RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 WTAPQ15007 396 aa13.12□□□□□ -0.31
SCN4B-202ENST00000415030 RRAGBQ5VZM2 374 aa13.12□□□□□ -0.31
SCN4B-202ENST00000415030 DIS3L2Q8IYB7 885 aaKnown RBP13.12□□□□□ -0.31
SCN4B-202ENST00000415030 TRMT44Q8IYL2 757 aaKnown RBP13.12□□□□□ -0.31
SCN4B-202ENST00000415030 PALLDQ8WX93 1383 aa13.12□□□□□ -0.31
SCN4B-202ENST00000415030 SLC9C2Q5TAH2 1124 aa13.12□□□□□ -0.31
SCN4B-202ENST00000415030 RESP18Q5W5W9 173 aa13.12□□□□□ -0.31
SCN4B-202ENST00000415030 MICALL1Q8N3F8 863 aa13.12□□□□□ -0.31
SCN4B-202ENST00000415030 SERTAD1Q9UHV2 236 aa13.12□□□□□ -0.31
SCN4B-202ENST00000415030 ZRANB2O95218 330 aaKnown RBP eCLIP13.12□□□□□ -0.31
SCN4B-202ENST00000415030 UQCRFS1P1P0C7P4 283 aa13.12□□□□□ -0.31
SCN4B-202ENST00000415030 SPATA1Q5VX52 437 aa13.12□□□□□ -0.31
SCN4B-202ENST00000415030 NOSTRINQ8IVI9 506 aa13.12□□□□□ -0.31
SCN4B-202ENST00000415030 ZCCHC17Q9NP64 241 aaKnown RBP13.12□□□□□ -0.31
SCN4B-202ENST00000415030 WDR19Q8NEZ3 1342 aa13.12□□□□□ -0.31
SCN4B-202ENST00000415030 ZNF335Q9H4Z2 1342 aaPredicted RBP13.12□□□□□ -0.31
SCN4B-202ENST00000415030 PAFAH1B1P43034 410 aa13.11□□□□□ -0.31
SCN4B-202ENST00000415030 REXO1L1PQ8IX06 675 aa13.11□□□□□ -0.31
SCN4B-202ENST00000415030 CCDC82Q8N4S0 544 aa13.11□□□□□ -0.31
SCN4B-202ENST00000415030 CLIC6Q96NY7 704 aa13.11□□□□□ -0.31
SCN4B-202ENST00000415030 GUCA1BQ9UMX6 200 aa13.11□□□□□ -0.31
SCN4B-202ENST00000415030 TMEM94Q12767 1356 aa13.11□□□□□ -0.31
SCN4B-202ENST00000415030 GOLGA6L10A6NI86 522 aa13.11□□□□□ -0.31
SCN4B-202ENST00000415030 DEXIO95424 95 aa13.11□□□□□ -0.31
SCN4B-202ENST00000415030 TBC1D8O95759 1140 aa13.11□□□□□ -0.31
SCN4B-202ENST00000415030 IL2RBP14784 551 aa13.11□□□□□ -0.31
SCN4B-202ENST00000415030 RXRAP19793 462 aa13.11□□□□□ -0.31
SCN4B-202ENST00000415030 VWA3AA6NCI4 1184 aa13.11□□□□□ -0.31
SCN4B-202ENST00000415030 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.11□□□□□ -0.31
SCN4B-202ENST00000415030 PHKBQ93100 1093 aa13.11□□□□□ -0.31
SCN4B-202ENST00000415030 DCAF5Q96JK2 942 aa13.11□□□□□ -0.31
SCN4B-202ENST00000415030 ZBTB3Q9H5J0 574 aa13.11□□□□□ -0.31
SCN4B-202ENST00000415030 RNF216Q9NWF9 866 aaPredicted RBP13.11□□□□□ -0.31
SCN4B-202ENST00000415030 MAN1B1Q9UKM7 699 aa13.11□□□□□ -0.31
SCN4B-202ENST00000415030 MON2Q7Z3U7 1717 aa13.11□□□□□ -0.31
SCN4B-202ENST00000415030 TMEM232C9JQI7 657 aa13.1□□□□□ -0.31
SCN4B-202ENST00000415030 EPHA10Q5JZY3 1008 aa13.1□□□□□ -0.31
SCN4B-202ENST00000415030 ARHGEF25Q86VW2 580 aa13.1□□□□□ -0.31
SCN4B-202ENST00000415030 AGXT2Q9BYV1 514 aa13.1□□□□□ -0.31
SCN4B-202ENST00000415030 FAN1Q9Y2M0 1017 aa13.1□□□□□ -0.31
SCN4B-202ENST00000415030 MAGEA9P43362 315 aa13.1□□□□□ -0.31
SCN4B-202ENST00000415030 WDR24Q96S15 920 aa13.1□□□□□ -0.31
SCN4B-202ENST00000415030 JADE2Q9NQC1 790 aa13.1□□□□□ -0.31
SCN4B-202ENST00000415030 MYO6Q9UM54 1294 aa13.1□□□□□ -0.31
SCN4B-202ENST00000415030 LUC7L2Q9Y383 392 aaKnown RBP13.1□□□□□ -0.31
SCN4B-202ENST00000415030 ST5P78524 1137 aa13.1□□□□□ -0.31
SCN4B-202ENST00000415030 SPECC1Q5M775 1068 aa13.1□□□□□ -0.31
SCN4B-202ENST00000415030 TOGARAM2Q6ZUX3 1019 aa13.1□□□□□ -0.31
SCN4B-202ENST00000415030 SRLQ86TD4 932 aa13.1□□□□□ -0.31
SCN4B-202ENST00000415030 DPF2Q92785 391 aa13.1□□□□□ -0.31
SCN4B-202ENST00000415030 XAGE2Q96GT9 111 aa13.1□□□□□ -0.31
SCN4B-202ENST00000415030 ZNF496Q96IT1 587 aaPredicted RBP13.1□□□□□ -0.31
SCN4B-202ENST00000415030 ZNF219Q9P2Y4 722 aaPredicted RBP13.1□□□□□ -0.31
SCN4B-202ENST00000415030 FBXO3Q9UK99 471 aa13.1□□□□□ -0.31
SCN4B-202ENST00000415030 PRAMEF22A3QJZ6 481 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 B4E1Z4 1266 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 MNAT1P51948 309 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 LONRF3Q496Y0 759 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 LDHAL6AQ6ZMR3 332 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 IQUBQ8NA54 791 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 MYO5BQ9ULV0 1848 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 C3P01024 1663 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 CIAO1O76071 339 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 CASP8Q14790 479 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 FKBP15Q5T1M5 1219 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 CCDC91Q7Z6B0 441 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 POTEDQ86YR6 584 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 HNRNPLLQ8WVV9 542 aaKnown RBP13.09□□□□□ -0.31
SCN4B-202ENST00000415030 ALS2CR12Q96Q35 445 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 AGLP35573 1532 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 HSF2BPO75031 334 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 GPTP24298 496 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 NCAPHQ15003 741 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 SLC35F6Q8N357 371 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 ANKRD18BA2A2Z9 1011 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 M0R2C6 588 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 KRT9P35527 623 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 CCDC122Q5T0U0 273 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 FAM114A1Q8IWE2 563 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 EFCAB13Q8IY85 973 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.09□□□□□ -0.31
SCN4B-202ENST00000415030 USP21Q9UK80 565 aa13.09□□□□□ -0.31
SCN4B-202ENST00000415030 CTDP1Q9Y5B0 961 aaPredicted RBP13.09□□□□□ -0.31
SCN4B-202ENST00000415030 FDPSP14324 419 aaKnown RBP13.08□□□□□ -0.32
SCN4B-202ENST00000415030 RFC4P35249 363 aa13.08□□□□□ -0.32
SCN4B-202ENST00000415030 UBXN1Q04323 297 aa13.08□□□□□ -0.32
SCN4B-202ENST00000415030 RABL6Q3YEC7 729 aaPredicted RBP13.08□□□□□ -0.32
SCN4B-202ENST00000415030 TRIM65Q6PJ69 517 aa13.08□□□□□ -0.32
SCN4B-202ENST00000415030 EPC1Q9H2F5 836 aa13.08□□□□□ -0.32
SCN4B-202ENST00000415030 ABCB6Q9NP58 842 aa13.08□□□□□ -0.32
SCN4B-202ENST00000415030 CLSTN1O94985 981 aa13.08□□□□□ -0.32
SCN4B-202ENST00000415030 FAM98CQ17RN3 349 aaKnown RBP13.08□□□□□ -0.32
SCN4B-202ENST00000415030 OSBP2Q969R2 916 aa13.08□□□□□ -0.32
SCN4B-202ENST00000415030 FERMT2Q96AC1 680 aa13.08□□□□□ -0.32
SCN4B-202ENST00000415030 HAUS4Q9H6D7 363 aa13.08□□□□□ -0.32
SCN4B-202ENST00000415030 ATG3Q9NT62 314 aa13.08□□□□□ -0.32
SCN4B-202ENST00000415030 FAM53CQ9NYF3 392 aa13.08□□□□□ -0.32
SCN4B-202ENST00000415030 SLIT1O75093 1534 aa13.08□□□□□ -0.32
SCN4B-202ENST00000415030 CACNA1FO60840 1977 aa13.08□□□□□ -0.32
SCN4B-202ENST00000415030 GOLGA6CA6NDK9 693 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms