RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 CLTCQ00610 1675 aaKnown RBP8.33□□□□□ -1.08
VPS45-203ENST00000419023 ITSN2Q9NZM3 1697 aa8.33□□□□□ -1.08
VPS45-203ENST00000419023 CCNB3Q8WWL7 1395 aa8.33□□□□□ -1.08
VPS45-203ENST00000419023 ARHGAP35Q9NRY4 1499 aa8.32□□□□□ -1.08
VPS45-203ENST00000419023 WASHC2CQ9Y4E1 1318 aa8.32□□□□□ -1.08
VPS45-203ENST00000419023 KIF3BO15066 747 aa8.32□□□□□ -1.08
VPS45-203ENST00000419023 IGHA1P01876 353 aa8.32□□□□□ -1.08
VPS45-203ENST00000419023 GSTP1P09211 210 aaKnown RBP8.32□□□□□ -1.08
VPS45-203ENST00000419023 NME2P22392 152 aa8.32□□□□□ -1.08
VPS45-203ENST00000419023 ARNTP27540 789 aa8.32□□□□□ -1.08
VPS45-203ENST00000419023 DOC2BQ14184 412 aa8.32□□□□□ -1.08
VPS45-203ENST00000419023 MRPL58Q14197 206 aaKnown RBP8.32□□□□□ -1.08
VPS45-203ENST00000419023 PDE3AQ14432 1141 aa8.32□□□□□ -1.08
VPS45-203ENST00000419023 TAF1CQ15572 869 aaPredicted RBP8.32□□□□□ -1.08
VPS45-203ENST00000419023 CCDC85BQ15834 202 aaPredicted RBP8.32□□□□□ -1.08
VPS45-203ENST00000419023 NUTM2GQ5VZR2 741 aa8.32□□□□□ -1.08
VPS45-203ENST00000419023 Q6ZS46 218 aa8.32□□□□□ -1.08
VPS45-203ENST00000419023 SV2BQ7L1I2 683 aa8.32□□□□□ -1.08
VPS45-203ENST00000419023 UBL7Q96S82 380 aaPredicted RBP8.32□□□□□ -1.08
VPS45-203ENST00000419023 TMPRSS13Q9BYE2 586 aa8.32□□□□□ -1.08
VPS45-203ENST00000419023 CBX8Q9HC52 389 aa8.32□□□□□ -1.08
VPS45-203ENST00000419023 ATP7AQ04656 1500 aa8.32□□□□□ -1.08
VPS45-203ENST00000419023 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.32□□□□□ -1.08
VPS45-203ENST00000419023 KIAA1107Q9UPP5 1409 aa8.31□□□□□ -1.08
VPS45-203ENST00000419023 FAM135AQ9P2D6 1515 aa8.31□□□□□ -1.08
VPS45-203ENST00000419023 MEGF11A6BM72 1044 aa8.31□□□□□ -1.08
VPS45-203ENST00000419023 FDX2Q6P4F2 183 aa8.31□□□□□ -1.08
VPS45-203ENST00000419023 PDZD3Q86UT5 571 aa8.31□□□□□ -1.08
VPS45-203ENST00000419023 KCNB2Q92953 911 aa8.31□□□□□ -1.08
VPS45-203ENST00000419023 TP53INP1Q96A56 240 aa8.31□□□□□ -1.08
VPS45-203ENST00000419023 SSBP4Q9BWG4 385 aaPredicted RBP8.31□□□□□ -1.08
VPS45-203ENST00000419023 CCDC86Q9H6F5 360 aaKnown RBP8.31□□□□□ -1.08
VPS45-203ENST00000419023 TPSG1Q9NRR2 321 aa8.31□□□□□ -1.08
VPS45-203ENST00000419023 NPHP4O75161 1426 aaPredicted RBP8.3□□□□□ -1.08
VPS45-203ENST00000419023 SYCP2Q9BX26 1530 aa8.3□□□□□ -1.08
VPS45-203ENST00000419023 BMP6P22004 513 aa8.3□□□□□ -1.08
VPS45-203ENST00000419023 HP1BP3Q5SSJ5 553 aaPredicted RBP8.3□□□□□ -1.08
VPS45-203ENST00000419023 C12orf50Q8NA57 414 aaPredicted RBP8.3□□□□□ -1.08
VPS45-203ENST00000419023 GRIN3AQ8TCU5 1115 aa8.3□□□□□ -1.08
VPS45-203ENST00000419023 EMILIN2Q9BXX0 1053 aa8.3□□□□□ -1.08
VPS45-203ENST00000419023 CEP41Q9BYV8 373 aa8.3□□□□□ -1.08
VPS45-203ENST00000419023 CYP4F12Q9HCS2 524 aa8.3□□□□□ -1.08
VPS45-203ENST00000419023 RAD18Q9NS91 495 aa8.3□□□□□ -1.08
VPS45-203ENST00000419023 SAMM50Q9Y512 469 aa8.3□□□□□ -1.08
VPS45-203ENST00000419023 USP31Q70CQ4 1352 aa8.3□□□□□ -1.08
VPS45-203ENST00000419023 CASKIN1Q8WXD9 1431 aa8.29□□□□□ -1.08
VPS45-203ENST00000419023 DNMT1P26358 1616 aaKnown RBP8.29□□□□□ -1.08
VPS45-203ENST00000419023 LIG1P18858 919 aa8.29□□□□□ -1.08
VPS45-203ENST00000419023 ST13P50502 369 aaKnown RBP8.29□□□□□ -1.08
VPS45-203ENST00000419023 MAP3K11Q16584 847 aa8.29□□□□□ -1.08
VPS45-203ENST00000419023 RASIP1Q5U651 963 aa8.29□□□□□ -1.08
VPS45-203ENST00000419023 PCNX4Q63HM2 1172 aa8.29□□□□□ -1.08
VPS45-203ENST00000419023 MAP1SQ66K74 1059 aaPredicted RBP8.29□□□□□ -1.08
VPS45-203ENST00000419023 ANKRD34AQ69YU3 496 aa8.29□□□□□ -1.08
VPS45-203ENST00000419023 DZIP1LQ8IYY4 767 aaKnown RBP8.29□□□□□ -1.08
VPS45-203ENST00000419023 MTUS2Q5JR59 1369 aa8.28□□□□□ -1.08
VPS45-203ENST00000419023 DHX29Q7Z478 1369 aaKnown RBP8.28□□□□□ -1.08
VPS45-203ENST00000419023 SART1O43290 800 aaKnown RBP8.28□□□□□ -1.08
VPS45-203ENST00000419023 DRD2P14416 443 aa8.28□□□□□ -1.08
VPS45-203ENST00000419023 PREPP48147 710 aa8.28□□□□□ -1.08
VPS45-203ENST00000419023 AKAP4Q5JQC9 854 aa8.28□□□□□ -1.08
VPS45-203ENST00000419023 SMG8Q8ND04 991 aaKnown RBP8.28□□□□□ -1.08
VPS45-203ENST00000419023 WDR89Q96FK6 387 aaPredicted RBP8.28□□□□□ -1.08
VPS45-203ENST00000419023 WDR18Q9BV38 432 aa8.28□□□□□ -1.08
VPS45-203ENST00000419023 SUGCTQ9HAC7 445 aa8.28□□□□□ -1.08
VPS45-203ENST00000419023 GPATCH8Q9UKJ3 1502 aaKnown RBP8.28□□□□□ -1.08
VPS45-203ENST00000419023 MIA2Q96PC5 1412 aa8.28□□□□□ -1.08
VPS45-203ENST00000419023 NLRP1Q9C000 1473 aa8.27□□□□□ -1.09
VPS45-203ENST00000419023 ZNF862O60290 1169 aa8.27□□□□□ -1.09
VPS45-203ENST00000419023 AOC2O75106 756 aa8.27□□□□□ -1.09
VPS45-203ENST00000419023 ZNF252P-AS1Q0IIN9 211 aa8.27□□□□□ -1.09
VPS45-203ENST00000419023 TTBK2Q6IQ55 1244 aa8.27□□□□□ -1.09
VPS45-203ENST00000419023 MPRIPQ6WCQ1 1025 aa8.27□□□□□ -1.09
VPS45-203ENST00000419023 KRT82Q9NSB4 513 aa8.27□□□□□ -1.09
VPS45-203ENST00000419023 EID1Q9Y6B2 187 aa8.27□□□□□ -1.09
VPS45-203ENST00000419023 UGGT1Q9NYU2 1555 aa8.27□□□□□ -1.09
VPS45-203ENST00000419023 POLR1AO95602 1720 aaPredicted RBP8.26□□□□□ -1.09
VPS45-203ENST00000419023 UNCXA6NJT0 531 aa8.26□□□□□ -1.09
VPS45-203ENST00000419023 TIAF1O95411 115 aa8.26□□□□□ -1.09
VPS45-203ENST00000419023 TSPY4P0CV99 314 aa8.26□□□□□ -1.09
VPS45-203ENST00000419023 TSPY10P0CW01 314 aa8.26□□□□□ -1.09
VPS45-203ENST00000419023 ADH5P11766 374 aa8.26□□□□□ -1.09
VPS45-203ENST00000419023 SOX4Q06945 474 aaPredicted RBP8.26□□□□□ -1.09
VPS45-203ENST00000419023 LRRC14Q15048 493 aa8.26□□□□□ -1.09
VPS45-203ENST00000419023 LLGL2Q6P1M3 1020 aa8.26□□□□□ -1.09
VPS45-203ENST00000419023 TMEM87AQ8NBN3 555 aa8.26□□□□□ -1.09
VPS45-203ENST00000419023 UTP4Q969X6 686 aaKnown RBP8.26□□□□□ -1.09
VPS45-203ENST00000419023 FAM46AQ96IP4 442 aaKnown RBP8.26□□□□□ -1.09
VPS45-203ENST00000419023 NOC4LQ9BVI4 516 aaKnown RBP8.26□□□□□ -1.09
VPS45-203ENST00000419023 PLXNC1O60486 1568 aa8.26□□□□□ -1.09
VPS45-203ENST00000419023 CDC42BPAQ5VT25 1732 aa8.26□□□□□ -1.09
VPS45-203ENST00000419023 PZPP20742 1482 aa8.26□□□□□ -1.09
VPS45-203ENST00000419023 ADGBQ8N7X0 1667 aa8.25□□□□□ -1.09
VPS45-203ENST00000419023 F6X3S4 739 aa8.25□□□□□ -1.09
VPS45-203ENST00000419023 GAS2O43903 313 aaKnown RBP8.25□□□□□ -1.09
VPS45-203ENST00000419023 LIG3P49916 1009 aa8.25□□□□□ -1.09
VPS45-203ENST00000419023 TSNAXIP1Q2TAA8 658 aa8.25□□□□□ -1.09
VPS45-203ENST00000419023 ARMC10Q8N2F6 343 aa8.25□□□□□ -1.09
VPS45-203ENST00000419023 GPBAR1Q8TDU6 330 aa8.25□□□□□ -1.09
VPS45-203ENST00000419023 MRRFQ96E11 262 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms