RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 MEIS3Q99687 375 aa17.68■□□□□ 0.42
NFE4-201ENST00000420058 SMC4Q9NTJ3 1288 aa17.68■□□□□ 0.42
NFE4-201ENST00000420058 A0A1B0GUL7 405 aa17.67■□□□□ 0.42
NFE4-201ENST00000420058 ZNF316A6NFI3 1004 aaPredicted RBP17.67■□□□□ 0.42
NFE4-201ENST00000420058 TFCP2Q12800 502 aa17.67■□□□□ 0.42
NFE4-201ENST00000420058 SPP2Q13103 211 aa17.67■□□□□ 0.42
NFE4-201ENST00000420058 PROCA1Q8NCQ7 364 aaPredicted RBP17.67■□□□□ 0.42
NFE4-201ENST00000420058 TRIM32Q13049 653 aa17.66■□□□□ 0.42
NFE4-201ENST00000420058 SPTY2D1Q68D10 685 aaPredicted RBP17.66■□□□□ 0.42
NFE4-201ENST00000420058 PI16Q6UXB8 463 aa17.66■□□□□ 0.42
NFE4-201ENST00000420058 TBC1D9Q6ZT07 1266 aa17.66■□□□□ 0.42
NFE4-201ENST00000420058 SLF2Q8IX21 1173 aa17.66■□□□□ 0.42
NFE4-201ENST00000420058 COA7Q96BR5 231 aa17.66■□□□□ 0.42
NFE4-201ENST00000420058 GDF15Q99988 308 aa17.66■□□□□ 0.42
NFE4-201ENST00000420058 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.66■□□□□ 0.42
NFE4-201ENST00000420058 HMG20BQ9P0W2 317 aa17.66■□□□□ 0.42
NFE4-201ENST00000420058 DOCK1Q14185 1865 aa17.65■□□□□ 0.42
NFE4-201ENST00000420058 ALPK3Q96L96 1907 aa17.65■□□□□ 0.42
NFE4-201ENST00000420058 ERICH6Q7L0X2 663 aa17.65■□□□□ 0.42
NFE4-201ENST00000420058 ZNF280CQ8ND82 737 aa17.65■□□□□ 0.42
NFE4-201ENST00000420058 NSUN4Q96CB9 384 aaKnown RBP17.65■□□□□ 0.42
NFE4-201ENST00000420058 OSBPL5Q9H0X9 879 aaPredicted RBP17.65■□□□□ 0.42
NFE4-201ENST00000420058 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.65■□□□□ 0.42
NFE4-201ENST00000420058 CAP2P40123 477 aa17.64■□□□□ 0.41
NFE4-201ENST00000420058 HMGCS2P54868 508 aa17.64■□□□□ 0.41
NFE4-201ENST00000420058 JAG1P78504 1218 aa17.64■□□□□ 0.41
NFE4-201ENST00000420058 SH3D19Q5HYK7 790 aa17.64■□□□□ 0.41
NFE4-201ENST00000420058 NECAB2Q7Z6G3 386 aa17.64■□□□□ 0.41
NFE4-201ENST00000420058 ASCC2Q9H1I8 757 aaPredicted RBP17.64■□□□□ 0.41
NFE4-201ENST00000420058 TAOK2Q9UL54 1235 aa17.64■□□□□ 0.41
NFE4-201ENST00000420058 UNC80Q8N2C7 3258 aa17.64■□□□□ 0.41
NFE4-201ENST00000420058 PEX10O60683 326 aa17.63■□□□□ 0.41
NFE4-201ENST00000420058 BMP8BP34820 402 aa17.63■□□□□ 0.41
NFE4-201ENST00000420058 GCLCP48506 637 aaPredicted RBP17.63■□□□□ 0.41
NFE4-201ENST00000420058 MTX1Q13505 466 aa17.63■□□□□ 0.41
NFE4-201ENST00000420058 PNMA3Q9UL41 463 aa17.63■□□□□ 0.41
NFE4-201ENST00000420058 MAP4K4O95819 1239 aaPredicted RBP17.62■□□□□ 0.41
NFE4-201ENST00000420058 HMGCRP04035 888 aa17.62■□□□□ 0.41
NFE4-201ENST00000420058 MVPQ14764 893 aaKnown RBP17.62■□□□□ 0.41
NFE4-201ENST00000420058 ANKLE1Q8NAG6 615 aa17.62■□□□□ 0.41
NFE4-201ENST00000420058 SPATA5Q8NB90 893 aa17.62■□□□□ 0.41
NFE4-201ENST00000420058 SLC17A8Q8NDX2 589 aa17.62■□□□□ 0.41
NFE4-201ENST00000420058 API5Q9BZZ5 524 aaKnown RBP17.62■□□□□ 0.41
NFE4-201ENST00000420058 MORF4L1Q9UBU8 362 aa17.62■□□□□ 0.41
NFE4-201ENST00000420058 AKAP2Q9Y2D5 859 aa17.62■□□□□ 0.41
NFE4-201ENST00000420058 USP17L5A8MUK1 530 aa17.61■□□□□ 0.41
NFE4-201ENST00000420058 DLL1O00548 723 aa17.61■□□□□ 0.41
NFE4-201ENST00000420058 SRGAP3O43295 1099 aa17.61■□□□□ 0.41
NFE4-201ENST00000420058 MAP3K21Q5TCX8 1036 aa17.61■□□□□ 0.41
NFE4-201ENST00000420058 POTEEQ6S8J3 1075 aa17.61■□□□□ 0.41
NFE4-201ENST00000420058 P2RX7Q99572 595 aaKnown RBP17.61■□□□□ 0.41
NFE4-201ENST00000420058 RPTORQ8N122 1335 aa17.61■□□□□ 0.41
NFE4-201ENST00000420058 COL2A1P02458 1487 aaPredicted RBP17.61■□□□□ 0.41
NFE4-201ENST00000420058 LDHCP07864 332 aa17.6■□□□□ 0.41
NFE4-201ENST00000420058 ARID4AP29374 1257 aaPredicted RBP17.6■□□□□ 0.41
NFE4-201ENST00000420058 SHROOM1Q2M3G4 852 aaPredicted RBP17.6■□□□□ 0.41
NFE4-201ENST00000420058 SH3RF3Q8TEJ3 882 aaPredicted RBP17.6■□□□□ 0.41
NFE4-201ENST00000420058 TRIB2Q92519 343 aa17.6■□□□□ 0.41
NFE4-201ENST00000420058 NEUROD6Q96NK8 337 aa17.6■□□□□ 0.41
NFE4-201ENST00000420058 WDR18Q9BV38 432 aa17.6■□□□□ 0.41
NFE4-201ENST00000420058 TXNRD2Q9NNW7 524 aa17.6■□□□□ 0.41
NFE4-201ENST00000420058 OGDHLQ9ULD0 1010 aa17.6■□□□□ 0.41
NFE4-201ENST00000420058 ZMYND8Q9ULU4 1186 aaPredicted RBP17.6■□□□□ 0.41
NFE4-201ENST00000420058 HDAC5Q9UQL6 1122 aa17.6■□□□□ 0.41
NFE4-201ENST00000420058 PLXNB2O15031 1838 aa17.6■□□□□ 0.41
NFE4-201ENST00000420058 LOC285556D6RIA3 1793 aa17.59■□□□□ 0.41
NFE4-201ENST00000420058 CT47B1P0C2W7 299 aaPredicted RBP17.59■□□□□ 0.41
NFE4-201ENST00000420058 HOXA7P31268 230 aaPredicted RBP17.59■□□□□ 0.41
NFE4-201ENST00000420058 MCAMP43121 646 aa17.59■□□□□ 0.41
NFE4-201ENST00000420058 RARSP54136 660 aaKnown RBP17.59■□□□□ 0.41
NFE4-201ENST00000420058 METTL16Q86W50 562 aaKnown RBP17.59■□□□□ 0.41
NFE4-201ENST00000420058 C7orf61Q8IZ16 206 aa17.59■□□□□ 0.41
NFE4-201ENST00000420058 TBC1D2Q9BYX2 928 aa17.59■□□□□ 0.41
NFE4-201ENST00000420058 NBPF3Q9H094 633 aa17.59■□□□□ 0.41
NFE4-201ENST00000420058 DNAJC18Q9H819 358 aa17.59■□□□□ 0.41
NFE4-201ENST00000420058 HMX1Q9NP08 348 aaPredicted RBP17.59■□□□□ 0.41
NFE4-201ENST00000420058 BACE1P56817 501 aa17.58■□□□□ 0.4
NFE4-201ENST00000420058 GSTO1P78417 241 aa17.58■□□□□ 0.4
NFE4-201ENST00000420058 Q3C1V9 767 aa17.58■□□□□ 0.4
NFE4-201ENST00000420058 TEX11Q8IYF3 940 aa17.58■□□□□ 0.4
NFE4-201ENST00000420058 USP6NLQ92738 828 aa17.58■□□□□ 0.4
NFE4-201ENST00000420058 RAI14Q9P0K7 980 aa17.58■□□□□ 0.4
NFE4-201ENST00000420058 RBPJLQ9UBG7 517 aa17.58■□□□□ 0.4
NFE4-201ENST00000420058 HERC5Q9UII4 1024 aaKnown RBP17.58■□□□□ 0.4
NFE4-201ENST00000420058 PFASO15067 1338 aa17.57■□□□□ 0.4
NFE4-201ENST00000420058 CYP2B6P20813 491 aa17.57■□□□□ 0.4
NFE4-201ENST00000420058 PABPC4Q13310 644 aaKnown RBP eCLIP17.57■□□□□ 0.43e-10■■■■□ 19.6
NFE4-201ENST00000420058 GPR153Q6NV75 609 aa17.57■□□□□ 0.4
NFE4-201ENST00000420058 ARHGAP45Q92619 1136 aa17.57■□□□□ 0.4
NFE4-201ENST00000420058 PI4KBQ9UBF8 816 aa17.57■□□□□ 0.4
NFE4-201ENST00000420058 PNMA6EA0A0J9YXQ4 647 aa17.56■□□□□ 0.4
NFE4-201ENST00000420058 GNAI3P08754 354 aa17.56■□□□□ 0.4
NFE4-201ENST00000420058 COL6A1P12109 1028 aa17.56■□□□□ 0.4
NFE4-201ENST00000420058 XRCC5P13010 732 aaKnown RBP17.56■□□□□ 0.4
NFE4-201ENST00000420058 SYN1P17600 705 aa17.56■□□□□ 0.4
NFE4-201ENST00000420058 MAGEA10P43363 369 aaPredicted RBP17.56■□□□□ 0.4
NFE4-201ENST00000420058 PPP4CP60510 307 aa17.56■□□□□ 0.4
NFE4-201ENST00000420058 MTMR2Q13614 643 aa17.56■□□□□ 0.4
NFE4-201ENST00000420058 ADGRA1Q86SQ6 560 aa17.56■□□□□ 0.4
NFE4-201ENST00000420058 C11orf49Q9H6J7 331 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms