RNA–Protein interactions for RNA: ENST00000415251.6

PHTF2-204, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 1,738 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-204ENST00000415251 DDX60LQ5H9U9 1706 aaKnown RBP16.33■□□□□ 0.2
PHTF2-204ENST00000415251 ZNF213O14771 459 aa16.33■□□□□ 0.2
PHTF2-204ENST00000415251 PRDM1O75626 825 aa16.33■□□□□ 0.2
PHTF2-204ENST00000415251 HLA-DOAP06340 250 aa16.33■□□□□ 0.2
PHTF2-204ENST00000415251 CREB3L3Q68CJ9 461 aa16.33■□□□□ 0.2
PHTF2-204ENST00000415251 RASEFQ8IZ41 740 aa16.33■□□□□ 0.2
PHTF2-204ENST00000415251 NKX2-3Q8TAU0 364 aa16.33■□□□□ 0.2
PHTF2-204ENST00000415251 CTNNA3Q9UI47 895 aa16.33■□□□□ 0.2
PHTF2-204ENST00000415251 SERPINB13Q9UIV8 391 aa16.33■□□□□ 0.2
PHTF2-204ENST00000415251 ZMYM6O95789 1325 aa16.32■□□□□ 0.2
PHTF2-204ENST00000415251 SIPA1L1O43166 1804 aa16.32■□□□□ 0.2
PHTF2-204ENST00000415251 SLC27A2O14975 620 aa16.32■□□□□ 0.2
PHTF2-204ENST00000415251 TOMM70O94826 608 aa16.32■□□□□ 0.2
PHTF2-204ENST00000415251 GABPAQ06546 454 aa16.32■□□□□ 0.2
PHTF2-204ENST00000415251 IMMTQ16891 758 aaKnown RBP16.32■□□□□ 0.2
PHTF2-204ENST00000415251 TBC1D10CQ8IV04 446 aa16.32■□□□□ 0.2
PHTF2-204ENST00000415251 AMOTL1Q8IY63 956 aa16.32■□□□□ 0.2
PHTF2-204ENST00000415251 ZNF408Q9H9D4 720 aa16.32■□□□□ 0.2
PHTF2-204ENST00000415251 PPP2R3BQ9Y5P8 575 aa16.32■□□□□ 0.2
PHTF2-204ENST00000415251 COL9A3Q14050 684 aaPredicted RBP16.31■□□□□ 0.2
PHTF2-204ENST00000415251 RRP1BQ14684 758 aaKnown RBP16.31■□□□□ 0.2
PHTF2-204ENST00000415251 MOB2Q70IA6 237 aa16.31■□□□□ 0.2
PHTF2-204ENST00000415251 FOXP4Q8IVH2 680 aaPredicted RBP16.31■□□□□ 0.2
PHTF2-204ENST00000415251 CRACR2BQ8N4Y2 399 aaPredicted RBP16.31■□□□□ 0.2
PHTF2-204ENST00000415251 SSC5DA1L4H1 1573 aa16.31■□□□□ 0.2
PHTF2-204ENST00000415251 HSPA4P34932 840 aa16.31■□□□□ 0.2
PHTF2-204ENST00000415251 CDK8P49336 464 aa16.31■□□□□ 0.2
PHTF2-204ENST00000415251 SUPT20HL1Q3ZLR7 823 aa16.31■□□□□ 0.2
PHTF2-204ENST00000415251 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.31■□□□□ 0.2
PHTF2-204ENST00000415251 ANAPC4Q9UJX5 808 aa16.31■□□□□ 0.2
PHTF2-204ENST00000415251 COL2A1P02458 1487 aaPredicted RBP16.3■□□□□ 0.2
PHTF2-204ENST00000415251 SHROOM1Q2M3G4 852 aaPredicted RBP16.3■□□□□ 0.2
PHTF2-204ENST00000415251 STOX1Q6ZVD7 989 aa16.3■□□□□ 0.2
PHTF2-204ENST00000415251 C16orf86Q6ZW13 317 aa16.3■□□□□ 0.2
PHTF2-204ENST00000415251 METTL16Q86W50 562 aaKnown RBP16.3■□□□□ 0.2
PHTF2-204ENST00000415251 SMC1BQ8NDV3 1235 aa16.3■□□□□ 0.2
PHTF2-204ENST00000415251 USP2O75604 605 aaPredicted RBP16.29■□□□□ 0.2
PHTF2-204ENST00000415251 SHMT1P34896 483 aa16.29■□□□□ 0.2
PHTF2-204ENST00000415251 MAP3K10Q02779 954 aa16.29■□□□□ 0.2
PHTF2-204ENST00000415251 CST9Q5W186 159 aa16.29■□□□□ 0.2
PHTF2-204ENST00000415251 EHD4Q9H223 541 aa16.29■□□□□ 0.2
PHTF2-204ENST00000415251 PHF20L1A8MW92 1017 aa16.28■□□□□ 0.2
PHTF2-204ENST00000415251 TBC1D12O60347 775 aa16.28■□□□□ 0.2
PHTF2-204ENST00000415251 CELF2O95319 508 aaKnown RBP16.28■□□□□ 0.2
PHTF2-204ENST00000415251 JAG1P78504 1218 aa16.28■□□□□ 0.2
PHTF2-204ENST00000415251 ADCK5Q3MIX3 580 aa16.28■□□□□ 0.2
PHTF2-204ENST00000415251 RRP12Q5JTH9 1297 aaKnown RBP16.28■□□□□ 0.2
PHTF2-204ENST00000415251 AKNAD1Q5T1N1 836 aa16.28■□□□□ 0.2
PHTF2-204ENST00000415251 MFSD6Q6ZSS7 791 aa16.28■□□□□ 0.2
PHTF2-204ENST00000415251 RBM46Q8TBY0 533 aaKnown RBP16.28■□□□□ 0.2
PHTF2-204ENST00000415251 MKNK2Q9HBH9 465 aa16.28■□□□□ 0.2
PHTF2-204ENST00000415251 TOMM22Q9NS69 142 aa16.28■□□□□ 0.2
PHTF2-204ENST00000415251 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.28■□□□□ 0.2
PHTF2-204ENST00000415251 SNX14Q9Y5W7 946 aa16.28■□□□□ 0.2
PHTF2-204ENST00000415251 NEDD4P46934 1319 aa16.28■□□□□ 0.2
PHTF2-204ENST00000415251 E7EWF7 191 aa16.28■□□□□ 0.2
PHTF2-204ENST00000415251 TRIM34Q9BYJ4 488 aa16.28■□□□□ 0.2
PHTF2-204ENST00000415251 HERC5Q9UII4 1024 aaKnown RBP16.28■□□□□ 0.2
PHTF2-204ENST00000415251 LAMB1P07942 1786 aa16.27■□□□□ 0.2
PHTF2-204ENST00000415251 ROBO3Q96MS0 1386 aa16.27■□□□□ 0.2
PHTF2-204ENST00000415251 EPB41L2O43491 1005 aaKnown RBP16.27■□□□□ 0.19
PHTF2-204ENST00000415251 GDF11O95390 407 aa16.27■□□□□ 0.19
PHTF2-204ENST00000415251 SLC3A2P08195 630 aaKnown RBP16.27■□□□□ 0.19
PHTF2-204ENST00000415251 FGRP09769 529 aa16.27■□□□□ 0.19
PHTF2-204ENST00000415251 INPP5BP32019 993 aa16.27■□□□□ 0.19
PHTF2-204ENST00000415251 PDE4BQ07343 736 aa16.27■□□□□ 0.19
PHTF2-204ENST00000415251 TTLL12Q14166 644 aaPredicted RBP16.27■□□□□ 0.19
PHTF2-204ENST00000415251 FAM47AQ5JRC9 791 aa16.27■□□□□ 0.19
PHTF2-204ENST00000415251 RNF20Q5VTR2 975 aa16.27■□□□□ 0.19
PHTF2-204ENST00000415251 TATDN1Q6P1N9 297 aa16.27■□□□□ 0.19
PHTF2-204ENST00000415251 STAG1Q8WVM7 1258 aa16.27■□□□□ 0.19
PHTF2-204ENST00000415251 KCNB2Q92953 911 aa16.27■□□□□ 0.19
PHTF2-204ENST00000415251 ZKSCAN4Q969J2 545 aaPredicted RBP16.27■□□□□ 0.19
PHTF2-204ENST00000415251 KLRG1Q96E93 195 aa16.27■□□□□ 0.19
PHTF2-204ENST00000415251 C22orf23Q9BZE7 217 aa16.27■□□□□ 0.19
PHTF2-204ENST00000415251 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.27■□□□□ 0.19
PHTF2-204ENST00000415251 ANGEL1Q9UNK9 670 aaKnown RBP16.27■□□□□ 0.19
PHTF2-204ENST00000415251 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.27■□□□□ 0.19
PHTF2-204ENST00000415251 PASKQ96RG2 1323 aa16.27■□□□□ 0.19
PHTF2-204ENST00000415251 B4E1Z4 1266 aa16.26■□□□□ 0.19
PHTF2-204ENST00000415251 UBE2Q2LH0YL09 131 aa16.26■□□□□ 0.19
PHTF2-204ENST00000415251 PPP1R12BO60237 982 aaPredicted RBP16.26■□□□□ 0.19
PHTF2-204ENST00000415251 RASA1P20936 1047 aa16.26■□□□□ 0.19
PHTF2-204ENST00000415251 NF2P35240 595 aa16.26■□□□□ 0.19
PHTF2-204ENST00000415251 DCAF15Q66K64 600 aa16.26■□□□□ 0.19
PHTF2-204ENST00000415251 WRNIP1Q96S55 665 aa16.26■□□□□ 0.19
PHTF2-204ENST00000415251 RANBP6O60518 1105 aaKnown RBP16.25■□□□□ 0.19
PHTF2-204ENST00000415251 AKR1B1P15121 316 aa16.25■□□□□ 0.19
PHTF2-204ENST00000415251 ZKSCAN1P17029 563 aaPredicted RBP16.25■□□□□ 0.19
PHTF2-204ENST00000415251 CERKLQ49MI3 558 aaPredicted RBP16.25■□□□□ 0.19
PHTF2-204ENST00000415251 ZNF341Q9BYN7 854 aa16.25■□□□□ 0.19
PHTF2-204ENST00000415251 SWAP70Q9UH65 585 aa16.25■□□□□ 0.19
PHTF2-204ENST00000415251 LAMA4Q16363 1823 aa16.25■□□□□ 0.19
PHTF2-204ENST00000415251 EIF5BO60841 1220 aaKnown RBP16.25■□□□□ 0.19
PHTF2-204ENST00000415251 CPA1P15085 419 aa16.25■□□□□ 0.19
PHTF2-204ENST00000415251 MCCP23508 829 aa16.25■□□□□ 0.19
PHTF2-204ENST00000415251 TSGA10IPQ3SY00 556 aa16.25■□□□□ 0.19
PHTF2-204ENST00000415251 CHST3Q7LGC8 479 aa16.25■□□□□ 0.19
PHTF2-204ENST00000415251 ZNF444Q8N0Y2 327 aaPredicted RBP16.25■□□□□ 0.19
PHTF2-204ENST00000415251 HOOK2Q96ED9 719 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms