RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 LMTK2Q8IWU2 1503 aa8.56□□□□□ -1.04
EPHA4-204ENST00000415749 ASXL1Q8IXJ9 1541 aa8.56□□□□□ -1.04
EPHA4-204ENST00000415749 ITPKAP23677 461 aa8.56□□□□□ -1.04
EPHA4-204ENST00000415749 GRIA4P48058 902 aa8.56□□□□□ -1.04
EPHA4-204ENST00000415749 AFF1P51825 1210 aaKnown RBP8.56□□□□□ -1.04
EPHA4-204ENST00000415749 TINF2Q9BSI4 451 aa8.56□□□□□ -1.04
EPHA4-204ENST00000415749 CAPN10Q9HC96 672 aa8.56□□□□□ -1.04
EPHA4-204ENST00000415749 PRKAG2Q9UGJ0 569 aa8.56□□□□□ -1.04
EPHA4-204ENST00000415749 ABCC5O15440 1437 aa8.55□□□□□ -1.04
EPHA4-204ENST00000415749 DCCP43146 1447 aa8.55□□□□□ -1.04
EPHA4-204ENST00000415749 MST1RQ04912 1400 aa8.55□□□□□ -1.04
EPHA4-204ENST00000415749 METTL12A8MUP2 240 aa8.55□□□□□ -1.04
EPHA4-204ENST00000415749 INSM1Q01101 510 aaPredicted RBP8.55□□□□□ -1.04
EPHA4-204ENST00000415749 GRIK5Q16478 980 aa8.55□□□□□ -1.04
EPHA4-204ENST00000415749 RPS26P11Q5JNZ5 115 aaPredicted RBP8.55□□□□□ -1.04
EPHA4-204ENST00000415749 WFDC8Q8IUA0 241 aa8.55□□□□□ -1.04
EPHA4-204ENST00000415749 IL22RA1Q8N6P7 574 aa8.55□□□□□ -1.04
EPHA4-204ENST00000415749 ZSCAN1Q8NBB4 408 aa8.55□□□□□ -1.04
EPHA4-204ENST00000415749 DHX38Q92620 1227 aaKnown RBP8.55□□□□□ -1.04
EPHA4-204ENST00000415749 RNF34Q969K3 372 aa8.55□□□□□ -1.04
EPHA4-204ENST00000415749 LNPKQ9C0E8 428 aa8.55□□□□□ -1.04
EPHA4-204ENST00000415749 SOX13Q9UN79 622 aa8.55□□□□□ -1.04
EPHA4-204ENST00000415749 AKAP2Q9Y2D5 859 aa8.55□□□□□ -1.04
EPHA4-204ENST00000415749 ATRNO75882 1429 aa8.54□□□□□ -1.04
EPHA4-204ENST00000415749 PTPRUQ92729 1446 aa8.54□□□□□ -1.04
EPHA4-204ENST00000415749 EIF4EBP3O60516 100 aaPredicted RBP8.54□□□□□ -1.04
EPHA4-204ENST00000415749 DGKGP49619 791 aa8.54□□□□□ -1.04
EPHA4-204ENST00000415749 SPRED3Q2MJR0 410 aa8.54□□□□□ -1.04
EPHA4-204ENST00000415749 FAM117BQ6P1L5 589 aa8.54□□□□□ -1.04
EPHA4-204ENST00000415749 HIRIP3Q9BW71 556 aaPredicted RBP8.54□□□□□ -1.04
EPHA4-204ENST00000415749 TGIF2Q9GZN2 237 aa8.54□□□□□ -1.04
EPHA4-204ENST00000415749 CLEC4MQ9H2X3 399 aaPredicted RBP8.54□□□□□ -1.04
EPHA4-204ENST00000415749 ZNF576Q9H609 170 aa8.54□□□□□ -1.04
EPHA4-204ENST00000415749 CCSER2Q9H7U1 834 aa8.54□□□□□ -1.04
EPHA4-204ENST00000415749 PPME1Q9Y570 386 aa8.54□□□□□ -1.04
EPHA4-204ENST00000415749 BLMP54132 1417 aaPredicted RBP8.54□□□□□ -1.04
EPHA4-204ENST00000415749 ANKRD30AQ9BXX3 1397 aa8.53□□□□□ -1.04
EPHA4-204ENST00000415749 ARHGEF15O94989 841 aa8.53□□□□□ -1.04
EPHA4-204ENST00000415749 ATP2B1P20020 1258 aa8.53□□□□□ -1.04
EPHA4-204ENST00000415749 ST13P50502 369 aaKnown RBP8.53□□□□□ -1.04
EPHA4-204ENST00000415749 FANCCQ00597 558 aa8.53□□□□□ -1.04
EPHA4-204ENST00000415749 TAF1CQ15572 869 aaPredicted RBP8.53□□□□□ -1.04
EPHA4-204ENST00000415749 MSL1Q68DK7 614 aa8.53□□□□□ -1.04
EPHA4-204ENST00000415749 NOP9Q86U38 636 aaKnown RBP8.53□□□□□ -1.04
EPHA4-204ENST00000415749 SLC43A3Q8NBI5 491 aa8.53□□□□□ -1.04
EPHA4-204ENST00000415749 C3orf58Q8NDZ4 430 aa8.53□□□□□ -1.04
EPHA4-204ENST00000415749 ANKRD24Q8TF21 1146 aa8.53□□□□□ -1.04
EPHA4-204ENST00000415749 ORAI2Q96SN7 254 aa8.53□□□□□ -1.04
EPHA4-204ENST00000415749 CEP44Q9C0F1 390 aa8.53□□□□□ -1.04
EPHA4-204ENST00000415749 TTF2Q9UNY4 1162 aaKnown RBP8.53□□□□□ -1.04
EPHA4-204ENST00000415749 PTCH1Q13635 1447 aa8.53□□□□□ -1.04
EPHA4-204ENST00000415749 H3BRJ5 948 aa8.52□□□□□ -1.05
EPHA4-204ENST00000415749 CTSHP09668 335 aa8.52□□□□□ -1.05
EPHA4-204ENST00000415749 GTF2F1P35269 517 aaKnown RBP eCLIP8.52□□□□□ -1.05
EPHA4-204ENST00000415749 C8orf86Q6ZUL3 223 aa8.52□□□□□ -1.05
EPHA4-204ENST00000415749 PODNQ7Z5L7 613 aa8.52□□□□□ -1.05
EPHA4-204ENST00000415749 DDX54Q8TDD1 881 aaKnown RBP8.52□□□□□ -1.05
EPHA4-204ENST00000415749 DCAF11Q8TEB1 546 aa8.52□□□□□ -1.05
EPHA4-204ENST00000415749 SRA1Q9HD15 236 aaKnown RBP8.52□□□□□ -1.05
EPHA4-204ENST00000415749 SH2B1Q9NRF2 756 aaPredicted RBP8.52□□□□□ -1.05
EPHA4-204ENST00000415749 METTL5Q9NRN9 209 aaKnown RBP8.52□□□□□ -1.05
EPHA4-204ENST00000415749 BCL9LQ86UU0 1499 aa8.51□□□□□ -1.05
EPHA4-204ENST00000415749 NHSL1Q5SYE7 1610 aa8.51□□□□□ -1.05
EPHA4-204ENST00000415749 SPDYE3A6NKU9 549 aa8.51□□□□□ -1.05
EPHA4-204ENST00000415749 YY1P25490 414 aa8.51□□□□□ -1.05
EPHA4-204ENST00000415749 ARL4DP49703 201 aa8.51□□□□□ -1.05
EPHA4-204ENST00000415749 PCDH1Q08174 1060 aa8.51□□□□□ -1.05
EPHA4-204ENST00000415749 IKBKEQ14164 716 aa8.51□□□□□ -1.05
EPHA4-204ENST00000415749 VN1R5Q7Z5H4 357 aa8.51□□□□□ -1.05
EPHA4-204ENST00000415749 MAP4K3Q8IVH8 894 aa8.51□□□□□ -1.05
EPHA4-204ENST00000415749 WNT8BQ93098 351 aa8.51□□□□□ -1.05
EPHA4-204ENST00000415749 ACBD3Q9H3P7 528 aa8.51□□□□□ -1.05
EPHA4-204ENST00000415749 MKL2Q9ULH7 1088 aa8.51□□□□□ -1.05
EPHA4-204ENST00000415749 MYO5BQ9ULV0 1848 aa8.51□□□□□ -1.05
EPHA4-204ENST00000415749 TMEM131LA2VDJ0 1609 aa8.51□□□□□ -1.05
EPHA4-204ENST00000415749 USP31Q70CQ4 1352 aa8.5□□□□□ -1.05
EPHA4-204ENST00000415749 NID1P14543 1247 aa8.5□□□□□ -1.05
EPHA4-204ENST00000415749 EPHA1P21709 976 aa8.5□□□□□ -1.05
EPHA4-204ENST00000415749 ZNF76P36508 570 aa8.5□□□□□ -1.05
EPHA4-204ENST00000415749 PPP2R3AQ06190 1150 aa8.5□□□□□ -1.05
EPHA4-204ENST00000415749 ZNF662Q6ZS27 426 aa8.5□□□□□ -1.05
EPHA4-204ENST00000415749 UNC5CLQ8IV45 518 aa8.5□□□□□ -1.05
EPHA4-204ENST00000415749 GPN3Q9UHW5 284 aaPredicted RBP8.5□□□□□ -1.05
EPHA4-204ENST00000415749 C1orf167Q5SNV9 1468 aa8.5□□□□□ -1.05
EPHA4-204ENST00000415749 RPRD2Q5VT52 1461 aaKnown RBP8.5□□□□□ -1.05
EPHA4-204ENST00000415749 TRPM2O94759 1503 aa8.49□□□□□ -1.05
EPHA4-204ENST00000415749 DAPK1P53355 1430 aa8.49□□□□□ -1.05
EPHA4-204ENST00000415749 GNB5O14775 395 aa8.49□□□□□ -1.05
EPHA4-204ENST00000415749 BAG6P46379 1132 aa8.49□□□□□ -1.05
EPHA4-204ENST00000415749 TNNI2P48788 182 aa8.49□□□□□ -1.05
EPHA4-204ENST00000415749 TRAPPC3LQ5T215 181 aa8.49□□□□□ -1.05
EPHA4-204ENST00000415749 MEI1Q5TIA1 1274 aa8.49□□□□□ -1.05
EPHA4-204ENST00000415749 DTWD1Q8N5C7 304 aa8.49□□□□□ -1.05
EPHA4-204ENST00000415749 TMA7Q9Y2S6 64 aaKnown RBP8.49□□□□□ -1.05
EPHA4-204ENST00000415749 METP08581 1390 aa8.48□□□□□ -1.05
EPHA4-204ENST00000415749 LRP5O75197 1615 aa8.48□□□□□ -1.05
EPHA4-204ENST00000415749 LINC01387J3KSC0 135 aa8.48□□□□□ -1.05
EPHA4-204ENST00000415749 EIF5BO60841 1220 aaKnown RBP8.48□□□□□ -1.05
EPHA4-204ENST00000415749 B3GALT4O96024 378 aa8.48□□□□□ -1.05
EPHA4-204ENST00000415749 ESRRAP11474 423 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms