.78
SNCA-206ENST00000420646 XDHP47989 1333 aa10.19□□□□□ -0.78
SNCA-206ENST00000420646 USP17L3A6NCW0 530 aa10.19□□□□□ -0.78
SNCA-206ENST00000420646 USP17L4A6NCW7 530 aa10.19□□□□□ -0.78
SNCA-206ENST00000420646 SLURP2P0DP57 97 aa10.19□□□□□ -0.78
SNCA-206ENST00000420646 USP5P45974 858 aa10.19□□□□□ -0.78
SNCA-206ENST00000420646 TOB1P50616 345 aaPredicted RBP10.19□□□□□ -0.78
SNCA-206ENST00000420646 RBM43Q6ZSC3 357 aaKnown RBP10.19□□□□□ -0.78
SNCA-206ENST00000420646 USP17L1Q7RTZ2 530 aa10.19□□□□□ -0.78
SNCA-206ENST00000420646 NAP1L5Q96NT1 182 aaPredicted RBP10.19□□□□□ -0.78
SNCA-206ENST00000420646 CD209Q9NNX6 404 aa10.19□□□□□ -0.78
SNCA-206ENST00000420646 POLR3EQ9NVU0 708 aa10.19□□□□□ -0.78
SNCA-206ENST00000420646 ZNF219Q9P2Y4 722 aaPredicted RBP10.19□□□□□ -0.78
SNCA-206ENST00000420646 NRBP1Q9UHY1 535 aa10.19□□□□□ -0.78
SNCA-206ENST00000420646 TAF1LQ8IZX4 1826 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 TSPY2A6NKD2 308 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 POLRMTO00411 1230 aaKnown RBP10.18□□□□□ -0.78
SNCA-206ENST00000420646 WNT7AO00755 349 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 ST5P78524 1137 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 TROAPQ12815 778 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 BRAPQ7Z569 592 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 TDRD7Q8NHU6 1098 aaKnown RBP10.18□□□□□ -0.78
SNCA-206ENST00000420646 CPVLQ9H3G5 476 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 CABP5Q9NP86 173 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 ANAPC4Q9UJX5 808 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 ZKSCAN5Q9Y2L8 839 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 SEMA3EO15041 775 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 PFKFB1P16118 471 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 UVSSAQ2YD98 709 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 SHC4Q6S5L8 630 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 IQCA1Q86XH1 822 aa10.18□□□□□ -0.78
SNCA-206ENST00000420646 COL23A1Q86Y22 540 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms