RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 TTC6Q86TZ1 520 aa30.49■■■□□ 2.47
CPNE1-207ENST00000414664 ARMT1Q9H993 441 aa30.49■■■□□ 2.47
CPNE1-207ENST00000414664 RNF186Q9NXI6 227 aa30.49■■■□□ 2.47
CPNE1-207ENST00000414664 GTF2A2P52657 109 aa30.48■■■□□ 2.47
CPNE1-207ENST00000414664 SCYL3Q8IZE3 742 aa30.48■■■□□ 2.47
CPNE1-207ENST00000414664 CRACR2BQ8N4Y2 399 aaPredicted RBP30.48■■■□□ 2.47
CPNE1-207ENST00000414664 CNKSR2Q8WXI2 1034 aa30.48■■■□□ 2.47
CPNE1-207ENST00000414664 FSD1Q9BTV5 496 aa30.48■■■□□ 2.47
CPNE1-207ENST00000414664 PICK1Q9NRD5 415 aa30.48■■■□□ 2.47
CPNE1-207ENST00000414664 TRPA1O75762 1119 aa30.47■■■□□ 2.47
CPNE1-207ENST00000414664 HSPA8P11142 646 aaKnown RBP30.47■■■□□ 2.47
CPNE1-207ENST00000414664 PPIL2Q13356 520 aa30.47■■■□□ 2.47
CPNE1-207ENST00000414664 APPBP2Q92624 585 aa30.47■■■□□ 2.47
CPNE1-207ENST00000414664 EVI5LQ96CN4 794 aa30.47■■■□□ 2.47
CPNE1-207ENST00000414664 ALDH1A1P00352 501 aa30.46■■■□□ 2.47
CPNE1-207ENST00000414664 OTUD7BQ6GQQ9 843 aa30.46■■■□□ 2.47
CPNE1-207ENST00000414664 METTL16Q86W50 562 aaKnown RBP30.46■■■□□ 2.47
CPNE1-207ENST00000414664 PUS7LQ9H0K6 701 aaKnown RBP30.46■■■□□ 2.47
CPNE1-207ENST00000414664 ATP8A2Q9NTI2 1148 aa30.46■■■□□ 2.47
CPNE1-207ENST00000414664 MYH1P12882 1939 aa30.45■■■□□ 2.47
CPNE1-207ENST00000414664 FAM196BA6NMK8 535 aa30.45■■■□□ 2.47
CPNE1-207ENST00000414664 CHGBP05060 677 aa30.45■■■□□ 2.47
CPNE1-207ENST00000414664 SLURP2P0DP57 97 aa30.45■■■□□ 2.47
CPNE1-207ENST00000414664 LBX1P52954 281 aa30.45■■■□□ 2.47
CPNE1-207ENST00000414664 DDRGK1Q96HY6 314 aa30.45■■■□□ 2.47
CPNE1-207ENST00000414664 PRDM10Q9NQV6 1147 aa30.45■■■□□ 2.47
CPNE1-207ENST00000414664 TESPA1A2RU30 521 aaPredicted RBP30.44■■■□□ 2.46
CPNE1-207ENST00000414664 POLR3DP05423 398 aaPredicted RBP30.44■■■□□ 2.46
CPNE1-207ENST00000414664 PLEKHM2Q8IWE5 1019 aa30.44■■■□□ 2.46
CPNE1-207ENST00000414664 SDR42E1Q8WUS8 393 aa30.44■■■□□ 2.46
CPNE1-207ENST00000414664 OSBPL3Q9H4L5 887 aa30.44■■■□□ 2.46
CPNE1-207ENST00000414664 MCM9Q9NXL9 1143 aa30.44■■■□□ 2.46
CPNE1-207ENST00000414664 LAMB1P07942 1786 aa30.43■■■□□ 2.46
CPNE1-207ENST00000414664 IRF6O14896 467 aa30.43■■■□□ 2.46
CPNE1-207ENST00000414664 SNAPC2Q13487 334 aa30.43■■■□□ 2.46
CPNE1-207ENST00000414664 IFNL1Q8IU54 200 aa30.43■■■□□ 2.46
CPNE1-207ENST00000414664 MS4A4AQ96JQ5 239 aa30.43■■■□□ 2.46
CPNE1-207ENST00000414664 EHD4Q9H223 541 aa30.43■■■□□ 2.46
CPNE1-207ENST00000414664 DCP1AQ9NPI6 582 aaPredicted RBP30.43■■■□□ 2.46
CPNE1-207ENST00000414664 TSKSQ9UJT2 592 aa30.43■■■□□ 2.46
CPNE1-207ENST00000414664 CETPP11597 493 aa30.42■■■□□ 2.46
CPNE1-207ENST00000414664 SERPINB13Q9UIV8 391 aa30.42■■■□□ 2.46
CPNE1-207ENST00000414664 SLC4A4Q9Y6R1 1079 aa30.42■■■□□ 2.46
CPNE1-207ENST00000414664 CCL15-CCL14A0A0B4J2E2 113 aa30.41■■■□□ 2.46
CPNE1-207ENST00000414664 PTPRAP18433 802 aa30.41■■■□□ 2.46
CPNE1-207ENST00000414664 CAP2P40123 477 aa30.41■■■□□ 2.46
CPNE1-207ENST00000414664 CCL15Q16663 113 aa30.41■■■□□ 2.46
CPNE1-207ENST00000414664 SLC4A8Q2Y0W8 1093 aa30.41■■■□□ 2.46
CPNE1-207ENST00000414664 TICAM2Q86XR7 235 aa30.41■■■□□ 2.46
CPNE1-207ENST00000414664 OSBP2Q969R2 916 aa30.41■■■□□ 2.46
CPNE1-207ENST00000414664 STRBPQ96SI9 672 aaKnown RBP30.41■■■□□ 2.46
CPNE1-207ENST00000414664 PRKAB2O43741 272 aa30.4■■■□□ 2.46
CPNE1-207ENST00000414664 AMOTL1Q8IY63 956 aa30.4■■■□□ 2.46
CPNE1-207ENST00000414664 ZHX2Q9Y6X8 837 aa30.4■■■□□ 2.46
CPNE1-207ENST00000414664 SIPA1L1O43166 1804 aa30.39■■■□□ 2.46
CPNE1-207ENST00000414664 TRIM6-TRIM34B2RNG4 842 aa30.39■■■□□ 2.46
CPNE1-207ENST00000414664 CENPBP07199 599 aaPredicted RBP30.39■■■□□ 2.46
CPNE1-207ENST00000414664 GNAT2P19087 354 aa30.39■■■□□ 2.46
CPNE1-207ENST00000414664 DNAJC18Q9H819 358 aa30.39■■■□□ 2.46
CPNE1-207ENST00000414664 GINM1Q9NU53 330 aa30.39■■■□□ 2.46
CPNE1-207ENST00000414664 KCNH4Q9UQ05 1017 aa30.39■■■□□ 2.46
CPNE1-207ENST00000414664 DOCK1Q14185 1865 aa30.39■■■□□ 2.46
CPNE1-207ENST00000414664 NAV1Q8NEY1 1877 aa30.39■■■□□ 2.46
CPNE1-207ENST00000414664 IGF2BP3O00425 579 aaKnown RBP eCLIP30.38■■■□□ 2.45
CPNE1-207ENST00000414664 CXCL11O14625 94 aa30.38■■■□□ 2.45
CPNE1-207ENST00000414664 BRI3BPQ8WY22 251 aa30.38■■■□□ 2.45
CPNE1-207ENST00000414664 TBC1D2Q9BYX2 928 aa30.38■■■□□ 2.45
CPNE1-207ENST00000414664 TAOK2Q9UL54 1235 aa30.38■■■□□ 2.45
CPNE1-207ENST00000414664 PLCD1P51178 756 aa30.37■■■□□ 2.45
CPNE1-207ENST00000414664 ZMYM1Q5SVZ6 1142 aa30.37■■■□□ 2.45
CPNE1-207ENST00000414664 CFHR5Q9BXR6 569 aa30.37■■■□□ 2.45
CPNE1-207ENST00000414664 GPAA1O43292 621 aa30.36■■■□□ 2.45
CPNE1-207ENST00000414664 ASNSP08243 561 aa30.36■■■□□ 2.45
CPNE1-207ENST00000414664 PTPN18Q99952 460 aa30.36■■■□□ 2.45
CPNE1-207ENST00000414664 AFG3L2Q9Y4W6 797 aa30.36■■■□□ 2.45
CPNE1-207ENST00000414664 TBC1D8O95759 1140 aa30.35■■■□□ 2.45
CPNE1-207ENST00000414664 NEFLP07196 543 aa30.35■■■□□ 2.45
CPNE1-207ENST00000414664 RRP1BQ14684 758 aaKnown RBP30.35■■■□□ 2.45
CPNE1-207ENST00000414664 TATDN1Q6P1N9 297 aa30.35■■■□□ 2.45
CPNE1-207ENST00000414664 GIMAP6Q6P9H5 292 aa30.35■■■□□ 2.45
CPNE1-207ENST00000414664 RILPL2Q969X0 211 aa30.35■■■□□ 2.45
CPNE1-207ENST00000414664 DDX60LQ5H9U9 1706 aaKnown RBP30.35■■■□□ 2.45
CPNE1-207ENST00000414664 USP17L5A8MUK1 530 aa30.34■■■□□ 2.45
CPNE1-207ENST00000414664 M0R2C6 588 aa30.34■■■□□ 2.45
CPNE1-207ENST00000414664 AS3MTQ9HBK9 375 aa30.34■■■□□ 2.45
CPNE1-207ENST00000414664 ZCCHC17Q9NP64 241 aaKnown RBP30.34■■■□□ 2.45
CPNE1-207ENST00000414664 USP17L12C9JPN9 530 aa30.32■■■□□ 2.44
CPNE1-207ENST00000414664 USP17L21D6R901 530 aa30.32■■■□□ 2.44
CPNE1-207ENST00000414664 GABPAQ06546 454 aa30.32■■■□□ 2.44
CPNE1-207ENST00000414664 CERKLQ49MI3 558 aaPredicted RBP30.32■■■□□ 2.44
CPNE1-207ENST00000414664 COL13A1Q5TAT6 717 aaPredicted RBP30.32■■■□□ 2.44
CPNE1-207ENST00000414664 FASTKD5Q7L8L6 764 aaKnown RBP30.32■■■□□ 2.44
CPNE1-207ENST00000414664 ARPP21Q9UBL0 812 aaPredicted RBP30.32■■■□□ 2.44
CPNE1-207ENST00000414664 SWAP70Q9UH65 585 aa30.32■■■□□ 2.44
CPNE1-207ENST00000414664 ATAD5Q96QE3 1844 aa30.31■■■□□ 2.44
CPNE1-207ENST00000414664 GSG1L2A8MUP6 293 aa30.31■■■□□ 2.44
CPNE1-207ENST00000414664 PATL2C9JE40 543 aaKnown RBP30.31■■■□□ 2.44
CPNE1-207ENST00000414664 GDF11O95390 407 aa30.31■■■□□ 2.44
CPNE1-207ENST00000414664 APPP05067 770 aa30.31■■■□□ 2.44
CPNE1-207ENST00000414664 PDE4AP27815 886 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms