RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 MAPK8IP1Q9UQF2 711 aa6.3□□□□□ -1.4
TRAPPC13-203ENST00000415825 USPL1Q5W0Q7 1092 aa6.29□□□□□ -1.4
TRAPPC13-203ENST00000415825 MAP1SQ66K74 1059 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-203ENST00000415825 SULF2Q8IWU5 870 aa6.29□□□□□ -1.4
TRAPPC13-203ENST00000415825 ABHD4Q8TB40 342 aa6.29□□□□□ -1.4
TRAPPC13-203ENST00000415825 RELTQ969Z4 430 aa6.29□□□□□ -1.4
TRAPPC13-203ENST00000415825 TPX2Q9ULW0 747 aaKnown RBP6.29□□□□□ -1.4
TRAPPC13-203ENST00000415825 SAMM50Q9Y512 469 aa6.29□□□□□ -1.4
TRAPPC13-203ENST00000415825 NEFMP07197 916 aa6.28□□□□□ -1.4
TRAPPC13-203ENST00000415825 XRCC5P13010 732 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-203ENST00000415825 ZNF211Q13398 564 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC13-203ENST00000415825 ZC3H12AQ5D1E8 599 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-203ENST00000415825 GLYCTKQ8IVS8 523 aa6.28□□□□□ -1.4
TRAPPC13-203ENST00000415825 DNAJC25Q9H1X3 360 aa6.28□□□□□ -1.4
TRAPPC13-203ENST00000415825 ANO2Q9NQ90 1003 aa6.28□□□□□ -1.4
TRAPPC13-203ENST00000415825 NLRP2Q9NX02 1062 aa6.28□□□□□ -1.4
TRAPPC13-203ENST00000415825 PCDHGC5Q9Y5F6 944 aa6.28□□□□□ -1.4
TRAPPC13-203ENST00000415825 PPP1R15AO75807 674 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC13-203ENST00000415825 GLDCP23378 1020 aa6.27□□□□□ -1.41
TRAPPC13-203ENST00000415825 NKPD1Q17RQ9 610 aa6.27□□□□□ -1.41
TRAPPC13-203ENST00000415825 CDKAL1Q5VV42 579 aa6.27□□□□□ -1.41
TRAPPC13-203ENST00000415825 ERICH6BQ5W0A0 696 aa6.27□□□□□ -1.41
TRAPPC13-203ENST00000415825 CCDC74AQ96AQ1 378 aa6.27□□□□□ -1.41
TRAPPC13-203ENST00000415825 ZCCHC4Q9H5U6 513 aa6.27□□□□□ -1.41
TRAPPC13-203ENST00000415825 ARNTP27540 789 aa6.26□□□□□ -1.41
TRAPPC13-203ENST00000415825 FCGRTP55899 365 aa6.26□□□□□ -1.41
TRAPPC13-203ENST00000415825 B4GALNT3Q6L9W6 998 aa6.26□□□□□ -1.41
TRAPPC13-203ENST00000415825 ZNF746Q6NUN9 644 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC13-203ENST00000415825 DBX2Q6ZNG2 339 aa6.26□□□□□ -1.41
TRAPPC13-203ENST00000415825 MFSD4AQ8N468 514 aa6.26□□□□□ -1.41
TRAPPC13-203ENST00000415825 HSPA12BQ96MM6 686 aa6.26□□□□□ -1.41
TRAPPC13-203ENST00000415825 ALPK1Q96QP1 1244 aa6.26□□□□□ -1.41
TRAPPC13-203ENST00000415825 CSRNP1Q96S65 589 aa6.26□□□□□ -1.41
TRAPPC13-203ENST00000415825 ATP13A1Q9HD20 1204 aa6.26□□□□□ -1.41
TRAPPC13-203ENST00000415825 CD320Q9NPF0 282 aa6.26□□□□□ -1.41
TRAPPC13-203ENST00000415825 SMG5Q9UPR3 1016 aaKnown RBP6.26□□□□□ -1.41
TRAPPC13-203ENST00000415825 FANCGO15287 622 aa6.25□□□□□ -1.41
TRAPPC13-203ENST00000415825 MED14OSP0DP75 135 aa6.25□□□□□ -1.41
TRAPPC13-203ENST00000415825 FAAP100Q0VG06 881 aa6.25□□□□□ -1.41
TRAPPC13-203ENST00000415825 ORC1Q13415 861 aa6.25□□□□□ -1.41
TRAPPC13-203ENST00000415825 SFRP5Q5T4F7 317 aa6.25□□□□□ -1.41
TRAPPC13-203ENST00000415825 H3BS24 57 aa6.24□□□□□ -1.41
TRAPPC13-203ENST00000415825 ETV2O00321 342 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC13-203ENST00000415825 LINC00310P59036 64 aa6.24□□□□□ -1.41
TRAPPC13-203ENST00000415825 PPM1JQ5JR12 505 aa6.24□□□□□ -1.41
TRAPPC13-203ENST00000415825 TTC6Q86TZ1 520 aa6.24□□□□□ -1.41
TRAPPC13-203ENST00000415825 GPBAR1Q8TDU6 330 aa6.24□□□□□ -1.41
TRAPPC13-203ENST00000415825 MYLIPQ8WY64 445 aa6.24□□□□□ -1.41
TRAPPC13-203ENST00000415825 SYTL4Q96C24 671 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC13-203ENST00000415825 CITED4Q96RK1 184 aa6.24□□□□□ -1.41
TRAPPC13-203ENST00000415825 IRF2BPLQ9H1B7 796 aa6.24□□□□□ -1.41
TRAPPC13-203ENST00000415825 SLAMF8Q9P0V8 285 aa6.24□□□□□ -1.41
TRAPPC13-203ENST00000415825 AKAP2Q9Y2D5 859 aa6.24□□□□□ -1.41
TRAPPC13-203ENST00000415825 CSADQ9Y600 493 aa6.24□□□□□ -1.41
TRAPPC13-203ENST00000415825 H3BRB1 525 aa6.23□□□□□ -1.41
TRAPPC13-203ENST00000415825 EIF1AYO14602 144 aaKnown RBP6.23□□□□□ -1.41
TRAPPC13-203ENST00000415825 HOXA5P20719 270 aa6.23□□□□□ -1.41
TRAPPC13-203ENST00000415825 NME2P22392 152 aa6.23□□□□□ -1.41
TRAPPC13-203ENST00000415825 CYP7A1P22680 504 aa6.23□□□□□ -1.41
TRAPPC13-203ENST00000415825 THAP5Q7Z6K1 395 aa6.23□□□□□ -1.41
TRAPPC13-203ENST00000415825 ZNF507Q8TCN5 953 aa6.23□□□□□ -1.41
TRAPPC13-203ENST00000415825 ELMO3Q96BJ8 720 aa6.23□□□□□ -1.41
TRAPPC13-203ENST00000415825 BORCS6Q96GS4 357 aa6.23□□□□□ -1.41
TRAPPC13-203ENST00000415825 TUT1Q9H6E5 874 aaKnown RBP6.23□□□□□ -1.41
TRAPPC13-203ENST00000415825 PARD6AQ9NPB6 346 aa6.23□□□□□ -1.41
TRAPPC13-203ENST00000415825 EGFL7Q9UHF1 273 aa6.23□□□□□ -1.41
TRAPPC13-203ENST00000415825 LRIG2O94898 1065 aa6.22□□□□□ -1.41
TRAPPC13-203ENST00000415825 KRT1P04264 644 aa6.22□□□□□ -1.41
TRAPPC13-203ENST00000415825 GRM2Q14416 872 aa6.22□□□□□ -1.41
TRAPPC13-203ENST00000415825 TMEM132EQ6IEE7 984 aa6.22□□□□□ -1.41
TRAPPC13-203ENST00000415825 ARMCX6Q7L4S7 300 aa6.22□□□□□ -1.41
TRAPPC13-203ENST00000415825 FAM214BQ7L5A3 538 aa6.22□□□□□ -1.41
TRAPPC13-203ENST00000415825 PDZD3Q86UT5 571 aa6.22□□□□□ -1.41
TRAPPC13-203ENST00000415825 TMEM88BA6NKF7 163 aa6.21□□□□□ -1.42
TRAPPC13-203ENST00000415825 DCDC2CA8MYV0 355 aa6.21□□□□□ -1.42
TRAPPC13-203ENST00000415825 RFXAPO00287 272 aa6.21□□□□□ -1.42
TRAPPC13-203ENST00000415825 ICMTO60725 284 aa6.21□□□□□ -1.42
TRAPPC13-203ENST00000415825 SYN1P17600 705 aa6.21□□□□□ -1.42
TRAPPC13-203ENST00000415825 BMP7P18075 431 aa6.21□□□□□ -1.42
TRAPPC13-203ENST00000415825 LRRC14Q15048 493 aa6.21□□□□□ -1.42
TRAPPC13-203ENST00000415825 COX4I2Q96KJ9 171 aa6.21□□□□□ -1.42
TRAPPC13-203ENST00000415825 EOMESO95936 686 aa6.2□□□□□ -1.42
TRAPPC13-203ENST00000415825 C12orf40Q86WS4 652 aa6.2□□□□□ -1.42
TRAPPC13-203ENST00000415825 HK2P52789 917 aa6.19□□□□□ -1.42
TRAPPC13-203ENST00000415825 FGD1P98174 961 aa6.19□□□□□ -1.42
TRAPPC13-203ENST00000415825 ZNF385BQ569K4 471 aa6.19□□□□□ -1.42
TRAPPC13-203ENST00000415825 TCERG1LQ5VWI1 586 aa6.19□□□□□ -1.42
TRAPPC13-203ENST00000415825 C22orf34Q6ZV56 151 aa6.19□□□□□ -1.42
TRAPPC13-203ENST00000415825 TMEM151BQ8IW70 566 aa6.19□□□□□ -1.42
TRAPPC13-203ENST00000415825 UBE2FQ969M7 185 aa6.19□□□□□ -1.42
TRAPPC13-203ENST00000415825 MIPEPQ99797 713 aa6.19□□□□□ -1.42
TRAPPC13-203ENST00000415825 CEP44Q9C0F1 390 aa6.19□□□□□ -1.42
TRAPPC13-203ENST00000415825 NIF3L1Q9GZT8 377 aa6.19□□□□□ -1.42
TRAPPC13-203ENST00000415825 SEMA3GQ9NS98 782 aa6.19□□□□□ -1.42
TRAPPC13-203ENST00000415825 C19orf73Q9NVV2 129 aa6.19□□□□□ -1.42
TRAPPC13-203ENST00000415825 ZSWIM5Q9P217 1185 aa6.19□□□□□ -1.42
TRAPPC13-203ENST00000415825 TMEM59LQ9UK28 342 aa6.19□□□□□ -1.42
TRAPPC13-203ENST00000415825 PCDHA4Q9UN74 947 aa6.19□□□□□ -1.42
TRAPPC13-203ENST00000415825 FOXD2O60548 495 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC13-203ENST00000415825 TRIM37O94972 964 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms