RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 KCNA3P22001 575 aa6.25□□□□□ -1.41
VPS41-205ENST00000414632 NOS2P35228 1153 aa6.25□□□□□ -1.41
VPS41-205ENST00000414632 HIRAP54198 1017 aaPredicted RBP6.25□□□□□ -1.41
VPS41-205ENST00000414632 ST5P78524 1137 aa6.25□□□□□ -1.41
VPS41-205ENST00000414632 MRPL58Q14197 206 aaKnown RBP6.25□□□□□ -1.41
VPS41-205ENST00000414632 TWISTNBQ3B726 338 aaPredicted RBP6.25□□□□□ -1.41
VPS41-205ENST00000414632 SH3PXD2AQ5TCZ1 1133 aa6.25□□□□□ -1.41
VPS41-205ENST00000414632 C2CD5Q86YS7 1000 aa6.25□□□□□ -1.41
VPS41-205ENST00000414632 WDR63Q8IWG1 891 aa6.25□□□□□ -1.41
VPS41-205ENST00000414632 ZDHHC1Q8WTX9 485 aa6.25□□□□□ -1.41
VPS41-205ENST00000414632 ABCC12Q96J65 1359 aa6.25□□□□□ -1.41
VPS41-205ENST00000414632 MYH3P11055 1940 aa6.25□□□□□ -1.41
VPS41-205ENST00000414632 ATP10DQ9P241 1426 aa6.25□□□□□ -1.41
VPS41-205ENST00000414632 IL16Q14005 1332 aa6.25□□□□□ -1.41
VPS41-205ENST00000414632 FER1L6Q2WGJ9 1857 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 ERVV-1B6SEH8 477 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 MEN1O00255 615 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 PRPF40AO75400 957 aaKnown RBP6.24□□□□□ -1.41
VPS41-205ENST00000414632 HOXB7P09629 217 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 GTF2E1P29083 439 aaPredicted RBP6.24□□□□□ -1.41
VPS41-205ENST00000414632 PTGIRP43119 386 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 TGFB2P61812 414 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 NNTQ13423 1086 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 C11orf91Q3C1V1 193 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 SUSD4Q5VX71 490 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 CLEC4GQ6UXB4 293 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 G2E3Q7L622 706 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 ETFBKMTQ8IXQ9 262 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 ALDH16A1Q8IZ83 802 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 ZNF295-AS1Q8N0V1 137 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 ZNF622Q969S3 477 aaKnown RBP eCLIP6.24□□□□□ -1.415e-7■■□□□ 14.1
VPS41-205ENST00000414632 IFT43Q96FT9 208 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 NLRP3Q96P20 1036 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 FAM129BQ96TA1 746 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 DUSP9Q99956 384 aaKnown RBP6.24□□□□□ -1.41
VPS41-205ENST00000414632 NIF3L1Q9GZT8 377 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 DBF4Q9UBU7 674 aaPredicted RBP6.24□□□□□ -1.41
VPS41-205ENST00000414632 PARP2Q9UGN5 583 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 WASF2Q9Y6W5 498 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 ZNF521Q96K83 1311 aa6.24□□□□□ -1.41
VPS41-205ENST00000414632 H0YIN7 160 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 GPR182O15218 404 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 NTSR2O95665 410 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 YY1P25490 414 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 FGD1P98174 961 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 DNM1Q05193 864 aaKnown RBP6.23□□□□□ -1.41
VPS41-205ENST00000414632 DGKZQ13574 1117 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 RTN1Q16799 776 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 DALRD3Q5D0E6 543 aaKnown RBP6.23□□□□□ -1.41
VPS41-205ENST00000414632 CCDC30Q5VVM6 783 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 ARHGAP27Q6ZUM4 889 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 Q6ZVU0 165 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 SLC51AQ86UW1 340 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 ZNF34Q8IZ26 560 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 SYNE4Q8N205 404 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 JARID2Q92833 1246 aaPredicted RBP6.23□□□□□ -1.41
VPS41-205ENST00000414632 AGBL1Q96MI9 1066 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 FAM161BQ96MY7 647 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 MYD88Q99836 296 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 MYH16Q9H6N6 1097 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 HYPKQ9NX55 129 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 KLK14Q9P0G3 267 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 PIM2Q9P1W9 311 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 POLIQ9UNA4 740 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 COL4A1P02462 1669 aa6.23□□□□□ -1.41
VPS41-205ENST00000414632 DICER1Q9UPY3 1922 aaKnown RBP6.23□□□□□ -1.41
VPS41-205ENST00000414632 SCAMP3O14828 347 aaKnown RBP6.22□□□□□ -1.41
VPS41-205ENST00000414632 VAMP4O75379 141 aa6.22□□□□□ -1.41
VPS41-205ENST00000414632 MZF1P28698 734 aaPredicted RBP6.22□□□□□ -1.41
VPS41-205ENST00000414632 PDE6BP35913 854 aa6.22□□□□□ -1.41
VPS41-205ENST00000414632 USP5P45974 858 aa6.22□□□□□ -1.41
VPS41-205ENST00000414632 HNRNPUQ00839 825 aaKnown RBP eCLIP6.22□□□□□ -1.41
VPS41-205ENST00000414632 RELBQ01201 579 aa6.22□□□□□ -1.41
VPS41-205ENST00000414632 RASSF7Q02833 373 aa6.22□□□□□ -1.41
VPS41-205ENST00000414632 TCIRG1Q13488 830 aa6.22□□□□□ -1.41
VPS41-205ENST00000414632 LDLRAD1Q5T700 205 aa6.22□□□□□ -1.41
VPS41-205ENST00000414632 C9orf131Q5VYM1 1079 aa6.22□□□□□ -1.41
VPS41-205ENST00000414632 SPRYD7Q5W111 196 aa6.22□□□□□ -1.41
VPS41-205ENST00000414632 TPTE2Q6XPS3 522 aa6.22□□□□□ -1.41
VPS41-205ENST00000414632 NLRP10Q86W26 655 aa6.22□□□□□ -1.41
VPS41-205ENST00000414632 PLBD2Q8NHP8 589 aa6.22□□□□□ -1.41
VPS41-205ENST00000414632 EDEM1Q92611 657 aa6.22□□□□□ -1.41
VPS41-205ENST00000414632 ALKBH8Q96BT7 664 aaKnown RBP6.22□□□□□ -1.41
VPS41-205ENST00000414632 ITPKCQ96DU7 683 aa6.22□□□□□ -1.41
VPS41-205ENST00000414632 BRIP1Q9BX63 1249 aa6.22□□□□□ -1.41
VPS41-205ENST00000414632 STK31Q9BXU1 1019 aa6.22□□□□□ -1.41
VPS41-205ENST00000414632 NIFKQ9BYG3 293 aaKnown RBP6.22□□□□□ -1.41
VPS41-205ENST00000414632 PHACTR1Q9C0D0 580 aa6.22□□□□□ -1.41
VPS41-205ENST00000414632 RNF19AQ9NV58 838 aa6.22□□□□□ -1.41
VPS41-205ENST00000414632 ADCY9O60503 1353 aa6.21□□□□□ -1.41
VPS41-205ENST00000414632 GRIN3BO60391 1043 aa6.21□□□□□ -1.42
VPS41-205ENST00000414632 HCLS1P14317 486 aaPredicted RBP6.21□□□□□ -1.42
VPS41-205ENST00000414632 ZAP70P43403 619 aa6.21□□□□□ -1.42
VPS41-205ENST00000414632 ATP2B2Q01814 1243 aa6.21□□□□□ -1.42
VPS41-205ENST00000414632 SLFN5Q08AF3 891 aa6.21□□□□□ -1.42
VPS41-205ENST00000414632 FOXC1Q12948 553 aa6.21□□□□□ -1.42
VPS41-205ENST00000414632 HSP90AB3PQ58FF7 597 aa6.21□□□□□ -1.42
VPS41-205ENST00000414632 TMEM214Q6NUQ4 689 aaKnown RBP6.21□□□□□ -1.42
VPS41-205ENST00000414632 OLFM4Q6UX06 510 aa6.21□□□□□ -1.42
VPS41-205ENST00000414632 PPP1R42Q7Z4L9 355 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms