RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 GRIN3BO60391 1043 aa7.95□□□□□ -1.14
CSTF1-202ENST00000415828 RGS19P49795 217 aa7.95□□□□□ -1.14
CSTF1-202ENST00000415828 EHHADHQ08426 723 aa7.95□□□□□ -1.14
CSTF1-202ENST00000415828 SETDB1Q15047 1291 aa7.95□□□□□ -1.14
CSTF1-202ENST00000415828 PRSS36Q5K4E3 855 aa7.95□□□□□ -1.14
CSTF1-202ENST00000415828 ABHD8Q96I13 439 aa7.95□□□□□ -1.14
CSTF1-202ENST00000415828 SPACA7Q96KW9 195 aa7.95□□□□□ -1.14
CSTF1-202ENST00000415828 SSBP4Q9BWG4 385 aaPredicted RBP7.95□□□□□ -1.14
CSTF1-202ENST00000415828 CNTN3Q9P232 1028 aa7.95□□□□□ -1.14
CSTF1-202ENST00000415828 PARP4Q9UKK3 1724 aaKnown RBP7.95□□□□□ -1.14
CSTF1-202ENST00000415828 PAPPAQ13219 1627 aa7.94□□□□□ -1.14
CSTF1-202ENST00000415828 PATL2C9JE40 543 aaKnown RBP7.94□□□□□ -1.14
CSTF1-202ENST00000415828 H2AFB1P0C5Y9 115 aa7.94□□□□□ -1.14
CSTF1-202ENST00000415828 H2AFB2P0C5Z0 115 aa7.94□□□□□ -1.14
CSTF1-202ENST00000415828 CES1P23141 567 aa7.94□□□□□ -1.14
CSTF1-202ENST00000415828 SLC15A2Q16348 729 aa7.94□□□□□ -1.14
CSTF1-202ENST00000415828 CEP135Q66GS9 1140 aa7.94□□□□□ -1.14
CSTF1-202ENST00000415828 XKR5Q6UX68 686 aa7.94□□□□□ -1.14
CSTF1-202ENST00000415828 NCAPG2Q86XI2 1143 aa7.94□□□□□ -1.14
CSTF1-202ENST00000415828 GJD3Q8N144 294 aa7.94□□□□□ -1.14
CSTF1-202ENST00000415828 C1orf127Q8N9H9 656 aa7.94□□□□□ -1.14
CSTF1-202ENST00000415828 LACRTQ9GZZ8 138 aa7.94□□□□□ -1.14
CSTF1-202ENST00000415828 RASSF4Q9H2L5 321 aa7.94□□□□□ -1.14
CSTF1-202ENST00000415828 TECPR2O15040 1411 aa7.94□□□□□ -1.14
CSTF1-202ENST00000415828 TULP4Q9NRJ4 1543 aa7.93□□□□□ -1.14
CSTF1-202ENST00000415828 AKAP12Q02952 1782 aa7.93□□□□□ -1.14
CSTF1-202ENST00000415828 PHACTR2O75167 634 aa7.93□□□□□ -1.14
CSTF1-202ENST00000415828 SMNDC1O75940 238 aaKnown RBP eCLIP7.93□□□□□ -1.14
CSTF1-202ENST00000415828 FOXD3Q9UJU5 478 aaPredicted RBP7.93□□□□□ -1.14
CSTF1-202ENST00000415828 PPME1Q9Y570 386 aa7.93□□□□□ -1.14
CSTF1-202ENST00000415828 KIF1AQ12756 1690 aa7.92□□□□□ -1.14
CSTF1-202ENST00000415828 LINC01387J3KSC0 135 aa7.92□□□□□ -1.14
CSTF1-202ENST00000415828 PLSCR1O15162 318 aa7.92□□□□□ -1.14
CSTF1-202ENST00000415828 TNFRSF21O75509 655 aa7.92□□□□□ -1.14
CSTF1-202ENST00000415828 ALX3O95076 343 aa7.92□□□□□ -1.14
CSTF1-202ENST00000415828 KIF4AO95239 1232 aa7.92□□□□□ -1.14
CSTF1-202ENST00000415828 FOXD4L6Q3SYB3 417 aaPredicted RBP7.92□□□□□ -1.14
CSTF1-202ENST00000415828 ADAMTSL4Q6UY14 1074 aa7.92□□□□□ -1.14
CSTF1-202ENST00000415828 FOXD4L3Q6VB84 417 aaPredicted RBP7.92□□□□□ -1.14
CSTF1-202ENST00000415828 CACTIN-AS1Q8N1I8 211 aa7.92□□□□□ -1.14
CSTF1-202ENST00000415828 SNX29Q8TEQ0 813 aa7.92□□□□□ -1.14
CSTF1-202ENST00000415828 MEGF10Q96KG7 1140 aa7.92□□□□□ -1.14
CSTF1-202ENST00000415828 PSMG3-AS1Q96PY0 264 aa7.92□□□□□ -1.14
CSTF1-202ENST00000415828 AKTIPQ9H8T0 292 aa7.92□□□□□ -1.14
CSTF1-202ENST00000415828 NMRK2Q9NPI5 230 aa7.92□□□□□ -1.14
CSTF1-202ENST00000415828 SLC52A1Q9NWF4 448 aa7.92□□□□□ -1.14
CSTF1-202ENST00000415828 SZT2Q5T011 3432 aa7.92□□□□□ -1.14
CSTF1-202ENST00000415828 FOXN1O15353 648 aa7.91□□□□□ -1.14
CSTF1-202ENST00000415828 MAPK1P28482 360 aa7.91□□□□□ -1.14
CSTF1-202ENST00000415828 CDC25BP30305 580 aa7.91□□□□□ -1.14
CSTF1-202ENST00000415828 PDE3BQ13370 1112 aa7.91□□□□□ -1.14
CSTF1-202ENST00000415828 TXNDC11Q6PKC3 985 aa7.91□□□□□ -1.14
CSTF1-202ENST00000415828 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.91□□□□□ -1.14
CSTF1-202ENST00000415828 MRPL18Q9H0U6 180 aaKnown RBP7.91□□□□□ -1.14
CSTF1-202ENST00000415828 MUC3BQ9H195 1237 aa7.91□□□□□ -1.14
CSTF1-202ENST00000415828 SRA1Q9HD15 236 aaKnown RBP7.91□□□□□ -1.14
CSTF1-202ENST00000415828 STK32BQ9NY57 414 aa7.91□□□□□ -1.14
CSTF1-202ENST00000415828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.91□□□□□ -1.14
CSTF1-202ENST00000415828 SPATA31A1Q5TZJ5 1347 aa7.91□□□□□ -1.14
CSTF1-202ENST00000415828 CDC42BPGQ6DT37 1551 aa7.91□□□□□ -1.14
CSTF1-202ENST00000415828 FMN2Q9NZ56 1722 aa7.91□□□□□ -1.14
CSTF1-202ENST00000415828 VIRMAQ69YN4 1812 aaKnown RBP7.91□□□□□ -1.14
CSTF1-202ENST00000415828 KAT6BQ8WYB5 2073 aa7.91□□□□□ -1.14
CSTF1-202ENST00000415828 IQGAP3Q86VI3 1631 aa7.9□□□□□ -1.14
CSTF1-202ENST00000415828 TNS3Q68CZ2 1445 aa7.9□□□□□ -1.14
CSTF1-202ENST00000415828 DHX57Q6P158 1386 aaKnown RBP7.9□□□□□ -1.14
CSTF1-202ENST00000415828 ROBO2Q9HCK4 1378 aa7.9□□□□□ -1.14
CSTF1-202ENST00000415828 EREGO14944 169 aa7.9□□□□□ -1.14
CSTF1-202ENST00000415828 CDC27P30260 824 aa7.9□□□□□ -1.14
CSTF1-202ENST00000415828 MAP4K3Q8IVH8 894 aa7.9□□□□□ -1.14
CSTF1-202ENST00000415828 CEP120Q8N960 986 aa7.9□□□□□ -1.14
CSTF1-202ENST00000415828 GALNT11Q8NCW6 608 aa7.9□□□□□ -1.14
CSTF1-202ENST00000415828 PBX4Q9BYU1 374 aa7.9□□□□□ -1.14
CSTF1-202ENST00000415828 CHRDQ9H2X0 955 aa7.9□□□□□ -1.14
CSTF1-202ENST00000415828 DCTN4Q9UJW0 460 aa7.9□□□□□ -1.14
CSTF1-202ENST00000415828 TRPM3Q9HCF6 1732 aaPredicted RBP7.89□□□□□ -1.15
CSTF1-202ENST00000415828 ALS2Q96Q42 1657 aa7.89□□□□□ -1.15
CSTF1-202ENST00000415828 PHRF1Q9P1Y6 1649 aaKnown RBP7.89□□□□□ -1.15
CSTF1-202ENST00000415828 RRBP1Q9P2E9 1410 aaKnown RBP7.89□□□□□ -1.15
CSTF1-202ENST00000415828 SCO2A0A1W2PP80 73 aa7.89□□□□□ -1.15
CSTF1-202ENST00000415828 CCDC85CA6NKD9 419 aa7.89□□□□□ -1.15
CSTF1-202ENST00000415828 F8W735 103 aaPredicted RBP7.89□□□□□ -1.15
CSTF1-202ENST00000415828 TSPY4P0CV99 314 aa7.89□□□□□ -1.15
CSTF1-202ENST00000415828 TSPY10P0CW01 314 aa7.89□□□□□ -1.15
CSTF1-202ENST00000415828 HOMEZQ8IX15 550 aa7.89□□□□□ -1.15
CSTF1-202ENST00000415828 AGGF1Q8N302 714 aaeCLIP7.89□□□□□ -1.15
CSTF1-202ENST00000415828 DCAF11Q8TEB1 546 aa7.89□□□□□ -1.15
CSTF1-202ENST00000415828 PMEPA1Q969W9 287 aa7.89□□□□□ -1.15
CSTF1-202ENST00000415828 CITED4Q96RK1 184 aa7.89□□□□□ -1.15
CSTF1-202ENST00000415828 SH2B1Q9NRF2 756 aaPredicted RBP7.89□□□□□ -1.15
CSTF1-202ENST00000415828 COL6A3P12111 3177 aa7.88□□□□□ -1.15
CSTF1-202ENST00000415828 WNK3Q9BYP7 1800 aa7.88□□□□□ -1.15
CSTF1-202ENST00000415828 POLR3DP05423 398 aaPredicted RBP7.88□□□□□ -1.15
CSTF1-202ENST00000415828 ACPPP15309 386 aa7.88□□□□□ -1.15
CSTF1-202ENST00000415828 KRTAP1-3Q8IUG1 177 aa7.88□□□□□ -1.15
CSTF1-202ENST00000415828 TMEM130Q8N3G9 435 aa7.88□□□□□ -1.15
CSTF1-202ENST00000415828 CARD10Q9BWT7 1032 aa7.88□□□□□ -1.15
CSTF1-202ENST00000415828 NIF3L1Q9GZT8 377 aa7.88□□□□□ -1.15
CSTF1-202ENST00000415828 USP35Q9P2H5 1018 aa7.88□□□□□ -1.15
CSTF1-202ENST00000415828 PKD1L3Q7Z443 1732 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms