RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 SPACA3Q8IXA5 215 aa6.29□□□□□ -1.4
SEMA3A-202ENST00000420047 EMILIN2Q9BXX0 1053 aa6.29□□□□□ -1.4
SEMA3A-202ENST00000420047 TUT1Q9H6E5 874 aaKnown RBP6.29□□□□□ -1.4
SEMA3A-202ENST00000420047 PRDM7Q9NQW5 492 aa6.29□□□□□ -1.4
SEMA3A-202ENST00000420047 TOP2AP11388 1531 aaKnown RBP6.29□□□□□ -1.4
SEMA3A-202ENST00000420047 URB2Q14146 1524 aaKnown RBP6.29□□□□□ -1.4
SEMA3A-202ENST00000420047 CEP164Q9UPV0 1460 aa6.28□□□□□ -1.4
SEMA3A-202ENST00000420047 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.28□□□□□ -1.4
SEMA3A-202ENST00000420047 GLI1P08151 1106 aa6.28□□□□□ -1.4
SEMA3A-202ENST00000420047 CLCN7P51798 805 aa6.28□□□□□ -1.4
SEMA3A-202ENST00000420047 SULF2Q8IWU5 870 aa6.28□□□□□ -1.4
SEMA3A-202ENST00000420047 PRDM10Q9NQV6 1147 aa6.28□□□□□ -1.4
SEMA3A-202ENST00000420047 GPN3Q9UHW5 284 aaPredicted RBP6.28□□□□□ -1.4
SEMA3A-202ENST00000420047 C1QL4Q86Z23 238 aa6.27□□□□□ -1.41
SEMA3A-202ENST00000420047 LRRC56Q8IYG6 542 aaPredicted RBP6.27□□□□□ -1.41
SEMA3A-202ENST00000420047 LIN37Q96GY3 246 aaPredicted RBP6.27□□□□□ -1.41
SEMA3A-202ENST00000420047 WDR62O43379 1518 aa6.26□□□□□ -1.41
SEMA3A-202ENST00000420047 ARID3CA6NKF2 412 aa6.26□□□□□ -1.41
SEMA3A-202ENST00000420047 IGHA2P01877 340 aa6.26□□□□□ -1.41
SEMA3A-202ENST00000420047 NME2P22392 152 aa6.26□□□□□ -1.41
SEMA3A-202ENST00000420047 FCGRTP55899 365 aa6.26□□□□□ -1.41
SEMA3A-202ENST00000420047 NKPD1Q17RQ9 610 aa6.26□□□□□ -1.41
SEMA3A-202ENST00000420047 LILRA6Q6PI73 481 aa6.26□□□□□ -1.41
SEMA3A-202ENST00000420047 SYDE1Q6ZW31 735 aaPredicted RBP6.26□□□□□ -1.41
SEMA3A-202ENST00000420047 CCER1Q8TC90 406 aaPredicted RBP6.26□□□□□ -1.41
SEMA3A-202ENST00000420047 EPS8L3Q8TE67 593 aaKnown RBP6.26□□□□□ -1.41
SEMA3A-202ENST00000420047 ALKBH8Q96BT7 664 aaKnown RBP6.26□□□□□ -1.41
SEMA3A-202ENST00000420047 CSRNP1Q96S65 589 aa6.26□□□□□ -1.41
SEMA3A-202ENST00000420047 NIF3L1Q9GZT8 377 aa6.26□□□□□ -1.41
SEMA3A-202ENST00000420047 CACNA2D2Q9NY47 1150 aa6.26□□□□□ -1.41
SEMA3A-202ENST00000420047 PITPNM2Q9BZ72 1349 aa6.25□□□□□ -1.41
SEMA3A-202ENST00000420047 GNAT3A8MTJ3 354 aa6.25□□□□□ -1.41
SEMA3A-202ENST00000420047 ZNF865P0CJ78 1059 aaPredicted RBP6.25□□□□□ -1.41
SEMA3A-202ENST00000420047 ZNF252P-AS1Q0IIN9 211 aa6.25□□□□□ -1.41
SEMA3A-202ENST00000420047 TMEM67Q5HYA8 995 aa6.25□□□□□ -1.41
SEMA3A-202ENST00000420047 FYB2Q5VWT5 728 aa6.25□□□□□ -1.41
SEMA3A-202ENST00000420047 MAP1SQ66K74 1059 aaPredicted RBP6.25□□□□□ -1.41
SEMA3A-202ENST00000420047 CYFIP1Q7L576 1253 aa6.25□□□□□ -1.41
SEMA3A-202ENST00000420047 KIRREL1Q96J84 757 aa6.25□□□□□ -1.41
SEMA3A-202ENST00000420047 DMRTB1Q96MA1 342 aa6.25□□□□□ -1.41
SEMA3A-202ENST00000420047 RAPGEFL1Q9UHV5 662 aa6.25□□□□□ -1.41
SEMA3A-202ENST00000420047 ZNF608Q9ULD9 1512 aaPredicted RBP6.25□□□□□ -1.41
SEMA3A-202ENST00000420047 GPR182O15218 404 aa6.24□□□□□ -1.41
SEMA3A-202ENST00000420047 FANCGO15287 622 aa6.24□□□□□ -1.41
SEMA3A-202ENST00000420047 MPZL3Q6UWV2 235 aa6.24□□□□□ -1.41
SEMA3A-202ENST00000420047 LCNL1Q6ZST4 164 aa6.24□□□□□ -1.41
SEMA3A-202ENST00000420047 KCT2Q8NC54 265 aa6.24□□□□□ -1.41
SEMA3A-202ENST00000420047 TMC1Q8TDI8 760 aa6.24□□□□□ -1.41
SEMA3A-202ENST00000420047 STK35Q8TDR2 534 aa6.24□□□□□ -1.41
SEMA3A-202ENST00000420047 GPBAR1Q8TDU6 330 aa6.24□□□□□ -1.41
SEMA3A-202ENST00000420047 NLRP2Q9NX02 1062 aa6.24□□□□□ -1.41
SEMA3A-202ENST00000420047 MAPK8IP1Q9UQF2 711 aa6.24□□□□□ -1.41
SEMA3A-202ENST00000420047 CARNS1A5YM72 827 aa6.23□□□□□ -1.41
SEMA3A-202ENST00000420047 ZSCAN22P10073 491 aaPredicted RBP6.23□□□□□ -1.41
SEMA3A-202ENST00000420047 GDNFP39905 211 aa6.23□□□□□ -1.41
SEMA3A-202ENST00000420047 SERPINB4P48594 390 aa6.23□□□□□ -1.41
SEMA3A-202ENST00000420047 RING1Q06587 406 aa6.23□□□□□ -1.41
SEMA3A-202ENST00000420047 PRR23BQ6ZRT6 265 aa6.23□□□□□ -1.41
SEMA3A-202ENST00000420047 AMIGO3Q86WK7 504 aa6.23□□□□□ -1.41
SEMA3A-202ENST00000420047 CCDC82Q8N4S0 544 aa6.23□□□□□ -1.41
SEMA3A-202ENST00000420047 ACSBG1Q96GR2 724 aa6.23□□□□□ -1.41
SEMA3A-202ENST00000420047 CCDC120Q96HB5 630 aa6.23□□□□□ -1.41
SEMA3A-202ENST00000420047 FOXQ1Q9C009 403 aa6.23□□□□□ -1.41
SEMA3A-202ENST00000420047 PRDM5Q9NQX1 630 aaPredicted RBP6.23□□□□□ -1.41
SEMA3A-202ENST00000420047 USTQ9Y2C2 406 aa6.23□□□□□ -1.41
SEMA3A-202ENST00000420047 NFIBO00712 420 aa6.22□□□□□ -1.41
SEMA3A-202ENST00000420047 EOMESO95936 686 aa6.22□□□□□ -1.41
SEMA3A-202ENST00000420047 C1QTNF9P0C862 333 aa6.22□□□□□ -1.41
SEMA3A-202ENST00000420047 NTF4P34130 210 aa6.22□□□□□ -1.41
SEMA3A-202ENST00000420047 PPM1JQ5JR12 505 aa6.22□□□□□ -1.41
SEMA3A-202ENST00000420047 LCE5AQ5TCM9 118 aa6.22□□□□□ -1.41
SEMA3A-202ENST00000420047 SCARA3Q6AZY7 606 aa6.22□□□□□ -1.41
SEMA3A-202ENST00000420047 CDC37L1Q7L3B6 337 aa6.22□□□□□ -1.41
SEMA3A-202ENST00000420047 NPAS4Q8IUM7 802 aa6.22□□□□□ -1.41
SEMA3A-202ENST00000420047 FBXO15Q8NCQ5 510 aaPredicted RBP6.22□□□□□ -1.41
SEMA3A-202ENST00000420047 KRTAP4-5Q9BYR2 181 aa6.22□□□□□ -1.41
SEMA3A-202ENST00000420047 BCO2Q9BYV7 579 aa6.22□□□□□ -1.41
SEMA3A-202ENST00000420047 SAMM50Q9Y512 469 aa6.22□□□□□ -1.41
SEMA3A-202ENST00000420047 AQRO60306 1485 aaKnown RBP eCLIP6.22□□□□□ -1.41
SEMA3A-202ENST00000420047 KRT1P04264 644 aa6.21□□□□□ -1.42
SEMA3A-202ENST00000420047 ZBTB37Q5TC79 503 aa6.21□□□□□ -1.42
SEMA3A-202ENST00000420047 C22orf34Q6ZV56 151 aa6.21□□□□□ -1.42
SEMA3A-202ENST00000420047 RBCK1Q9BYM8 510 aa6.21□□□□□ -1.42
SEMA3A-202ENST00000420047 CARS2Q9HA77 564 aaKnown RBP6.21□□□□□ -1.42
SEMA3A-202ENST00000420047 PICK1Q9NRD5 415 aa6.21□□□□□ -1.42
SEMA3A-202ENST00000420047 AKAP2Q9Y2D5 859 aa6.21□□□□□ -1.42
SEMA3A-202ENST00000420047 NCANO14594 1321 aa6.21□□□□□ -1.42
SEMA3A-202ENST00000420047 RAD54L2Q9Y4B4 1467 aa6.21□□□□□ -1.42
SEMA3A-202ENST00000420047 PRRG2O14669 202 aa6.2□□□□□ -1.42
SEMA3A-202ENST00000420047 TRIM37O94972 964 aa6.2□□□□□ -1.42
SEMA3A-202ENST00000420047 TTLL10Q6ZVT0 673 aa6.2□□□□□ -1.42
SEMA3A-202ENST00000420047 NECAB3Q96P71 396 aaPredicted RBP6.2□□□□□ -1.42
SEMA3A-202ENST00000420047 CBX8Q9HC52 389 aa6.2□□□□□ -1.42
SEMA3A-202ENST00000420047 SEMA3GQ9NS98 782 aa6.2□□□□□ -1.42
SEMA3A-202ENST00000420047 C19orf73Q9NVV2 129 aa6.2□□□□□ -1.42
SEMA3A-202ENST00000420047 TOPBP1Q92547 1522 aa6.2□□□□□ -1.42
SEMA3A-202ENST00000420047 TDRD9Q8NDG6 1382 aaKnown RBP6.19□□□□□ -1.42
SEMA3A-202ENST00000420047 LRIG2O94898 1065 aa6.19□□□□□ -1.42
SEMA3A-202ENST00000420047 ZNF507Q8TCN5 953 aa6.19□□□□□ -1.42
SEMA3A-202ENST00000420047 HSPA12BQ96MM6 686 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms