RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 ZBTB12Q9Y330 459 aaPredicted RBP19.98■□□□□ 0.79
CALD1-204ENST00000417172 WDHD1O75717 1129 aaPredicted RBP19.97■□□□□ 0.79
CALD1-204ENST00000417172 CTDNEP1O95476 244 aa19.97■□□□□ 0.79
CALD1-204ENST00000417172 FGRP09769 529 aa19.97■□□□□ 0.79
CALD1-204ENST00000417172 RBM5P52756 815 aaKnown RBP eCLIP19.97■□□□□ 0.79
CALD1-204ENST00000417172 CACNB3P54284 484 aa19.97■□□□□ 0.79
CALD1-204ENST00000417172 NUCB2P80303 420 aa19.97■□□□□ 0.79
CALD1-204ENST00000417172 FAM47AQ5JRC9 791 aa19.97■□□□□ 0.79
CALD1-204ENST00000417172 TMEM87BQ96K49 555 aa19.97■□□□□ 0.79
CALD1-204ENST00000417172 POLR3DP05423 398 aaPredicted RBP19.96■□□□□ 0.79
CALD1-204ENST00000417172 PRELPP51888 382 aa19.96■□□□□ 0.79
CALD1-204ENST00000417172 CERS3Q8IU89 383 aa19.96■□□□□ 0.79
CALD1-204ENST00000417172 NIM1KQ8IY84 436 aa19.96■□□□□ 0.79
CALD1-204ENST00000417172 ESR2Q92731 530 aa19.96■□□□□ 0.79
CALD1-204ENST00000417172 ZDHHC15Q96MV8 337 aa19.96■□□□□ 0.79
CALD1-204ENST00000417172 NMT2O60551 498 aa19.96■□□□□ 0.79
CALD1-204ENST00000417172 NFIAQ12857 509 aa19.96■□□□□ 0.79
CALD1-204ENST00000417172 DDX11Q96FC9 970 aa19.96■□□□□ 0.79
CALD1-204ENST00000417172 SYT1P21579 422 aa19.95■□□□□ 0.78
CALD1-204ENST00000417172 RSBN1LQ6PCB5 846 aaPredicted RBP19.95■□□□□ 0.78
CALD1-204ENST00000417172 APOA5Q6Q788 366 aa19.95■□□□□ 0.78
CALD1-204ENST00000417172 NFXL1Q6ZNB6 911 aa19.95■□□□□ 0.78
CALD1-204ENST00000417172 CCDC144CPQ8IYA2 1237 aa19.95■□□□□ 0.78
CALD1-204ENST00000417172 ZNRF3Q9ULT6 936 aa19.95■□□□□ 0.78
CALD1-204ENST00000417172 ROBO3Q96MS0 1386 aa19.95■□□□□ 0.78
CALD1-204ENST00000417172 MICU3Q86XE3 530 aa19.94■□□□□ 0.78
CALD1-204ENST00000417172 NSUN7Q8NE18 718 aaKnown RBP19.94■□□□□ 0.78
CALD1-204ENST00000417172 MYH8P13535 1937 aa19.94■□□□□ 0.78
CALD1-204ENST00000417172 TNKSO95271 1327 aa19.94■□□□□ 0.78
CALD1-204ENST00000417172 ORC4O43929 436 aa19.94■□□□□ 0.78
CALD1-204ENST00000417172 BRD1O95696 1058 aa19.94■□□□□ 0.78
CALD1-204ENST00000417172 VIL1P09327 827 aaKnown RBP19.94■□□□□ 0.78
CALD1-204ENST00000417172 UBAC1Q9BSL1 405 aa19.94■□□□□ 0.78
CALD1-204ENST00000417172 FHDC1Q9C0D6 1143 aaPredicted RBP19.94■□□□□ 0.78
CALD1-204ENST00000417172 SLC3A2P08195 630 aaKnown RBP19.93■□□□□ 0.78
CALD1-204ENST00000417172 TCHHQ07283 1943 aa19.93■□□□□ 0.78
CALD1-204ENST00000417172 CXCL9Q07325 125 aa19.93■□□□□ 0.78
CALD1-204ENST00000417172 PDE4BQ07343 736 aa19.93■□□□□ 0.78
CALD1-204ENST00000417172 WTAPQ15007 396 aa19.93■□□□□ 0.78
CALD1-204ENST00000417172 SGMS1Q86VZ5 419 aa19.93■□□□□ 0.78
CALD1-204ENST00000417172 ZFPM1Q8IX07 1006 aa19.93■□□□□ 0.78
CALD1-204ENST00000417172 ENAHQ8N8S7 591 aaPredicted RBP19.93■□□□□ 0.78
CALD1-204ENST00000417172 ANP32EQ9BTT0 268 aa19.93■□□□□ 0.78
CALD1-204ENST00000417172 VPS33BQ9H267 617 aa19.93■□□□□ 0.78
CALD1-204ENST00000417172 SERPINA10Q9UK55 444 aa19.93■□□□□ 0.78
CALD1-204ENST00000417172 SIPA1L1O43166 1804 aa19.93■□□□□ 0.78
CALD1-204ENST00000417172 PTPDC1A2A3K4 754 aa19.92■□□□□ 0.78
CALD1-204ENST00000417172 SLURP2P0DP57 97 aa19.92■□□□□ 0.78
CALD1-204ENST00000417172 LIFRP42702 1097 aa19.92■□□□□ 0.78
CALD1-204ENST00000417172 SEC23AQ15436 765 aa19.92■□□□□ 0.78
CALD1-204ENST00000417172 CFAP100Q494V2 611 aa19.92■□□□□ 0.78
CALD1-204ENST00000417172 AMOTL1Q8IY63 956 aa19.92■□□□□ 0.78
CALD1-204ENST00000417172 GMLQ99445 158 aa19.92■□□□□ 0.78
CALD1-204ENST00000417172 STX6O43752 255 aa19.92■□□□□ 0.78
CALD1-204ENST00000417172 PCP11498 1178 aaKnown RBP19.92■□□□□ 0.78
CALD1-204ENST00000417172 FOXD4L6Q3SYB3 417 aaPredicted RBP19.92■□□□□ 0.78
CALD1-204ENST00000417172 FOXD4L3Q6VB84 417 aaPredicted RBP19.92■□□□□ 0.78
CALD1-204ENST00000417172 SMARCC2Q8TAQ2 1214 aa19.92■□□□□ 0.78
CALD1-204ENST00000417172 ZSCAN10Q96SZ4 725 aaPredicted RBP19.92■□□□□ 0.78
CALD1-204ENST00000417172 CCDC69A6NI79 296 aa19.91■□□□□ 0.78
CALD1-204ENST00000417172 CDC27P30260 824 aa19.91■□□□□ 0.78
CALD1-204ENST00000417172 FOSBP53539 338 aa19.91■□□□□ 0.78
CALD1-204ENST00000417172 HDLBPQ00341 1268 aaKnown RBP19.91■□□□□ 0.78
CALD1-204ENST00000417172 TCP10Q12799 353 aa19.91■□□□□ 0.78
CALD1-204ENST00000417172 SART3Q15020 963 aaKnown RBP19.91■□□□□ 0.78
CALD1-204ENST00000417172 PRMT6Q96LA8 375 aaPredicted RBP19.91■□□□□ 0.78
CALD1-204ENST00000417172 MRIQ9BWK5 157 aa19.91■□□□□ 0.78
CALD1-204ENST00000417172 TDRD3Q9H7E2 651 aaKnown RBP19.91■□□□□ 0.78
CALD1-204ENST00000417172 SHTN1A0MZ66 631 aa19.9■□□□□ 0.78
CALD1-204ENST00000417172 ERICH2A1L162 156 aa19.9■□□□□ 0.78
CALD1-204ENST00000417172 TSPY2A6NKD2 308 aa19.9■□□□□ 0.78
CALD1-204ENST00000417172 MCM4P33991 863 aa19.9■□□□□ 0.78
CALD1-204ENST00000417172 ADD1P35611 737 aaKnown RBP19.9■□□□□ 0.78
CALD1-204ENST00000417172 METAP2P50579 478 aaKnown RBP eCLIP19.9■□□□□ 0.78
CALD1-204ENST00000417172 OSBPL5Q9H0X9 879 aaPredicted RBP19.9■□□□□ 0.78
CALD1-204ENST00000417172 MKNK2Q9HBH9 465 aa19.9■□□□□ 0.78
CALD1-204ENST00000417172 SLC12A7Q9Y666 1083 aa19.9■□□□□ 0.78
CALD1-204ENST00000417172 VPS37CA5D8V6 355 aaPredicted RBP19.9■□□□□ 0.78
CALD1-204ENST00000417172 ZBTB43O43298 467 aa19.9■□□□□ 0.78
CALD1-204ENST00000417172 CDK8P49336 464 aa19.9■□□□□ 0.78
CALD1-204ENST00000417172 TFAP4Q01664 338 aa19.9■□□□□ 0.78
CALD1-204ENST00000417172 JDP2Q8WYK2 163 aa19.9■□□□□ 0.78
CALD1-204ENST00000417172 MTMR6Q9Y217 621 aa19.9■□□□□ 0.78
CALD1-204ENST00000417172 MYO3BQ8WXR4 1341 aa19.89■□□□□ 0.77
CALD1-204ENST00000417172 BAG4O95429 457 aaKnown RBP19.89■□□□□ 0.77
CALD1-204ENST00000417172 RASA1P20936 1047 aa19.89■□□□□ 0.77
CALD1-204ENST00000417172 LARP1BQ659C4 914 aaKnown RBP19.89■□□□□ 0.77
CALD1-204ENST00000417172 C16orf86Q6ZW13 317 aa19.89■□□□□ 0.77
CALD1-204ENST00000417172 LLPHQ9BRT6 129 aaKnown RBP19.89■□□□□ 0.77
CALD1-204ENST00000417172 FAM217BQ9NTX9 383 aaPredicted RBP19.89■□□□□ 0.77
CALD1-204ENST00000417172 FAM198AQ9UFP1 575 aa19.89■□□□□ 0.77
CALD1-204ENST00000417172 WDR33Q9C0J8 1336 aaKnown RBP19.89■□□□□ 0.77
CALD1-204ENST00000417172 GOLGA8AA7E2F4 631 aa19.88■□□□□ 0.77
CALD1-204ENST00000417172 FDPSP14324 419 aaKnown RBP19.88■□□□□ 0.77
CALD1-204ENST00000417172 CDC37L1Q7L3B6 337 aa19.88■□□□□ 0.77
CALD1-204ENST00000417172 IQCA1Q86XH1 822 aa19.88■□□□□ 0.77
CALD1-204ENST00000417172 IL17RBQ9NRM6 502 aa19.88■□□□□ 0.77
CALD1-204ENST00000417172 LTBP3Q9NS15 1303 aa19.88■□□□□ 0.77
CALD1-204ENST00000417172 ZSCAN22P10073 491 aaPredicted RBP19.88■□□□□ 0.77
CALD1-204ENST00000417172 IFIT1BQ5T764 474 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms