RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 CHMLP26374 656 aa23.35■■□□□ 1.33
AP1S3-205ENST00000415298 QSER1Q2KHR3 1735 aa23.35■■□□□ 1.33
AP1S3-205ENST00000415298 CHD1LQ86WJ1 897 aa23.35■■□□□ 1.33
AP1S3-205ENST00000415298 ANKRD18AQ8IVF6 992 aa23.35■■□□□ 1.33
AP1S3-205ENST00000415298 TMEM87AQ8NBN3 555 aa23.35■■□□□ 1.33
AP1S3-205ENST00000415298 LRRN4CLQ8ND94 238 aa23.35■■□□□ 1.33
AP1S3-205ENST00000415298 RPUSD2Q8IZ73 545 aaKnown RBP23.34■■□□□ 1.33
AP1S3-205ENST00000415298 MICAL1Q8TDZ2 1067 aa23.34■■□□□ 1.33
AP1S3-205ENST00000415298 NLRP3Q96P20 1036 aa23.34■■□□□ 1.33
AP1S3-205ENST00000415298 SASH1O94885 1247 aa23.34■■□□□ 1.33
AP1S3-205ENST00000415298 CCDC158Q5M9N0 1113 aa23.34■■□□□ 1.33
AP1S3-205ENST00000415298 DRAXINQ8NBI3 349 aaPredicted RBP23.34■■□□□ 1.33
AP1S3-205ENST00000415298 KCND1Q9NSA2 647 aa23.34■■□□□ 1.33
AP1S3-205ENST00000415298 PARP3Q9Y6F1 533 aa23.34■■□□□ 1.33
AP1S3-205ENST00000415298 COL4A1P02462 1669 aa23.34■■□□□ 1.33
AP1S3-205ENST00000415298 EME2A4GXA9 379 aaPredicted RBP23.33■■□□□ 1.33
AP1S3-205ENST00000415298 RDXP35241 583 aaKnown RBP23.33■■□□□ 1.33
AP1S3-205ENST00000415298 OTUD7AQ8TE49 926 aaPredicted RBP23.33■■□□□ 1.33
AP1S3-205ENST00000415298 H3BQF6 201 aa23.32■■□□□ 1.32
AP1S3-205ENST00000415298 G3BP1Q13283 466 aaKnown RBP eCLIP23.32■■□□□ 1.32
AP1S3-205ENST00000415298 PREPLQ4J6C6 727 aaPredicted RBP23.32■■□□□ 1.32
AP1S3-205ENST00000415298 FBXW10Q5XX13 1052 aa23.32■■□□□ 1.32
AP1S3-205ENST00000415298 RHPN1Q8TCX5 695 aa23.32■■□□□ 1.32
AP1S3-205ENST00000415298 TNRC6CQ9HCJ0 1690 aaKnown RBP23.32■■□□□ 1.32
AP1S3-205ENST00000415298 SF3B3Q15393 1217 aaKnown RBP23.32■■□□□ 1.32
AP1S3-205ENST00000415298 CCDC152Q4G0S7 254 aa23.32■■□□□ 1.32
AP1S3-205ENST00000415298 PLA2G4DQ86XP0 818 aa23.32■■□□□ 1.32
AP1S3-205ENST00000415298 FAM200AQ8TCP9 573 aa23.32■■□□□ 1.32
AP1S3-205ENST00000415298 TMX4Q9H1E5 349 aaPredicted RBP23.32■■□□□ 1.32
AP1S3-205ENST00000415298 GDPD2Q9HCC8 539 aa23.32■■□□□ 1.32
AP1S3-205ENST00000415298 ATF5Q9Y2D1 282 aaPredicted RBP23.32■■□□□ 1.32
AP1S3-205ENST00000415298 ATG9AQ7Z3C6 839 aa23.31■■□□□ 1.32
AP1S3-205ENST00000415298 LRRCC1Q9C099 1032 aa23.31■■□□□ 1.32
AP1S3-205ENST00000415298 CHCHD3Q9NX63 227 aaKnown RBP23.31■■□□□ 1.32
AP1S3-205ENST00000415298 CASZ1Q86V15 1759 aa23.31■■□□□ 1.32
AP1S3-205ENST00000415298 ZNF75DP51815 510 aa23.31■■□□□ 1.32
AP1S3-205ENST00000415298 VPS18Q9P253 973 aa23.31■■□□□ 1.32
AP1S3-205ENST00000415298 ODF2LQ9ULJ1 636 aa23.31■■□□□ 1.32
AP1S3-205ENST00000415298 LAMB2P55268 1798 aa23.3■■□□□ 1.32
AP1S3-205ENST00000415298 CD151P48509 253 aa23.3■■□□□ 1.32
AP1S3-205ENST00000415298 LIG3P49916 1009 aa23.3■■□□□ 1.32
AP1S3-205ENST00000415298 NFXL1Q6ZNB6 911 aa23.3■■□□□ 1.32
AP1S3-205ENST00000415298 ZNF232Q9UNY5 417 aa23.3■■□□□ 1.32
AP1S3-205ENST00000415298 CCDC192P0DO97 292 aa23.3■■□□□ 1.32
AP1S3-205ENST00000415298 GIMAP6Q6P9H5 292 aa23.3■■□□□ 1.32
AP1S3-205ENST00000415298 LRRC8AQ8IWT6 810 aa23.3■■□□□ 1.32
AP1S3-205ENST00000415298 CCAR2Q8N163 923 aaKnown RBP23.3■■□□□ 1.32
AP1S3-205ENST00000415298 FUT8Q9BYC5 575 aa23.3■■□□□ 1.32
AP1S3-205ENST00000415298 ARFGAP3Q9NP61 516 aa23.3■■□□□ 1.32
AP1S3-205ENST00000415298 A0A1B0GUA9 196 aa23.29■■□□□ 1.32
AP1S3-205ENST00000415298 PECAM1P16284 738 aaPredicted RBP23.29■■□□□ 1.32
AP1S3-205ENST00000415298 POLD1P28340 1107 aa23.29■■□□□ 1.32
AP1S3-205ENST00000415298 LDHAL6AQ6ZMR3 332 aa23.29■■□□□ 1.32
AP1S3-205ENST00000415298 SLC51AQ86UW1 340 aa23.29■■□□□ 1.32
AP1S3-205ENST00000415298 CELF1Q92879 486 aaKnown RBP23.29■■□□□ 1.32
AP1S3-205ENST00000415298 CABS1Q96KC9 395 aa23.29■■□□□ 1.32
AP1S3-205ENST00000415298 CHUKO15111 745 aa23.28■■□□□ 1.32
AP1S3-205ENST00000415298 CDC45O75419 566 aa23.28■■□□□ 1.32
AP1S3-205ENST00000415298 ECEL1O95672 775 aa23.28■■□□□ 1.32
AP1S3-205ENST00000415298 EYA2O00167 538 aa23.28■■□□□ 1.32
AP1S3-205ENST00000415298 RAB11FIP3O75154 756 aa23.28■■□□□ 1.32
AP1S3-205ENST00000415298 PRPHP41219 470 aa23.28■■□□□ 1.32
AP1S3-205ENST00000415298 TFCP2Q12800 502 aa23.28■■□□□ 1.32
AP1S3-205ENST00000415298 UBE2HP62256 183 aa23.27■■□□□ 1.32
AP1S3-205ENST00000415298 ZKSCAN4Q969J2 545 aaPredicted RBP23.27■■□□□ 1.32
AP1S3-205ENST00000415298 TRIM5Q9C035 493 aa23.27■■□□□ 1.32
AP1S3-205ENST00000415298 GCKP35557 465 aa23.27■■□□□ 1.32
AP1S3-205ENST00000415298 SLC16A10Q8TF71 515 aa23.27■■□□□ 1.32
AP1S3-205ENST00000415298 PCDHGA4Q9Y5G9 962 aa23.27■■□□□ 1.32
AP1S3-205ENST00000415298 ECM2O94769 699 aaPredicted RBP23.26■■□□□ 1.31
AP1S3-205ENST00000415298 SKILP12757 684 aa23.26■■□□□ 1.31
AP1S3-205ENST00000415298 HSP90AB4PQ58FF6 505 aa23.26■■□□□ 1.31
AP1S3-205ENST00000415298 TUBB4AP04350 444 aa23.26■■□□□ 1.31
AP1S3-205ENST00000415298 POTEDQ86YR6 584 aa23.26■■□□□ 1.31
AP1S3-205ENST00000415298 CRACR2AQ9BSW2 395 aa23.26■■□□□ 1.31
AP1S3-205ENST00000415298 RIPOR2Q9Y4F9 1068 aa23.26■■□□□ 1.31
AP1S3-205ENST00000415298 TSHZ3Q63HK5 1081 aa23.25■■□□□ 1.31
AP1S3-205ENST00000415298 CNNM1Q9NRU3 951 aa23.25■■□□□ 1.31
AP1S3-205ENST00000415298 TRMT1Q9NXH9 659 aaKnown RBP23.25■■□□□ 1.31
AP1S3-205ENST00000415298 NRXN2Q9P2S2 1712 aa23.25■■□□□ 1.31
AP1S3-205ENST00000415298 EFCAB8A8MWE9 144 aa23.25■■□□□ 1.31
AP1S3-205ENST00000415298 CDC25BP30305 580 aa23.25■■□□□ 1.31
AP1S3-205ENST00000415298 HELBQ8NG08 1087 aaPredicted RBP23.25■■□□□ 1.31
AP1S3-205ENST00000415298 AKAP2Q9Y2D5 859 aa23.25■■□□□ 1.31
AP1S3-205ENST00000415298 ANKRD31Q8N7Z5 1873 aa23.25■■□□□ 1.31
AP1S3-205ENST00000415298 SNW1Q13573 536 aaKnown RBP23.24■■□□□ 1.31
AP1S3-205ENST00000415298 ZRSR2Q15696 482 aaKnown RBP23.24■■□□□ 1.31
AP1S3-205ENST00000415298 CCDC144BQ3MJ40 725 aa23.24■■□□□ 1.31
AP1S3-205ENST00000415298 CCDC144CPQ8IYA2 1237 aa23.24■■□□□ 1.31
AP1S3-205ENST00000415298 EAF2Q96CJ1 260 aaPredicted RBP23.24■■□□□ 1.31
AP1S3-205ENST00000415298 BRIP1Q9BX63 1249 aa23.24■■□□□ 1.31
AP1S3-205ENST00000415298 TADA3O75528 432 aa23.24■■□□□ 1.31
AP1S3-205ENST00000415298 CRY2Q49AN0 593 aa23.24■■□□□ 1.31
AP1S3-205ENST00000415298 WLSQ5T9L3 541 aa23.24■■□□□ 1.31
AP1S3-205ENST00000415298 IQCA1Q86XH1 822 aa23.24■■□□□ 1.31
AP1S3-205ENST00000415298 PARD3BQ8TEW8 1205 aa23.24■■□□□ 1.31
AP1S3-205ENST00000415298 MPHOSPH8Q99549 860 aa23.24■■□□□ 1.31
AP1S3-205ENST00000415298 KIF9Q9HAQ2 790 aa23.24■■□□□ 1.31
AP1S3-205ENST00000415298 SNAP23O00161 211 aa23.23■■□□□ 1.31
AP1S3-205ENST00000415298 ERC2O15083 957 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms