RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 BEND6Q5SZJ8 279 aaPredicted RBP8.87□□□□□ -0.99
SIK3-203ENST00000415541 CPLX2Q6PUV4 134 aaKnown RBP8.87□□□□□ -0.99
SIK3-203ENST00000415541 SRGAP1Q7Z6B7 1085 aa8.87□□□□□ -0.99
SIK3-203ENST00000415541 KAT2BQ92831 832 aa8.87□□□□□ -0.99
SIK3-203ENST00000415541 FAXDC2Q96IV6 333 aa8.87□□□□□ -0.99
SIK3-203ENST00000415541 PLEKHA4Q9H4M7 779 aa8.87□□□□□ -0.99
SIK3-203ENST00000415541 JAG2Q9Y219 1238 aa8.87□□□□□ -0.99
SIK3-203ENST00000415541 NR1I2O75469 434 aa8.87□□□□□ -0.99
SIK3-203ENST00000415541 GBP2P32456 591 aaPredicted RBP8.87□□□□□ -0.99
SIK3-203ENST00000415541 ICA1Q05084 483 aa8.87□□□□□ -0.99
SIK3-203ENST00000415541 CASP8Q14790 479 aa8.87□□□□□ -0.99
SIK3-203ENST00000415541 CAVIN4Q5BKX8 364 aa8.87□□□□□ -0.99
SIK3-203ENST00000415541 CEP85LQ5SZL2 805 aa8.87□□□□□ -0.99
SIK3-203ENST00000415541 GIGYF2Q6Y7W6 1299 aaKnown RBP8.87□□□□□ -0.99
SIK3-203ENST00000415541 FAM76AQ8TAV0 307 aa8.87□□□□□ -0.99
SIK3-203ENST00000415541 QTRT2Q9H974 415 aaKnown RBP8.87□□□□□ -0.99
SIK3-203ENST00000415541 TFIP11Q9UBB9 837 aaKnown RBP8.87□□□□□ -0.99
SIK3-203ENST00000415541 GOLGA6L7A0A1B0GV03 622 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 MINDY4BA8MYZ0 360 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 SETSIPP0DME0 302 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 USP5P45974 858 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 CEBPZQ03701 1054 aaKnown RBP8.86□□□□□ -0.99
SIK3-203ENST00000415541 NAA25Q14CX7 972 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 C11orf57Q6ZUT1 292 aaPredicted RBP8.86□□□□□ -0.99
SIK3-203ENST00000415541 RAB11FIP4Q86YS3 637 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 NECAB1Q8N987 351 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 IRAK4Q9NWZ3 460 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 IFNKQ9P0W0 207 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 MAP3K15Q6ZN16 1313 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 TUBGCP6Q96RT7 1819 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 NCAPD2Q15021 1401 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 PXDNQ92626 1479 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 ARHGAP6O43182 974 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 RNF40O75150 1001 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 SASH1O94885 1247 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 MRPL12P52815 198 aaKnown RBP8.86□□□□□ -0.99
SIK3-203ENST00000415541 SF3B2Q13435 895 aaKnown RBP8.86□□□□□ -0.99
SIK3-203ENST00000415541 PDCD2Q16342 344 aaPredicted RBP8.86□□□□□ -0.99
SIK3-203ENST00000415541 AMOTL1Q8IY63 956 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 CCDC12Q8WUD4 166 aaPredicted RBP8.86□□□□□ -0.99
SIK3-203ENST00000415541 RSRC1Q96IZ7 334 aaKnown RBP8.86□□□□□ -0.99
SIK3-203ENST00000415541 WWC3Q9ULE0 1092 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 L1RE1Q9UN81 338 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 MEGF6O75095 1541 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 PDE8AO60658 829 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 WDHD1O75717 1129 aaPredicted RBP8.86□□□□□ -0.99
SIK3-203ENST00000415541 SLC4A8Q2Y0W8 1093 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 SLC9C2Q5TAH2 1124 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 TPTE2Q6XPS3 522 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 RPGRQ92834 1020 aaKnown RBP8.86□□□□□ -0.99
SIK3-203ENST00000415541 CRACR2AQ9BSW2 395 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 CENPHQ9H3R5 247 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 GREM2Q9H772 168 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 TFCP2L1Q9NZI6 479 aa8.86□□□□□ -0.99
SIK3-203ENST00000415541 ERICH2A1L162 156 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 MAP3K12Q12852 859 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 ISM2Q6H9L7 571 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 ARMCX5Q6P1M9 558 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 KCNV1Q6PIU1 500 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 TRIM65Q6PJ69 517 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 RUFY3Q7L099 469 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 XAGE2Q96GT9 111 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 XPO4Q9C0E2 1151 aaKnown RBP8.85□□□□□ -0.99
SIK3-203ENST00000415541 VIPAS39Q9H9C1 493 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 C6orf229H3BNL8 230 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 AKAP17AQ02040 695 aaKnown RBP8.85□□□□□ -0.99
SIK3-203ENST00000415541 PDIA6Q15084 440 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 TRAPPC3LQ5T215 181 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 CHST3Q7LGC8 479 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 CEP57Q86XR8 500 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 ZKSCAN4Q969J2 545 aaPredicted RBP8.85□□□□□ -0.99
SIK3-203ENST00000415541 SDF4Q9BRK5 362 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 ABCB6Q9NP58 842 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 U3KPZ7 1027 aaPredicted RBP8.85□□□□□ -0.99
SIK3-203ENST00000415541 RGPD8O14715 1765 aaPredicted RBP8.85□□□□□ -0.99
SIK3-203ENST00000415541 ANKRD33BA6NCL7 494 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 PTPN12Q05209 780 aaKnown RBP8.85□□□□□ -0.99
SIK3-203ENST00000415541 IMMTQ16891 758 aaKnown RBP8.85□□□□□ -0.99
SIK3-203ENST00000415541 MCMDC2Q4G0Z9 681 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 ZBTB38Q8NAP3 1195 aaPredicted RBP8.85□□□□□ -0.99
SIK3-203ENST00000415541 BCAS4Q8TDM0 211 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 NACAP1Q9BZK3 213 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 DBNLQ9UJU6 430 aaKnown RBP8.85□□□□□ -0.99
SIK3-203ENST00000415541 RAB21Q9UL25 225 aa8.85□□□□□ -0.99
SIK3-203ENST00000415541 CCT2P78371 535 aaKnown RBP8.84□□□□□ -0.99
SIK3-203ENST00000415541 POLA2Q14181 598 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 KRT32Q14532 448 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 RPUSD2Q8IZ73 545 aaKnown RBP8.84□□□□□ -0.99
SIK3-203ENST00000415541 TTC14Q96N46 770 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 SEC62Q99442 399 aaKnown RBP8.84□□□□□ -0.99
SIK3-203ENST00000415541 SUDS3Q9H7L9 328 aaPredicted RBP8.84□□□□□ -0.99
SIK3-203ENST00000415541 ZSWIM4Q9H7M6 989 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 COPRSQ9NQ92 184 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 BATF3Q9NR55 127 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 PPP2R2CQ9Y2T4 447 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 SNX14Q9Y5W7 946 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 N4BP1O75113 896 aaKnown RBP8.84□□□□□ -0.99
SIK3-203ENST00000415541 SLC8A1P32418 973 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 DCCP43146 1447 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 ANKRD1Q15327 319 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms