RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 HMG20BQ9P0W2 317 aa15.74■□□□□ 0.11
HLA-DMB-258ENST00000418107 IQSEC3Q9UPP2 1182 aaPredicted RBP15.74■□□□□ 0.11
HLA-DMB-258ENST00000418107 CSADQ9Y600 493 aa15.74■□□□□ 0.11
HLA-DMB-258ENST00000418107 IDH1O75874 414 aaKnown RBP15.73■□□□□ 0.11
HLA-DMB-258ENST00000418107 MYCP01106 439 aaPredicted RBP15.73■□□□□ 0.11
HLA-DMB-258ENST00000418107 SLC4A3P48751 1232 aa15.73■□□□□ 0.11
HLA-DMB-258ENST00000418107 CACNB3P54284 484 aa15.73■□□□□ 0.11
HLA-DMB-258ENST00000418107 CHAF1AQ13111 956 aaPredicted RBP15.73■□□□□ 0.11
HLA-DMB-258ENST00000418107 CCDC171Q6TFL3 1326 aa15.72■□□□□ 0.11
HLA-DMB-258ENST00000418107 CYP2E1P05181 493 aaPredicted RBP15.72■□□□□ 0.11
HLA-DMB-258ENST00000418107 RASGRF1Q13972 1273 aa15.72■□□□□ 0.11
HLA-DMB-258ENST00000418107 ARHGEF6Q15052 776 aa15.72■□□□□ 0.11
HLA-DMB-258ENST00000418107 ZMYM1Q5SVZ6 1142 aa15.72■□□□□ 0.11
HLA-DMB-258ENST00000418107 SPDYE5A6NIY4 337 aa15.71■□□□□ 0.11
HLA-DMB-258ENST00000418107 ANAPC15P60006 121 aa15.71■□□□□ 0.11
HLA-DMB-258ENST00000418107 PTH1RQ03431 593 aa15.71■□□□□ 0.11
HLA-DMB-258ENST00000418107 MAP3K12Q12852 859 aa15.71■□□□□ 0.11
HLA-DMB-258ENST00000418107 SLC4A8Q2Y0W8 1093 aa15.71■□□□□ 0.11
HLA-DMB-258ENST00000418107 FBXO33Q7Z6M2 555 aa15.71■□□□□ 0.11
HLA-DMB-258ENST00000418107 NBPF11Q86T75 865 aa15.71■□□□□ 0.11
HLA-DMB-258ENST00000418107 ARHGAP39Q9C0H5 1083 aa15.71■□□□□ 0.11
HLA-DMB-258ENST00000418107 PIH1D3Q9NQM4 214 aaKnown RBP15.71■□□□□ 0.11
HLA-DMB-258ENST00000418107 DENND2AQ9ULE3 1009 aa15.71■□□□□ 0.11
HLA-DMB-258ENST00000418107 SNCAIPQ9Y6H5 919 aa15.71■□□□□ 0.11
HLA-DMB-258ENST00000418107 FXR1P51114 621 aaKnown RBP eCLIP15.7■□□□□ 0.1
HLA-DMB-258ENST00000418107 SLC9C2Q5TAH2 1124 aa15.7■□□□□ 0.1
HLA-DMB-258ENST00000418107 CCDC129Q6ZRS4 1044 aa15.7■□□□□ 0.1
HLA-DMB-258ENST00000418107 ZNF589Q86UQ0 364 aaPredicted RBP15.7■□□□□ 0.1
HLA-DMB-258ENST00000418107 SH3TC2Q8TF17 1288 aa15.7■□□□□ 0.1
HLA-DMB-258ENST00000418107 TEKT1Q969V4 418 aa15.7■□□□□ 0.1
HLA-DMB-258ENST00000418107 WRNIP1Q96S55 665 aa15.7■□□□□ 0.1
HLA-DMB-258ENST00000418107 SEC62Q99442 399 aaKnown RBP15.7■□□□□ 0.1
HLA-DMB-258ENST00000418107 KIF2CQ99661 725 aa15.7■□□□□ 0.1
HLA-DMB-258ENST00000418107 LRP2BPQ9P2M1 347 aa15.7■□□□□ 0.1
HLA-DMB-258ENST00000418107 RBM8AQ9Y5S9 174 aaKnown RBP15.7■□□□□ 0.1
HLA-DMB-258ENST00000418107 ZSWIM8A7E2V4 1837 aa15.69■□□□□ 0.1
HLA-DMB-258ENST00000418107 BTBD19C9JJ37 291 aa15.69■□□□□ 0.1
HLA-DMB-258ENST00000418107 CHGBP05060 677 aa15.69■□□□□ 0.1
HLA-DMB-258ENST00000418107 CETPP11597 493 aa15.69■□□□□ 0.1
HLA-DMB-258ENST00000418107 HSPA4P34932 840 aa15.69■□□□□ 0.1
HLA-DMB-258ENST00000418107 HDLBPQ00341 1268 aaKnown RBP15.69■□□□□ 0.1
HLA-DMB-258ENST00000418107 SLFNL1Q499Z3 407 aa15.69■□□□□ 0.1
HLA-DMB-258ENST00000418107 RNF20Q5VTR2 975 aa15.69■□□□□ 0.1
HLA-DMB-258ENST00000418107 ERO1BQ86YB8 467 aa15.69■□□□□ 0.1
HLA-DMB-258ENST00000418107 TBC1D22AQ8WUA7 517 aa15.69■□□□□ 0.1
HLA-DMB-258ENST00000418107 ZKSCAN4Q969J2 545 aaPredicted RBP15.69■□□□□ 0.1
HLA-DMB-258ENST00000418107 IRF6O14896 467 aa15.68■□□□□ 0.1
HLA-DMB-258ENST00000418107 SEMA3EO15041 775 aa15.68■□□□□ 0.1
HLA-DMB-258ENST00000418107 ST18O60284 1047 aa15.68■□□□□ 0.1
HLA-DMB-258ENST00000418107 TLR2O60603 784 aa15.68■□□□□ 0.1
HLA-DMB-258ENST00000418107 WDHD1O75717 1129 aaPredicted RBP15.68■□□□□ 0.1
HLA-DMB-258ENST00000418107 ECM2O94769 699 aaPredicted RBP15.68■□□□□ 0.1
HLA-DMB-258ENST00000418107 ZKSCAN1P17029 563 aaPredicted RBP15.68■□□□□ 0.1
HLA-DMB-258ENST00000418107 LACTBP83111 547 aaPredicted RBP15.68■□□□□ 0.1
HLA-DMB-258ENST00000418107 APPBP2Q92624 585 aa15.68■□□□□ 0.1
HLA-DMB-258ENST00000418107 TBC1D2Q9BYX2 928 aa15.68■□□□□ 0.1
HLA-DMB-258ENST00000418107 TMOD2Q9NZR1 351 aa15.68■□□□□ 0.1
HLA-DMB-258ENST00000418107 ABCF2Q9UG63 623 aa15.68■□□□□ 0.1
HLA-DMB-258ENST00000418107 COLQQ9Y215 455 aaPredicted RBP15.68■□□□□ 0.1
HLA-DMB-258ENST00000418107 CEP290O15078 2479 aa15.67■□□□□ 0.1
HLA-DMB-258ENST00000418107 M0R2C6 588 aa15.67■□□□□ 0.1
HLA-DMB-258ENST00000418107 PDE6AP16499 860 aa15.67■□□□□ 0.1
HLA-DMB-258ENST00000418107 ADD2P35612 726 aa15.67■□□□□ 0.1
HLA-DMB-258ENST00000418107 SNAPC2Q13487 334 aa15.67■□□□□ 0.1
HLA-DMB-258ENST00000418107 KIF22Q14807 665 aa15.67■□□□□ 0.1
HLA-DMB-258ENST00000418107 MAP4K1Q92918 833 aa15.67■□□□□ 0.1
HLA-DMB-258ENST00000418107 SNX21Q969T3 373 aa15.67■□□□□ 0.1
HLA-DMB-258ENST00000418107 ZDHHC15Q96MV8 337 aa15.67■□□□□ 0.1
HLA-DMB-258ENST00000418107 RAI14Q9P0K7 980 aa15.67■□□□□ 0.1
HLA-DMB-258ENST00000418107 PALD1Q9ULE6 856 aa15.67■□□□□ 0.1
HLA-DMB-258ENST00000418107 U3KPZ7 1027 aaPredicted RBP15.67■□□□□ 0.1
HLA-DMB-258ENST00000418107 DOCK2Q92608 1830 aa15.66■□□□□ 0.1
HLA-DMB-258ENST00000418107 NEK4P51957 841 aa15.66■□□□□ 0.1
HLA-DMB-258ENST00000418107 PPIL2Q13356 520 aa15.66■□□□□ 0.1
HLA-DMB-258ENST00000418107 UBE3CQ15386 1083 aa15.66■□□□□ 0.1
HLA-DMB-258ENST00000418107 CREB3L3Q68CJ9 461 aa15.66■□□□□ 0.1
HLA-DMB-258ENST00000418107 APOBEC3HQ6NTF7 200 aaKnown RBP15.66■□□□□ 0.1
HLA-DMB-258ENST00000418107 FAM83AQ86UY5 434 aa15.66■□□□□ 0.1
HLA-DMB-258ENST00000418107 MAGEB6Q8N7X4 407 aa15.66■□□□□ 0.1
HLA-DMB-258ENST00000418107 OSBP2Q969R2 916 aa15.66■□□□□ 0.1
HLA-DMB-258ENST00000418107 ZCCHC17Q9NP64 241 aaKnown RBP15.66■□□□□ 0.1
HLA-DMB-258ENST00000418107 MAST3O60307 1309 aa15.66■□□□□ 0.1
HLA-DMB-258ENST00000418107 ZNF532Q9HCE3 1301 aa15.66■□□□□ 0.1
HLA-DMB-258ENST00000418107 MIGA2Q7L4E1 593 aa15.65■□□□□ 0.1
HLA-DMB-258ENST00000418107 SNX14Q9Y5W7 946 aa15.65■□□□□ 0.1
HLA-DMB-258ENST00000418107 H0YGN5 161 aa15.64■□□□□ 0.09
HLA-DMB-258ENST00000418107 SLC27A2O14975 620 aa15.64■□□□□ 0.09
HLA-DMB-258ENST00000418107 HSP90AA1P07900 732 aaKnown RBP15.64■□□□□ 0.09
HLA-DMB-258ENST00000418107 NECTIN1Q15223 517 aa15.64■□□□□ 0.09
HLA-DMB-258ENST00000418107 FKBP1CQ5VVH2 108 aa15.64■□□□□ 0.09
HLA-DMB-258ENST00000418107 DCAF15Q66K64 600 aa15.64■□□□□ 0.09
HLA-DMB-258ENST00000418107 HOOK2Q96ED9 719 aa15.64■□□□□ 0.09
HLA-DMB-258ENST00000418107 DSCC1Q9BVC3 393 aa15.64■□□□□ 0.09
HLA-DMB-258ENST00000418107 ZNF341Q9BYN7 854 aa15.64■□□□□ 0.09
HLA-DMB-258ENST00000418107 CPA4Q9UI42 421 aa15.64■□□□□ 0.09
HLA-DMB-258ENST00000418107 TRIOBPQ9H2D6 2365 aa15.64■□□□□ 0.09
HLA-DMB-258ENST00000418107 GPAA1O43292 621 aa15.63■□□□□ 0.09
HLA-DMB-258ENST00000418107 GNRH1P01148 92 aa15.63■□□□□ 0.09
HLA-DMB-258ENST00000418107 CTGFP29279 349 aa15.63■□□□□ 0.09
HLA-DMB-258ENST00000418107 INPP5BP32019 993 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms