RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 CACNB2Q08289 660 aaPredicted RBP16.81■□□□□ 0.28
RAPGEF1-204ENST00000414781 FKBP5Q13451 457 aaPredicted RBP16.81■□□□□ 0.28
RAPGEF1-204ENST00000414781 TREML2Q5T2D2 321 aa16.81■□□□□ 0.28
RAPGEF1-204ENST00000414781 SENP6Q9GZR1 1112 aaPredicted RBP16.81■□□□□ 0.28
RAPGEF1-204ENST00000414781 MORF4L1Q9UBU8 362 aa16.81■□□□□ 0.28
RAPGEF1-204ENST00000414781 FAM198AQ9UFP1 575 aa16.81■□□□□ 0.28
RAPGEF1-204ENST00000414781 DAGLAQ9Y4D2 1042 aa16.81■□□□□ 0.28
RAPGEF1-204ENST00000414781 SUPT16HQ9Y5B9 1047 aaKnown RBP16.81■□□□□ 0.28
RAPGEF1-204ENST00000414781 DOCK3Q8IZD9 2030 aa16.8■□□□□ 0.28
RAPGEF1-204ENST00000414781 BCAR3O75815 825 aa16.8■□□□□ 0.28
RAPGEF1-204ENST00000414781 MAP3K10Q02779 954 aa16.8■□□□□ 0.28
RAPGEF1-204ENST00000414781 PDE3AQ14432 1141 aa16.8■□□□□ 0.28
RAPGEF1-204ENST00000414781 C9orf50Q5SZB4 431 aa16.8■□□□□ 0.28
RAPGEF1-204ENST00000414781 MRPL50Q8N5N7 158 aaKnown RBP16.8■□□□□ 0.28
RAPGEF1-204ENST00000414781 USP38Q8NB14 1042 aa16.8■□□□□ 0.28
RAPGEF1-204ENST00000414781 WDR66Q8TBY9 1149 aa16.8■□□□□ 0.28
RAPGEF1-204ENST00000414781 ADAMTS19Q8TE59 1207 aa16.8■□□□□ 0.28
RAPGEF1-204ENST00000414781 ARHGAP45Q92619 1136 aa16.8■□□□□ 0.28
RAPGEF1-204ENST00000414781 ENTPD3O75355 529 aa16.79■□□□□ 0.28
RAPGEF1-204ENST00000414781 TBC1D2Q9BYX2 928 aa16.79■□□□□ 0.28
RAPGEF1-204ENST00000414781 CDH23Q9H251 3354 aa16.79■□□□□ 0.28
RAPGEF1-204ENST00000414781 MAST2Q6P0Q8 1798 aa16.79■□□□□ 0.28
RAPGEF1-204ENST00000414781 PTPRCP08575 1304 aa16.78■□□□□ 0.28
RAPGEF1-204ENST00000414781 MSCO60682 206 aa16.78■□□□□ 0.28
RAPGEF1-204ENST00000414781 RTP1P59025 263 aa16.78■□□□□ 0.28
RAPGEF1-204ENST00000414781 ZKSCAN2Q63HK3 967 aa16.78■□□□□ 0.28
RAPGEF1-204ENST00000414781 IL27Q8NEV9 243 aa16.78■□□□□ 0.28
RAPGEF1-204ENST00000414781 FRAT1Q92837 279 aaPredicted RBP16.78■□□□□ 0.28
RAPGEF1-204ENST00000414781 ASB2Q96Q27 587 aa16.78■□□□□ 0.28
RAPGEF1-204ENST00000414781 UHRF1Q96T88 793 aaPredicted RBP16.78■□□□□ 0.28
RAPGEF1-204ENST00000414781 USP40Q9NVE5 1235 aa16.78■□□□□ 0.28
RAPGEF1-204ENST00000414781 THEGQ9P2T0 379 aa16.78■□□□□ 0.28
RAPGEF1-204ENST00000414781 HCN4Q9Y3Q4 1203 aa16.78■□□□□ 0.28
RAPGEF1-204ENST00000414781 CCND3P30281 292 aaPredicted RBP16.77■□□□□ 0.28
RAPGEF1-204ENST00000414781 MAPK4P31152 587 aa16.77■□□□□ 0.28
RAPGEF1-204ENST00000414781 RGS2P41220 211 aa16.77■□□□□ 0.28
RAPGEF1-204ENST00000414781 EPHA10Q5JZY3 1008 aa16.77■□□□□ 0.28
RAPGEF1-204ENST00000414781 API5Q9BZZ5 524 aaKnown RBP16.77■□□□□ 0.28
RAPGEF1-204ENST00000414781 ASCC2Q9H1I8 757 aaPredicted RBP16.77■□□□□ 0.28
RAPGEF1-204ENST00000414781 GRM8O00222 908 aa16.76■□□□□ 0.27
RAPGEF1-204ENST00000414781 DNM1LO00429 736 aa16.76■□□□□ 0.27
RAPGEF1-204ENST00000414781 ATN1P54259 1190 aaPredicted RBP16.76■□□□□ 0.27
RAPGEF1-204ENST00000414781 RRP1P56182 461 aaKnown RBP16.76■□□□□ 0.27
RAPGEF1-204ENST00000414781 ZSCAN29Q8IWY8 852 aaPredicted RBP16.76■□□□□ 0.27
RAPGEF1-204ENST00000414781 ZFPM1Q8IX07 1006 aa16.76■□□□□ 0.27
RAPGEF1-204ENST00000414781 APBA2Q99767 749 aa16.76■□□□□ 0.27
RAPGEF1-204ENST00000414781 IDI2Q9BXS1 227 aa16.76■□□□□ 0.27
RAPGEF1-204ENST00000414781 PUS3Q9BZE2 481 aaKnown RBP16.76■□□□□ 0.27
RAPGEF1-204ENST00000414781 NOB1Q9ULX3 412 aaKnown RBP16.76■□□□□ 0.27
RAPGEF1-204ENST00000414781 PTPRFP10586 1907 aa16.76■□□□□ 0.27
RAPGEF1-204ENST00000414781 NEFLP07196 543 aa16.75■□□□□ 0.27
RAPGEF1-204ENST00000414781 RGS3P49796 1198 aa16.75■□□□□ 0.27
RAPGEF1-204ENST00000414781 MRPS5P82675 430 aaKnown RBP16.75■□□□□ 0.27
RAPGEF1-204ENST00000414781 GRIN2CQ14957 1233 aa16.75■□□□□ 0.27
RAPGEF1-204ENST00000414781 DIXDC1Q155Q3 683 aa16.75■□□□□ 0.27
RAPGEF1-204ENST00000414781 METTL24Q5JXM2 366 aa16.75■□□□□ 0.27
RAPGEF1-204ENST00000414781 ATF7IPQ6VMQ6 1270 aa16.75■□□□□ 0.27
RAPGEF1-204ENST00000414781 ZNF280CQ8ND82 737 aa16.75■□□□□ 0.27
RAPGEF1-204ENST00000414781 GPRC5AQ8NFJ5 357 aa16.75■□□□□ 0.27
RAPGEF1-204ENST00000414781 LPAR1Q92633 364 aa16.75■□□□□ 0.27
RAPGEF1-204ENST00000414781 USP6NLQ92738 828 aa16.75■□□□□ 0.27
RAPGEF1-204ENST00000414781 ATP11BQ9Y2G3 1177 aa16.75■□□□□ 0.27
RAPGEF1-204ENST00000414781 LTBP2Q14767 1821 aa16.75■□□□□ 0.27
RAPGEF1-204ENST00000414781 PDE8BO95263 885 aa16.74■□□□□ 0.27
RAPGEF1-204ENST00000414781 IRX3P78415 501 aaPredicted RBP16.74■□□□□ 0.27
RAPGEF1-204ENST00000414781 AKNAD1Q5T1N1 836 aa16.74■□□□□ 0.27
RAPGEF1-204ENST00000414781 BADQ92934 168 aa16.74■□□□□ 0.27
RAPGEF1-204ENST00000414781 RNPC3Q96LT9 517 aaKnown RBP16.74■□□□□ 0.27
RAPGEF1-204ENST00000414781 PRDM5Q9NQX1 630 aaPredicted RBP16.74■□□□□ 0.27
RAPGEF1-204ENST00000414781 DOCK1Q14185 1865 aa16.73■□□□□ 0.27
RAPGEF1-204ENST00000414781 DOCK2Q92608 1830 aa16.73■□□□□ 0.27
RAPGEF1-204ENST00000414781 AK9Q5TCS8 1911 aa16.73■□□□□ 0.27
RAPGEF1-204ENST00000414781 IFIT1P09914 478 aaKnown RBP16.73■□□□□ 0.27
RAPGEF1-204ENST00000414781 HMGCS2P54868 508 aa16.73■□□□□ 0.27
RAPGEF1-204ENST00000414781 SPP2Q13103 211 aa16.73■□□□□ 0.27
RAPGEF1-204ENST00000414781 BEND3Q5T5X7 828 aa16.73■□□□□ 0.27
RAPGEF1-204ENST00000414781 MFSD14CQ5VZR4 134 aa16.73■□□□□ 0.27
RAPGEF1-204ENST00000414781 CCAR1Q8IX12 1150 aaKnown RBP16.73■□□□□ 0.27
RAPGEF1-204ENST00000414781 GAS2L1Q99501 681 aaPredicted RBP16.73■□□□□ 0.27
RAPGEF1-204ENST00000414781 DDX20Q9UHI6 824 aaKnown RBP16.73■□□□□ 0.27
RAPGEF1-204ENST00000414781 LOC285556D6RIA3 1793 aa16.72■□□□□ 0.27
RAPGEF1-204ENST00000414781 TBC1D12O60347 775 aa16.72■□□□□ 0.27
RAPGEF1-204ENST00000414781 LDHBP07195 334 aaKnown RBP16.72■□□□□ 0.27
RAPGEF1-204ENST00000414781 SH3D19Q5HYK7 790 aa16.72■□□□□ 0.27
RAPGEF1-204ENST00000414781 CCDC84Q86UT8 332 aaPredicted RBP16.72■□□□□ 0.27
RAPGEF1-204ENST00000414781 FTSJ3Q8IY81 847 aaKnown RBP16.72■□□□□ 0.27
RAPGEF1-204ENST00000414781 VGLL2Q8N8G2 317 aa16.72■□□□□ 0.27
RAPGEF1-204ENST00000414781 GTF3C2Q8WUA4 911 aaPredicted RBP16.72■□□□□ 0.27
RAPGEF1-204ENST00000414781 OSBPL5Q9H0X9 879 aaPredicted RBP16.72■□□□□ 0.27
RAPGEF1-204ENST00000414781 C9orf78Q9NZ63 289 aaPredicted RBP16.72■□□□□ 0.27
RAPGEF1-204ENST00000414781 RFX7Q2KHR2 1363 aa16.72■□□□□ 0.27
RAPGEF1-204ENST00000414781 PLXNB2O15031 1838 aa16.72■□□□□ 0.27
RAPGEF1-204ENST00000414781 DNAJB2P25686 324 aa16.71■□□□□ 0.27
RAPGEF1-204ENST00000414781 PUM3Q15397 648 aaKnown RBP16.71■□□□□ 0.27
RAPGEF1-204ENST00000414781 CCL14Q16627 93 aa16.71■□□□□ 0.27
RAPGEF1-204ENST00000414781 MORN1Q5T089 497 aa16.71■□□□□ 0.27
RAPGEF1-204ENST00000414781 SH3BP5LQ7L8J4 393 aa16.71■□□□□ 0.27
RAPGEF1-204ENST00000414781 ZNF576Q9H609 170 aa16.71■□□□□ 0.27
RAPGEF1-204ENST00000414781 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.71■□□□□ 0.27
RAPGEF1-204ENST00000414781 UTYO14607 1347 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms