RNA–Protein interactions for RNA: ENST00000419300.3

LINC00963-202, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 9,557 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-202ENST00000419300 BICD1Q96G01 975 aa11.21□□□□□ -0.62
LINC00963-202ENST00000419300 ANGEL1Q9UNK9 670 aaKnown RBP11.21□□□□□ -0.62
LINC00963-202ENST00000419300 SLC9C1Q4G0N8 1177 aa11.21□□□□□ -0.62
LINC00963-202ENST00000419300 P3H4Q92791 437 aa11.21□□□□□ -0.62
LINC00963-202ENST00000419300 IFIH1Q9BYX4 1025 aaKnown RBP11.21□□□□□ -0.62
LINC00963-202ENST00000419300 TRMT112Q9UI30 125 aaKnown RBP11.21□□□□□ -0.62
LINC00963-202ENST00000419300 PSDA5PKW4 1024 aaPredicted RBP11.21□□□□□ -0.62
LINC00963-202ENST00000419300 TARBP1Q13395 1621 aaKnown RBP11.21□□□□□ -0.62
LINC00963-202ENST00000419300 YTHDC2Q9H6S0 1430 aaKnown RBP11.21□□□□□ -0.62
LINC00963-202ENST00000419300 NAPAP54920 295 aa11.2□□□□□ -0.62
LINC00963-202ENST00000419300 KARSQ15046 597 aaKnown RBP11.2□□□□□ -0.62
LINC00963-202ENST00000419300 EFCC1Q9HA90 598 aa11.2□□□□□ -0.62
LINC00963-202ENST00000419300 FAN1Q9Y2M0 1017 aa11.2□□□□□ -0.62
LINC00963-202ENST00000419300 ZBTB17Q13105 803 aa11.2□□□□□ -0.62
LINC00963-202ENST00000419300 CCDC65Q8IXS2 484 aa11.2□□□□□ -0.62
LINC00963-202ENST00000419300 DHX58Q96C10 678 aa11.2□□□□□ -0.62
LINC00963-202ENST00000419300 GOLGA4Q13439 2230 aaKnown RBP11.2□□□□□ -0.62
LINC00963-202ENST00000419300 PPLO60437 1756 aa11.2□□□□□ -0.62
LINC00963-202ENST00000419300 VIMP08670 466 aaKnown RBP11.2□□□□□ -0.62
LINC00963-202ENST00000419300 GBP5Q96PP8 586 aa11.2□□□□□ -0.62
LINC00963-202ENST00000419300 CYB5RLQ6IPT4 315 aa11.2□□□□□ -0.62
LINC00963-202ENST00000419300 HEATR3Q7Z4Q2 680 aa11.2□□□□□ -0.62
LINC00963-202ENST00000419300 MAIP1Q8WWC4 291 aa11.2□□□□□ -0.62
LINC00963-202ENST00000419300 MAK16Q9BXY0 300 aaKnown RBP11.2□□□□□ -0.62
LINC00963-202ENST00000419300 ODF2LQ9ULJ1 636 aa11.2□□□□□ -0.62
LINC00963-202ENST00000419300 INF2Q27J81 1249 aa11.2□□□□□ -0.62
LINC00963-202ENST00000419300 GLI2P10070 1586 aa11.2□□□□□ -0.62
LINC00963-202ENST00000419300 SEPT2Q15019 361 aa11.2□□□□□ -0.62
LINC00963-202ENST00000419300 SNX16P57768 344 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 SLMAPQ14BN4 828 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 KRT79Q5XKE5 535 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 HAUS3Q68CZ6 603 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 SV2BQ7L1I2 683 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 CEP120Q8N960 986 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 LINS1Q8NG48 757 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 VCX3AQ9NNX9 186 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 CAPS2Q9BXY5 557 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 SPDYE3A6NKU9 549 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 CETN3O15182 167 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 FAM13AO94988 1023 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 HAND2P61296 217 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 LRRC8AQ8IWT6 810 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 SBNO1A3KN83 1393 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 STK10O94804 968 aaKnown RBP11.19□□□□□ -0.62
LINC00963-202ENST00000419300 KCNK9Q9NPC2 374 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 SRGAP1Q7Z6B7 1085 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 EXOC4Q96A65 974 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 CNOT10Q9H9A5 744 aaKnown RBP11.19□□□□□ -0.62
LINC00963-202ENST00000419300 ANKRD12Q6UB98 2062 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 BRD1O95696 1058 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 NOC4LQ9BVI4 516 aaKnown RBP11.19□□□□□ -0.62
LINC00963-202ENST00000419300 MMRN2Q9H8L6 949 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 RBM6P78332 1123 aaKnown RBP11.19□□□□□ -0.62
LINC00963-202ENST00000419300 ATP2B3Q16720 1220 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 SLFNL1Q499Z3 407 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 NBPF14Q5TI25 921 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 PHLDB3Q6NSJ2 640 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 SUDS3Q9H7L9 328 aaPredicted RBP11.19□□□□□ -0.62
LINC00963-202ENST00000419300 LIN9Q5TKA1 542 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 COMMD10Q9Y6G5 202 aa11.19□□□□□ -0.62
LINC00963-202ENST00000419300 CDK12Q9NYV4 1490 aaPredicted RBP11.18□□□□□ -0.62
LINC00963-202ENST00000419300 CCDC63Q8NA47 563 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 RUBCNQ92622 972 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 TESK2Q96S53 571 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 ASXL2Q76L83 1435 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 E7EVH7 732 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 CCT6AP40227 531 aaKnown RBP11.18□□□□□ -0.62
LINC00963-202ENST00000419300 CABS1Q96KC9 395 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 NUF2Q9BZD4 464 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 ZNF804AQ7Z570 1209 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 RAB11FIP4Q86YS3 637 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 IFNL2Q8IZJ0 200 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 DDX54Q8TDD1 881 aaKnown RBP11.18□□□□□ -0.62
LINC00963-202ENST00000419300 SGSM2O43147 1006 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 HOMER3Q9NSC5 361 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 SLC27A2O14975 620 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 ATP2A3Q93084 1043 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 HAUS2Q9NVX0 235 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 MRVI1Q9Y6F6 885 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 B4DLN1 442 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 STX10O60499 249 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 MRPL12P52815 198 aaKnown RBP11.18□□□□□ -0.62
LINC00963-202ENST00000419300 LGSNQ5TDP6 509 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 SMC1BQ8NDV3 1235 aa11.18□□□□□ -0.62
LINC00963-202ENST00000419300 RLBP1P12271 317 aa11.17□□□□□ -0.62
LINC00963-202ENST00000419300 SPATS2LQ9NUQ6 558 aaKnown RBP11.17□□□□□ -0.62
LINC00963-202ENST00000419300 ABCC4O15439 1325 aa11.17□□□□□ -0.62
LINC00963-202ENST00000419300 MPRIPQ6WCQ1 1025 aa11.17□□□□□ -0.62
LINC00963-202ENST00000419300 CCDC82Q8N4S0 544 aa11.17□□□□□ -0.62
LINC00963-202ENST00000419300 HIP1RO75146 1068 aa11.17□□□□□ -0.62
LINC00963-202ENST00000419300 MAN1A1P33908 653 aa11.17□□□□□ -0.62
LINC00963-202ENST00000419300 PHBP35232 272 aa11.17□□□□□ -0.62
LINC00963-202ENST00000419300 MUM1Q2TAK8 710 aa11.17□□□□□ -0.62
LINC00963-202ENST00000419300 AKAP4Q5JQC9 854 aa11.17□□□□□ -0.62
LINC00963-202ENST00000419300 MBD5Q9P267 1494 aa11.17□□□□□ -0.62
LINC00963-202ENST00000419300 ABCA8O94911 1581 aa11.17□□□□□ -0.62
LINC00963-202ENST00000419300 GOLGA8QA0A0J9YX86 632 aa11.17□□□□□ -0.62
LINC00963-202ENST00000419300 GOLGA8OA6NCC3 632 aa11.17□□□□□ -0.62
LINC00963-202ENST00000419300 GOLGA8NF8WBI6 632 aa11.17□□□□□ -0.62
LINC00963-202ENST00000419300 EEF2P13639 858 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms