RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 CDK5RAP2Q96SN8 1893 aa15.44■□□□□ 0.06
HMGN1P4-201ENST00000419500 TBC1D12O60347 775 aa15.43■□□□□ 0.06
HMGN1P4-201ENST00000419500 HLA-DOAP06340 250 aa15.43■□□□□ 0.06
HMGN1P4-201ENST00000419500 FAM43AQ8N2R8 423 aa15.43■□□□□ 0.06
HMGN1P4-201ENST00000419500 CRACR2BQ8N4Y2 399 aaPredicted RBP15.43■□□□□ 0.06
HMGN1P4-201ENST00000419500 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.43■□□□□ 0.06
HMGN1P4-201ENST00000419500 R3HDMLQ9H3Y0 253 aa15.43■□□□□ 0.06
HMGN1P4-201ENST00000419500 PI4KBQ9UBF8 816 aa15.43■□□□□ 0.06
HMGN1P4-201ENST00000419500 HERC5Q9UII4 1024 aaKnown RBP15.43■□□□□ 0.06
HMGN1P4-201ENST00000419500 PCDHB15Q9Y5E8 787 aa15.43■□□□□ 0.06
HMGN1P4-201ENST00000419500 SLURP2P0DP57 97 aa15.42■□□□□ 0.06
HMGN1P4-201ENST00000419500 PDE6AP16499 860 aa15.42■□□□□ 0.06
HMGN1P4-201ENST00000419500 PTPRAP18433 802 aa15.42■□□□□ 0.06
HMGN1P4-201ENST00000419500 EDC3Q96F86 508 aaKnown RBP15.42■□□□□ 0.06
HMGN1P4-201ENST00000419500 HAUS7Q99871 368 aa15.42■□□□□ 0.06
HMGN1P4-201ENST00000419500 ZFYVE28Q9HCC9 887 aa15.42■□□□□ 0.06
HMGN1P4-201ENST00000419500 ZCCHC17Q9NP64 241 aaKnown RBP15.42■□□□□ 0.06
HMGN1P4-201ENST00000419500 ECHDC1Q9NTX5 307 aa15.42■□□□□ 0.06
HMGN1P4-201ENST00000419500 SAP30BPQ9UHR5 308 aaKnown RBP15.42■□□□□ 0.06
HMGN1P4-201ENST00000419500 KCNH4Q9UQ05 1017 aa15.42■□□□□ 0.06
HMGN1P4-201ENST00000419500 MAGEB6P1A0A0J9YX57 407 aa15.41■□□□□ 0.06
HMGN1P4-201ENST00000419500 BTBD19C9JJ37 291 aa15.41■□□□□ 0.06
HMGN1P4-201ENST00000419500 ZBTB47Q9UFB7 747 aaPredicted RBP15.41■□□□□ 0.06
HMGN1P4-201ENST00000419500 PALD1Q9ULE6 856 aa15.41■□□□□ 0.06
HMGN1P4-201ENST00000419500 ZHX2Q9Y6X8 837 aa15.41■□□□□ 0.06
HMGN1P4-201ENST00000419500 ZNF532Q9HCE3 1301 aa15.41■□□□□ 0.06
HMGN1P4-201ENST00000419500 SIPA1L1O43166 1804 aa15.4■□□□□ 0.06
HMGN1P4-201ENST00000419500 CXCL11O14625 94 aa15.4■□□□□ 0.06
HMGN1P4-201ENST00000419500 PKN2Q16513 984 aaKnown RBP15.4■□□□□ 0.06
HMGN1P4-201ENST00000419500 SLC4A8Q2Y0W8 1093 aa15.4■□□□□ 0.06
HMGN1P4-201ENST00000419500 ERO1AQ96HE7 468 aa15.4■□□□□ 0.06
HMGN1P4-201ENST00000419500 CRNKL1Q9BZJ0 848 aaKnown RBP15.4■□□□□ 0.06
HMGN1P4-201ENST00000419500 ATAD5Q96QE3 1844 aa15.4■□□□□ 0.06
HMGN1P4-201ENST00000419500 TRIM75PA6NK02 468 aa15.39■□□□□ 0.05
HMGN1P4-201ENST00000419500 CCDC85CA6NKD9 419 aa15.39■□□□□ 0.05
HMGN1P4-201ENST00000419500 SP3Q02447 781 aa15.39■□□□□ 0.05
HMGN1P4-201ENST00000419500 AAMPQ13685 434 aa15.39■□□□□ 0.05
HMGN1P4-201ENST00000419500 ZSCAN25Q6NSZ9 544 aa15.39■□□□□ 0.05
HMGN1P4-201ENST00000419500 ANKRD23Q86SG2 305 aa15.39■□□□□ 0.05
HMGN1P4-201ENST00000419500 RIOK1Q9BRS2 568 aaKnown RBP15.39■□□□□ 0.05
HMGN1P4-201ENST00000419500 NAV1Q8NEY1 1877 aa15.39■□□□□ 0.05
HMGN1P4-201ENST00000419500 DDX60LQ5H9U9 1706 aaKnown RBP15.38■□□□□ 0.05
HMGN1P4-201ENST00000419500 A0A0G2JLL6 359 aaPredicted RBP15.38■□□□□ 0.05
HMGN1P4-201ENST00000419500 TCRBV5S4A2TA0A5A2 114 aa15.38■□□□□ 0.05
HMGN1P4-201ENST00000419500 PDHXO00330 501 aa15.38■□□□□ 0.05
HMGN1P4-201ENST00000419500 ADD2P35612 726 aa15.38■□□□□ 0.05
HMGN1P4-201ENST00000419500 CAP2P40123 477 aa15.38■□□□□ 0.05
HMGN1P4-201ENST00000419500 GADL1Q6ZQY3 521 aa15.38■□□□□ 0.05
HMGN1P4-201ENST00000419500 FASTKD5Q7L8L6 764 aaKnown RBP15.38■□□□□ 0.05
HMGN1P4-201ENST00000419500 PRRT2Q7Z6L0 340 aaPredicted RBP15.38■□□□□ 0.05
HMGN1P4-201ENST00000419500 FOXP4Q8IVH2 680 aaPredicted RBP15.38■□□□□ 0.05
HMGN1P4-201ENST00000419500 CD99L2Q8TCZ2 262 aa15.38■□□□□ 0.05
HMGN1P4-201ENST00000419500 TBC1D2Q9BYX2 928 aa15.38■□□□□ 0.05
HMGN1P4-201ENST00000419500 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.38■□□□□ 0.05
HMGN1P4-201ENST00000419500 AFG3L2Q9Y4W6 797 aa15.38■□□□□ 0.05
HMGN1P4-201ENST00000419500 MYH1P12882 1939 aa15.38■□□□□ 0.05
HMGN1P4-201ENST00000419500 HTTP42858 3142 aa15.37■□□□□ 0.05
HMGN1P4-201ENST00000419500 TLR2O60603 784 aa15.37■□□□□ 0.05
HMGN1P4-201ENST00000419500 TSHZ3Q63HK5 1081 aa15.37■□□□□ 0.05
HMGN1P4-201ENST00000419500 TTC6Q86TZ1 520 aa15.37■□□□□ 0.05
HMGN1P4-201ENST00000419500 CCDC84Q86UT8 332 aaPredicted RBP15.37■□□□□ 0.05
HMGN1P4-201ENST00000419500 PARK7Q99497 189 aaKnown RBP15.37■□□□□ 0.05
HMGN1P4-201ENST00000419500 AS3MTQ9HBK9 375 aa15.37■□□□□ 0.05
HMGN1P4-201ENST00000419500 TRIM17Q9Y577 477 aa15.37■□□□□ 0.05
HMGN1P4-201ENST00000419500 PHIPQ8WWQ0 1821 aa15.37■□□□□ 0.05
HMGN1P4-201ENST00000419500 MYH7P12883 1935 aa15.37■□□□□ 0.05
HMGN1P4-201ENST00000419500 USP17L5A8MUK1 530 aa15.36■□□□□ 0.05
HMGN1P4-201ENST00000419500 ERC2O15083 957 aa15.36■□□□□ 0.05
HMGN1P4-201ENST00000419500 MBD4O95243 580 aa15.36■□□□□ 0.05
HMGN1P4-201ENST00000419500 POLR3DP05423 398 aaPredicted RBP15.36■□□□□ 0.05
HMGN1P4-201ENST00000419500 ASNSP08243 561 aa15.36■□□□□ 0.05
HMGN1P4-201ENST00000419500 ARHGEF6Q15052 776 aa15.36■□□□□ 0.05
HMGN1P4-201ENST00000419500 METTL16Q86W50 562 aaKnown RBP15.36■□□□□ 0.05
HMGN1P4-201ENST00000419500 LCORLQ8N3X6 602 aa15.36■□□□□ 0.05
HMGN1P4-201ENST00000419500 GCC1Q96CN9 775 aa15.36■□□□□ 0.05
HMGN1P4-201ENST00000419500 EHD4Q9H223 541 aa15.36■□□□□ 0.05
HMGN1P4-201ENST00000419500 DNAJC18Q9H819 358 aa15.36■□□□□ 0.05
HMGN1P4-201ENST00000419500 ARMT1Q9H993 441 aa15.36■□□□□ 0.05
HMGN1P4-201ENST00000419500 SERPINB13Q9UIV8 391 aa15.36■□□□□ 0.05
HMGN1P4-201ENST00000419500 TTC41PQ6P2S7 1318 aa15.36■□□□□ 0.05
HMGN1P4-201ENST00000419500 GDF11O95390 407 aa15.35■□□□□ 0.05
HMGN1P4-201ENST00000419500 HDAC1Q13547 482 aaPredicted RBP15.35■□□□□ 0.05
HMGN1P4-201ENST00000419500 MOGSQ13724 837 aa15.35■□□□□ 0.05
HMGN1P4-201ENST00000419500 KIF22Q14807 665 aa15.35■□□□□ 0.05
HMGN1P4-201ENST00000419500 UBE3CQ15386 1083 aa15.35■□□□□ 0.05
HMGN1P4-201ENST00000419500 FBXO46Q6PJ61 603 aaPredicted RBP15.35■□□□□ 0.05
HMGN1P4-201ENST00000419500 OTOP1Q7RTM1 612 aa15.35■□□□□ 0.05
HMGN1P4-201ENST00000419500 ZNF280CQ8ND82 737 aa15.35■□□□□ 0.05
HMGN1P4-201ENST00000419500 SDR42E1Q8WUS8 393 aa15.35■□□□□ 0.05
HMGN1P4-201ENST00000419500 DDRGK1Q96HY6 314 aa15.35■□□□□ 0.05
HMGN1P4-201ENST00000419500 EFCC1Q9HA90 598 aa15.35■□□□□ 0.05
HMGN1P4-201ENST00000419500 MCM9Q9NXL9 1143 aa15.35■□□□□ 0.05
HMGN1P4-201ENST00000419500 HPS5Q9UPZ3 1129 aa15.35■□□□□ 0.05
HMGN1P4-201ENST00000419500 PTPRFP10586 1907 aa15.35■□□□□ 0.05
HMGN1P4-201ENST00000419500 MX1P20591 662 aa15.34■□□□□ 0.05
HMGN1P4-201ENST00000419500 SPP2Q13103 211 aa15.34■□□□□ 0.05
HMGN1P4-201ENST00000419500 RRP1BQ14684 758 aaKnown RBP15.34■□□□□ 0.05
HMGN1P4-201ENST00000419500 ANKRD45Q5TZF3 282 aa15.34■□□□□ 0.05
HMGN1P4-201ENST00000419500 AMOTL1Q8IY63 956 aa15.34■□□□□ 0.05
HMGN1P4-201ENST00000419500 KBTBD3Q8NAB2 608 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms