RNA–Protein interactions for RNA: ENST00000416942.2

GTF3AP1-201, Transcript of general transcription factor IIIA pseudogene 1, humanhuman

BASIC

Gene GTF3AP1, Length 1,004 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AP1-201ENST00000416942 ARNTP27540 789 aa9.52□□□□□ -0.89
GTF3AP1-201ENST00000416942 ARMC10Q8N2F6 343 aa9.52□□□□□ -0.89
GTF3AP1-201ENST00000416942 ZNF142P52746 1687 aaPredicted RBP9.51□□□□□ -0.89
GTF3AP1-201ENST00000416942 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.51□□□□□ -0.89
GTF3AP1-201ENST00000416942 VWDEQ8N2E2 1590 aa9.51□□□□□ -0.89
GTF3AP1-201ENST00000416942 TIAF1O95411 115 aa9.51□□□□□ -0.89
GTF3AP1-201ENST00000416942 H2AFB1P0C5Y9 115 aa9.51□□□□□ -0.89
GTF3AP1-201ENST00000416942 H2AFB2P0C5Z0 115 aa9.51□□□□□ -0.89
GTF3AP1-201ENST00000416942 ZNF16P17020 682 aaPredicted RBP9.51□□□□□ -0.89
GTF3AP1-201ENST00000416942 MEI1Q5TIA1 1274 aa9.51□□□□□ -0.89
GTF3AP1-201ENST00000416942 SV2BQ7L1I2 683 aa9.51□□□□□ -0.89
GTF3AP1-201ENST00000416942 UTP4Q969X6 686 aaKnown RBP9.51□□□□□ -0.89
GTF3AP1-201ENST00000416942 EMILIN2Q9BXX0 1053 aa9.51□□□□□ -0.89
GTF3AP1-201ENST00000416942 CCDC86Q9H6F5 360 aaKnown RBP9.51□□□□□ -0.89
GTF3AP1-201ENST00000416942 RAD18Q9NS91 495 aa9.51□□□□□ -0.89
GTF3AP1-201ENST00000416942 VTI1BQ9UEU0 232 aa9.51□□□□□ -0.89
GTF3AP1-201ENST00000416942 SAMM50Q9Y512 469 aa9.51□□□□□ -0.89
GTF3AP1-201ENST00000416942 A2ML1A8K2U0 1454 aa9.51□□□□□ -0.89
GTF3AP1-201ENST00000416942 NEURL4Q96JN8 1562 aa9.5□□□□□ -0.89
GTF3AP1-201ENST00000416942 DRD2P14416 443 aa9.5□□□□□ -0.89
GTF3AP1-201ENST00000416942 BMP6P22004 513 aa9.5□□□□□ -0.89
GTF3AP1-201ENST00000416942 ITGAEP38570 1179 aa9.5□□□□□ -0.89
GTF3AP1-201ENST00000416942 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.5□□□□□ -0.89
GTF3AP1-201ENST00000416942 KCNB2Q92953 911 aa9.5□□□□□ -0.89
GTF3AP1-201ENST00000416942 CRELD1Q96HD1 420 aa9.5□□□□□ -0.89
GTF3AP1-201ENST00000416942 WDR18Q9BV38 432 aa9.5□□□□□ -0.89
GTF3AP1-201ENST00000416942 CBX8Q9HC52 389 aa9.5□□□□□ -0.89
GTF3AP1-201ENST00000416942 KRT82Q9NSB4 513 aa9.5□□□□□ -0.89
GTF3AP1-201ENST00000416942 MYO5CQ9NQX4 1742 aa9.5□□□□□ -0.89
GTF3AP1-201ENST00000416942 LRRC7Q96NW7 1537 aa9.5□□□□□ -0.89
GTF3AP1-201ENST00000416942 DNMT1P26358 1616 aaKnown RBP9.49□□□□□ -0.89
GTF3AP1-201ENST00000416942 MROH2AA6NES4 1674 aa9.49□□□□□ -0.89
GTF3AP1-201ENST00000416942 DYRK3O43781 588 aa9.49□□□□□ -0.89
GTF3AP1-201ENST00000416942 AOC2O75106 756 aa9.49□□□□□ -0.89
GTF3AP1-201ENST00000416942 ADH5P11766 374 aa9.49□□□□□ -0.89
GTF3AP1-201ENST00000416942 LIG1P18858 919 aa9.49□□□□□ -0.89
GTF3AP1-201ENST00000416942 SOX4Q06945 474 aaPredicted RBP9.49□□□□□ -0.89
GTF3AP1-201ENST00000416942 ZNF252P-AS1Q0IIN9 211 aa9.49□□□□□ -0.89
GTF3AP1-201ENST00000416942 CCDC85BQ15834 202 aaPredicted RBP9.49□□□□□ -0.89
GTF3AP1-201ENST00000416942 AKAP4Q5JQC9 854 aa9.49□□□□□ -0.89
GTF3AP1-201ENST00000416942 PRR23CQ6ZRP0 262 aa9.49□□□□□ -0.89
GTF3AP1-201ENST00000416942 MYRFLQ96LU7 910 aa9.49□□□□□ -0.89
GTF3AP1-201ENST00000416942 CLTCQ00610 1675 aaKnown RBP9.48□□□□□ -0.89
GTF3AP1-201ENST00000416942 NPHP4O75161 1426 aaPredicted RBP9.48□□□□□ -0.89
GTF3AP1-201ENST00000416942 DHX15O43143 795 aaKnown RBP9.48□□□□□ -0.89
GTF3AP1-201ENST00000416942 GAS2O43903 313 aaKnown RBP9.48□□□□□ -0.89
GTF3AP1-201ENST00000416942 ZNF862O60290 1169 aa9.48□□□□□ -0.89
GTF3AP1-201ENST00000416942 TAF1CQ15572 869 aaPredicted RBP9.48□□□□□ -0.89
GTF3AP1-201ENST00000416942 PCNX4Q63HM2 1172 aa9.48□□□□□ -0.89
GTF3AP1-201ENST00000416942 MAP1SQ66K74 1059 aaPredicted RBP9.48□□□□□ -0.89
GTF3AP1-201ENST00000416942 WDR89Q96FK6 387 aaPredicted RBP9.48□□□□□ -0.89
GTF3AP1-201ENST00000416942 CDK11AQ9UQ88 783 aaPredicted RBP9.48□□□□□ -0.89
GTF3AP1-201ENST00000416942 KIF14Q15058 1648 aa9.48□□□□□ -0.89
GTF3AP1-201ENST00000416942 K7ELQ4 463 aaPredicted RBP9.47□□□□□ -0.89
GTF3AP1-201ENST00000416942 ST13P50502 369 aaKnown RBP9.47□□□□□ -0.89
GTF3AP1-201ENST00000416942 HNRNPUQ00839 825 aaKnown RBP eCLIP9.47□□□□□ -0.89
GTF3AP1-201ENST00000416942 RASIP1Q5U651 963 aa9.47□□□□□ -0.89
GTF3AP1-201ENST00000416942 C2CD4AQ8NCU7 369 aaPredicted RBP9.47□□□□□ -0.89
GTF3AP1-201ENST00000416942 GRIN3AQ8TCU5 1115 aa9.47□□□□□ -0.89
GTF3AP1-201ENST00000416942 BCL11AQ9H165 835 aa9.47□□□□□ -0.89
GTF3AP1-201ENST00000416942 SEMA6BQ9H3T3 888 aa9.47□□□□□ -0.89
GTF3AP1-201ENST00000416942 SYNGAP1Q96PV0 1343 aa9.47□□□□□ -0.89
GTF3AP1-201ENST00000416942 USP31Q70CQ4 1352 aa9.47□□□□□ -0.89
GTF3AP1-201ENST00000416942 KIDINS220Q9ULH0 1771 aa9.46□□□□□ -0.9
GTF3AP1-201ENST00000416942 RBM47A0AV96 593 aaKnown RBP9.46□□□□□ -0.9
GTF3AP1-201ENST00000416942 BMP3P12645 472 aa9.46□□□□□ -0.9
GTF3AP1-201ENST00000416942 MRPL58Q14197 206 aaKnown RBP9.46□□□□□ -0.9
GTF3AP1-201ENST00000416942 KIF4BQ2VIQ3 1234 aa9.46□□□□□ -0.9
GTF3AP1-201ENST00000416942 FAM20CQ8IXL6 584 aa9.46□□□□□ -0.9
GTF3AP1-201ENST00000416942 THEMISQ8N1K5 641 aaPredicted RBP9.46□□□□□ -0.9
GTF3AP1-201ENST00000416942 AP4E1Q9UPM8 1137 aa9.46□□□□□ -0.9
GTF3AP1-201ENST00000416942 HIF3AQ9Y2N7 669 aa9.46□□□□□ -0.9
GTF3AP1-201ENST00000416942 RAXQ9Y2V3 346 aa9.46□□□□□ -0.9
GTF3AP1-201ENST00000416942 CCDC9Q9Y3X0 531 aaKnown RBP9.46□□□□□ -0.9
GTF3AP1-201ENST00000416942 SPAG9O60271 1321 aaKnown RBP9.46□□□□□ -0.9
GTF3AP1-201ENST00000416942 ADAM23O75077 832 aa9.45□□□□□ -0.9
GTF3AP1-201ENST00000416942 LRRC14Q15048 493 aa9.45□□□□□ -0.9
GTF3AP1-201ENST00000416942 LLGL2Q6P1M3 1020 aa9.45□□□□□ -0.9
GTF3AP1-201ENST00000416942 MPRIPQ6WCQ1 1025 aa9.45□□□□□ -0.9
GTF3AP1-201ENST00000416942 RGS22Q8NE09 1264 aa9.45□□□□□ -0.9
GTF3AP1-201ENST00000416942 GPBAR1Q8TDU6 330 aa9.45□□□□□ -0.9
GTF3AP1-201ENST00000416942 PPP1R9AQ9ULJ8 1098 aa9.45□□□□□ -0.9
GTF3AP1-201ENST00000416942 CYP8B1Q9UNU6 501 aa9.45□□□□□ -0.9
GTF3AP1-201ENST00000416942 TNRQ92752 1358 aa9.45□□□□□ -0.9
GTF3AP1-201ENST00000416942 RNF17Q9BXT8 1623 aaKnown RBP9.45□□□□□ -0.9
GTF3AP1-201ENST00000416942 TMPRSS2O15393 492 aa9.44□□□□□ -0.9
GTF3AP1-201ENST00000416942 SLFN14P0C7P3 912 aa9.44□□□□□ -0.9
GTF3AP1-201ENST00000416942 HNRNPMP52272 730 aaKnown RBP eCLIP9.44□□□□□ -0.9
GTF3AP1-201ENST00000416942 SGO2Q562F6 1265 aa9.44□□□□□ -0.9
GTF3AP1-201ENST00000416942 TTBK2Q6IQ55 1244 aa9.44□□□□□ -0.9
GTF3AP1-201ENST00000416942 DYMQ7RTS9 669 aa9.44□□□□□ -0.9
GTF3AP1-201ENST00000416942 NOC4LQ9BVI4 516 aaKnown RBP9.44□□□□□ -0.9
GTF3AP1-201ENST00000416942 CACNA2D2Q9NY47 1150 aa9.44□□□□□ -0.9
GTF3AP1-201ENST00000416942 ACTL7BQ9Y614 415 aa9.44□□□□□ -0.9
GTF3AP1-201ENST00000416942 POLR1AO95602 1720 aaPredicted RBP9.44□□□□□ -0.9
GTF3AP1-201ENST00000416942 STRCP1A6NGW2 1772 aa9.43□□□□□ -0.9
GTF3AP1-201ENST00000416942 ABCC1P33527 1531 aa9.43□□□□□ -0.9
GTF3AP1-201ENST00000416942 TROQ12816 1431 aaPredicted RBP9.43□□□□□ -0.9
GTF3AP1-201ENST00000416942 TRIM37O94972 964 aa9.43□□□□□ -0.9
GTF3AP1-201ENST00000416942 USP11P51784 963 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms