RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 SAP30BPQ9UHR5 308 aaKnown RBP15.11■□□□□ 0.01
LINC00642-201ENST00000419459 ASTN2O75129 1339 aaPredicted RBP15.11■□□□□ 0.01
LINC00642-201ENST00000419459 LAMA4Q16363 1823 aa15.11■□□□□ 0.01
LINC00642-201ENST00000419459 SLC27A2O14975 620 aa15.1■□□□□ 0.01
LINC00642-201ENST00000419459 DLGAP5Q15398 846 aa15.1■□□□□ 0.01
LINC00642-201ENST00000419459 BRD1O95696 1058 aa15.1■□□□□ 0.01
LINC00642-201ENST00000419459 GNAT2P19087 354 aa15.1■□□□□ 0.01
LINC00642-201ENST00000419459 RPS12P25398 132 aaKnown RBP15.1■□□□□ 0.01
LINC00642-201ENST00000419459 HDLBPQ00341 1268 aaKnown RBP15.1■□□□□ 0.01
LINC00642-201ENST00000419459 ADCK5Q3MIX3 580 aa15.1■□□□□ 0.01
LINC00642-201ENST00000419459 TRPM4Q8TD43 1214 aa15.1■□□□□ 0.01
LINC00642-201ENST00000419459 INCENPQ9NQS7 918 aa15.1■□□□□ 0.01
LINC00642-201ENST00000419459 MCM9Q9NXL9 1143 aa15.1■□□□□ 0.01
LINC00642-201ENST00000419459 GPRC5DQ9NZD1 345 aa15.1■□□□□ 0.01
LINC00642-201ENST00000419459 FLT1P17948 1338 aa15.1■□□□□ 0.01
LINC00642-201ENST00000419459 PCNTO95613 3336 aa15.09■□□□□ 0.01
LINC00642-201ENST00000419459 MINDY4BA8MYZ0 360 aa15.09■□□□□ 0.01
LINC00642-201ENST00000419459 USP17L12C9JPN9 530 aa15.09■□□□□ 0.01
LINC00642-201ENST00000419459 USP17L21D6R901 530 aa15.09■□□□□ 0.01
LINC00642-201ENST00000419459 PTMAP06454 111 aaKnown RBP15.09■□□□□ 0.01
LINC00642-201ENST00000419459 LAMB1P07942 1786 aa15.09■□□□□ 0.01
LINC00642-201ENST00000419459 CYP2D6P10635 497 aa15.09■□□□□ 0.01
LINC00642-201ENST00000419459 DDX60LQ5H9U9 1706 aaKnown RBP15.09■□□□□ 0.01
LINC00642-201ENST00000419459 ZFPM1Q8IX07 1006 aa15.09■□□□□ 0.01
LINC00642-201ENST00000419459 DPF2Q92785 391 aa15.09■□□□□ 0.01
LINC00642-201ENST00000419459 NBPF3Q9H094 633 aa15.09■□□□□ 0.01
LINC00642-201ENST00000419459 MKRN1Q9UHC7 482 aaKnown RBP15.09■□□□□ 0.01
LINC00642-201ENST00000419459 SNX14Q9Y5W7 946 aa15.09■□□□□ 0.01
LINC00642-201ENST00000419459 SLURP2P0DP57 97 aa15.09■□□□□ 0.01
LINC00642-201ENST00000419459 CTDSPL2Q05D32 466 aa15.09■□□□□ 0.01
LINC00642-201ENST00000419459 CUL4AQ13619 759 aa15.09■□□□□ 0.01
LINC00642-201ENST00000419459 TMED8Q6PL24 325 aaPredicted RBP15.09■□□□□ 0.01
LINC00642-201ENST00000419459 PIBF1Q8WXW3 757 aa15.09■□□□□ 0.01
LINC00642-201ENST00000419459 MRIQ9BWK5 157 aa15.09■□□□□ 0.01
LINC00642-201ENST00000419459 NACAP1Q9BZK3 213 aa15.09■□□□□ 0.01
LINC00642-201ENST00000419459 VEZTQ9HBM0 779 aa15.09■□□□□ 0.01
LINC00642-201ENST00000419459 U3KPZ7 1027 aaPredicted RBP15.09■□□□□ 0.01
LINC00642-201ENST00000419459 POLR2AP24928 1970 aaKnown RBP15.08■□□□□ 0.01
LINC00642-201ENST00000419459 IGSF3O75054 1194 aa15.08■□□□□ 0
LINC00642-201ENST00000419459 CPA1P15085 419 aa15.08■□□□□ 0
LINC00642-201ENST00000419459 PLCG2P16885 1265 aa15.08■□□□□ 0
LINC00642-201ENST00000419459 ZNF280AP59817 542 aaPredicted RBP15.08■□□□□ 0
LINC00642-201ENST00000419459 DMTNQ08495 405 aa15.08■□□□□ 0
LINC00642-201ENST00000419459 CTR9Q6PD62 1173 aa15.08■□□□□ 0
LINC00642-201ENST00000419459 UPF3BQ9BZI7 483 aaKnown RBP15.08■□□□□ 0
LINC00642-201ENST00000419459 TCP10L2B9ZVM9 353 aa15.07■□□□□ 0
LINC00642-201ENST00000419459 MCCP23508 829 aa15.07■□□□□ 0
LINC00642-201ENST00000419459 ANAPC15P60006 121 aa15.07■□□□□ 0
LINC00642-201ENST00000419459 KIF4BQ2VIQ3 1234 aa15.07■□□□□ 0
LINC00642-201ENST00000419459 DPY19L2Q6NUT2 758 aa15.07■□□□□ 0
LINC00642-201ENST00000419459 STOX1Q6ZVD7 989 aa15.07■□□□□ 0
LINC00642-201ENST00000419459 TBC1D10CQ8IV04 446 aa15.07■□□□□ 0
LINC00642-201ENST00000419459 NKX2-3Q8TAU0 364 aa15.07■□□□□ 0
LINC00642-201ENST00000419459 IL17RAQ96F46 866 aa15.07■□□□□ 0
LINC00642-201ENST00000419459 ATP8A2Q9NTI2 1148 aa15.07■□□□□ 0
LINC00642-201ENST00000419459 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.07■□□□□ 0
LINC00642-201ENST00000419459 GLTPD2A6NH11 291 aa15.07■□□□□ 0
LINC00642-201ENST00000419459 ZNF213O14771 459 aa15.07■□□□□ 0
LINC00642-201ENST00000419459 LETM1O95202 739 aaPredicted RBP15.07■□□□□ 0
LINC00642-201ENST00000419459 PLCD1P51178 756 aa15.07■□□□□ 0
LINC00642-201ENST00000419459 IMMTQ16891 758 aaKnown RBP15.07■□□□□ 0
LINC00642-201ENST00000419459 CDAN1Q8IWY9 1227 aa15.07■□□□□ 0
LINC00642-201ENST00000419459 FAM198AQ9UFP1 575 aa15.07■□□□□ 0
LINC00642-201ENST00000419459 H7C1D1 291 aa15.06■□□□□ 0
LINC00642-201ENST00000419459 TACC3Q9Y6A5 838 aa15.06■□□□□ 0
LINC00642-201ENST00000419459 EPB41L2O43491 1005 aaKnown RBP15.05■□□□□ 0
LINC00642-201ENST00000419459 ZKSCAN1P17029 563 aaPredicted RBP15.05■□□□□ 0
LINC00642-201ENST00000419459 HIRAP54198 1017 aaPredicted RBP15.05■□□□□ 0
LINC00642-201ENST00000419459 PPARAQ07869 468 aa15.05■□□□□ 0
LINC00642-201ENST00000419459 RNF20Q5VTR2 975 aa15.05■□□□□ 0
LINC00642-201ENST00000419459 ZNF526Q8TF50 670 aaPredicted RBP15.05■□□□□ 0
LINC00642-201ENST00000419459 ZBED3Q96IU2 234 aaPredicted RBP15.05■□□□□ 0
LINC00642-201ENST00000419459 TMX3Q96JJ7 454 aa15.05■□□□□ 0
LINC00642-201ENST00000419459 TCEANC2Q96MN5 208 aa15.05■□□□□ 0
LINC00642-201ENST00000419459 ZNF70Q9UC06 446 aaPredicted RBP15.05■□□□□ 0
LINC00642-201ENST00000419459 PRDM1O75626 825 aa15.05■□□□□ -0
LINC00642-201ENST00000419459 LMOD1P29536 600 aaPredicted RBP15.05■□□□□ -0
LINC00642-201ENST00000419459 ALX1Q15699 326 aa15.05■□□□□ -0
LINC00642-201ENST00000419459 SPDYE2Q495Y8 402 aa15.05■□□□□ -0
LINC00642-201ENST00000419459 CERS3Q8IU89 383 aa15.05■□□□□ -0
LINC00642-201ENST00000419459 MTMR14Q8NCE2 650 aa15.05■□□□□ -0
LINC00642-201ENST00000419459 SLC44A5Q8NCS7 719 aa15.05■□□□□ -0
LINC00642-201ENST00000419459 DYNLL2Q96FJ2 89 aa15.05■□□□□ -0
LINC00642-201ENST00000419459 JAKMIP1Q96N16 626 aaKnown RBP15.05■□□□□ -0
LINC00642-201ENST00000419459 GTPBP4Q9BZE4 634 aaKnown RBP15.05■□□□□ -0
LINC00642-201ENST00000419459 OSBPL5Q9H0X9 879 aaPredicted RBP15.05■□□□□ -0
LINC00642-201ENST00000419459 CTNNA3Q9UI47 895 aa15.05■□□□□ -0
LINC00642-201ENST00000419459 SIPA1L1O43166 1804 aa15.04■□□□□ -0
LINC00642-201ENST00000419459 ZMYM6O95789 1325 aa15.04■□□□□ -0
LINC00642-201ENST00000419459 NEDD4P46934 1319 aa15.04■□□□□ -0
LINC00642-201ENST00000419459 DDTLA6NHG4 134 aaPredicted RBP15.04■□□□□ -0
LINC00642-201ENST00000419459 E7EWF7 191 aa15.04■□□□□ -0
LINC00642-201ENST00000419459 MYO1BO43795 1136 aa15.04■□□□□ -0
LINC00642-201ENST00000419459 CASTP20810 708 aaKnown RBP15.04■□□□□ -0
LINC00642-201ENST00000419459 CHST3Q7LGC8 479 aa15.04■□□□□ -0
LINC00642-201ENST00000419459 ZSCAN29Q8IWY8 852 aaPredicted RBP15.04■□□□□ -0
LINC00642-201ENST00000419459 SPTLC3Q9NUV7 552 aa15.04■□□□□ -0
LINC00642-201ENST00000419459 RPAP1Q9BWH6 1393 aaPredicted RBP15.04■□□□□ -0
LINC00642-201ENST00000419459 DCAF8L1A6NGE4 600 aa15.04■□□□□ -0
LINC00642-201ENST00000419459 FAM196BA6NMK8 535 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms