RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 NEFLP07196 543 aa17.7■□□□□ 0.42
CHD1-202ENST00000414220 CENPBP07199 599 aaPredicted RBP17.7■□□□□ 0.42
CHD1-202ENST00000414220 LBX1P52954 281 aa17.7■□□□□ 0.42
CHD1-202ENST00000414220 PPIL2Q13356 520 aa17.7■□□□□ 0.42
CHD1-202ENST00000414220 SNAPC2Q13487 334 aa17.7■□□□□ 0.42
CHD1-202ENST00000414220 EVI5LQ96CN4 794 aa17.7■□□□□ 0.42
CHD1-202ENST00000414220 ATP8A2Q9NTI2 1148 aa17.7■□□□□ 0.42
CHD1-202ENST00000414220 SAP30BPQ9UHR5 308 aaKnown RBP17.7■□□□□ 0.42
CHD1-202ENST00000414220 PALD1Q9ULE6 856 aa17.7■□□□□ 0.42
CHD1-202ENST00000414220 PHF20L1A8MW92 1017 aa17.69■□□□□ 0.42
CHD1-202ENST00000414220 HSPA8P11142 646 aaKnown RBP17.69■□□□□ 0.42
CHD1-202ENST00000414220 CETPP11597 493 aa17.69■□□□□ 0.42
CHD1-202ENST00000414220 TICAM2Q86XR7 235 aa17.69■□□□□ 0.42
CHD1-202ENST00000414220 APPBP2Q92624 585 aa17.69■□□□□ 0.42
CHD1-202ENST00000414220 TBC1D2Q9BYX2 928 aa17.69■□□□□ 0.42
CHD1-202ENST00000414220 ARMT1Q9H993 441 aa17.69■□□□□ 0.42
CHD1-202ENST00000414220 GINM1Q9NU53 330 aa17.69■□□□□ 0.42
CHD1-202ENST00000414220 MCM9Q9NXL9 1143 aa17.69■□□□□ 0.42
CHD1-202ENST00000414220 SALL3Q9BXA9 1300 aa17.69■□□□□ 0.42
CHD1-202ENST00000414220 DOCK2Q92608 1830 aa17.68■□□□□ 0.42
CHD1-202ENST00000414220 CCL15-CCL14A0A0B4J2E2 113 aa17.68■□□□□ 0.42
CHD1-202ENST00000414220 TRIM6-TRIM34B2RNG4 842 aa17.68■□□□□ 0.42
CHD1-202ENST00000414220 GNAT2P19087 354 aa17.68■□□□□ 0.42
CHD1-202ENST00000414220 CCL15Q16663 113 aa17.68■□□□□ 0.42
CHD1-202ENST00000414220 IFNL1Q8IU54 200 aa17.68■□□□□ 0.42
CHD1-202ENST00000414220 LCORLQ8N3X6 602 aa17.68■□□□□ 0.42
CHD1-202ENST00000414220 SERPINB13Q9UIV8 391 aa17.68■□□□□ 0.42
CHD1-202ENST00000414220 TAOK2Q9UL54 1235 aa17.68■□□□□ 0.42
CHD1-202ENST00000414220 SLC4A4Q9Y6R1 1079 aa17.68■□□□□ 0.42
CHD1-202ENST00000414220 TESPA1A2RU30 521 aaPredicted RBP17.67■□□□□ 0.42
CHD1-202ENST00000414220 CXCL11O14625 94 aa17.67■□□□□ 0.42
CHD1-202ENST00000414220 GJA5P36382 358 aa17.67■□□□□ 0.42
CHD1-202ENST00000414220 EHD4Q9H223 541 aa17.67■□□□□ 0.42
CHD1-202ENST00000414220 AS3MTQ9HBK9 375 aa17.67■□□□□ 0.42
CHD1-202ENST00000414220 ZHX2Q9Y6X8 837 aa17.67■□□□□ 0.42
CHD1-202ENST00000414220 IRF6O14896 467 aa17.66■□□□□ 0.42
CHD1-202ENST00000414220 ASNSP08243 561 aa17.66■□□□□ 0.42
CHD1-202ENST00000414220 CAP2P40123 477 aa17.66■□□□□ 0.42
CHD1-202ENST00000414220 METTL16Q86W50 562 aaKnown RBP17.66■□□□□ 0.42
CHD1-202ENST00000414220 SDR42E1Q8WUS8 393 aa17.66■□□□□ 0.42
CHD1-202ENST00000414220 CNKSR2Q8WXI2 1034 aa17.66■□□□□ 0.42
CHD1-202ENST00000414220 PUS7LQ9H0K6 701 aaKnown RBP17.66■□□□□ 0.42
CHD1-202ENST00000414220 OSBPL3Q9H4L5 887 aa17.66■□□□□ 0.42
CHD1-202ENST00000414220 DCP1AQ9NPI6 582 aaPredicted RBP17.66■□□□□ 0.42
CHD1-202ENST00000414220 MYO5AQ9Y4I1 1855 aaKnown RBP17.65■□□□□ 0.42
CHD1-202ENST00000414220 FAM196BA6NMK8 535 aa17.65■□□□□ 0.42
CHD1-202ENST00000414220 PTPRAP18433 802 aa17.65■□□□□ 0.42
CHD1-202ENST00000414220 FASTKD5Q7L8L6 764 aaKnown RBP17.65■□□□□ 0.42
CHD1-202ENST00000414220 RILPL2Q969X0 211 aa17.65■□□□□ 0.42
CHD1-202ENST00000414220 MS4A4AQ96JQ5 239 aa17.65■□□□□ 0.42
CHD1-202ENST00000414220 ZCCHC17Q9NP64 241 aaKnown RBP17.65■□□□□ 0.42
CHD1-202ENST00000414220 CABP5Q9NP86 173 aa17.65■□□□□ 0.42
CHD1-202ENST00000414220 TSKSQ9UJT2 592 aa17.65■□□□□ 0.42
CHD1-202ENST00000414220 APPP05067 770 aa17.64■□□□□ 0.41
CHD1-202ENST00000414220 SLC4A8Q2Y0W8 1093 aa17.64■□□□□ 0.41
CHD1-202ENST00000414220 GIMAP6Q6P9H5 292 aa17.64■□□□□ 0.41
CHD1-202ENST00000414220 NACAP1Q9BZK3 213 aa17.64■□□□□ 0.41
CHD1-202ENST00000414220 SWAP70Q9UH65 585 aa17.64■□□□□ 0.41
CHD1-202ENST00000414220 KCNH4Q9UQ05 1017 aa17.64■□□□□ 0.41
CHD1-202ENST00000414220 USP17L5A8MUK1 530 aa17.63■□□□□ 0.41
CHD1-202ENST00000414220 GPAA1O43292 621 aa17.63■□□□□ 0.41
CHD1-202ENST00000414220 SLFNL1Q499Z3 407 aa17.63■□□□□ 0.41
CHD1-202ENST00000414220 CERKLQ49MI3 558 aaPredicted RBP17.63■□□□□ 0.41
CHD1-202ENST00000414220 PLEKHM2Q8IWE5 1019 aa17.63■□□□□ 0.41
CHD1-202ENST00000414220 BRI3BPQ8WY22 251 aa17.63■□□□□ 0.41
CHD1-202ENST00000414220 STRBPQ96SI9 672 aaKnown RBP17.63■□□□□ 0.41
CHD1-202ENST00000414220 CFHR5Q9BXR6 569 aa17.63■□□□□ 0.41
CHD1-202ENST00000414220 ZFYVE28Q9HCC9 887 aa17.63■□□□□ 0.41
CHD1-202ENST00000414220 ARPP21Q9UBL0 812 aaPredicted RBP17.63■□□□□ 0.41
CHD1-202ENST00000414220 HIP1O00291 1037 aa17.62■□□□□ 0.41
CHD1-202ENST00000414220 PRKAB2O43741 272 aa17.62■□□□□ 0.41
CHD1-202ENST00000414220 TBC1D8O95759 1140 aa17.62■□□□□ 0.41
CHD1-202ENST00000414220 NOM1Q5C9Z4 860 aaKnown RBP17.62■□□□□ 0.41
CHD1-202ENST00000414220 OSBP2Q969R2 916 aa17.62■□□□□ 0.41
CHD1-202ENST00000414220 PATL2C9JE40 543 aaKnown RBP17.61■□□□□ 0.41
CHD1-202ENST00000414220 IGF2BP3O00425 579 aaKnown RBP eCLIP17.61■□□□□ 0.41
CHD1-202ENST00000414220 SLURP2P0DP57 97 aa17.61■□□□□ 0.41
CHD1-202ENST00000414220 TDO2P48775 406 aa17.61■□□□□ 0.41
CHD1-202ENST00000414220 PLCD1P51178 756 aa17.61■□□□□ 0.41
CHD1-202ENST00000414220 TAF1CQ15572 869 aaPredicted RBP17.61■□□□□ 0.41
CHD1-202ENST00000414220 ZMYM1Q5SVZ6 1142 aa17.61■□□□□ 0.41
CHD1-202ENST00000414220 TATDN1Q6P1N9 297 aa17.61■□□□□ 0.41
CHD1-202ENST00000414220 ANKRD23Q86SG2 305 aa17.61■□□□□ 0.41
CHD1-202ENST00000414220 ZNF280CQ8ND82 737 aa17.61■□□□□ 0.41
CHD1-202ENST00000414220 HELLSQ9NRZ9 838 aa17.61■□□□□ 0.41
CHD1-202ENST00000414220 AFG3L2Q9Y4W6 797 aa17.61■□□□□ 0.41
CHD1-202ENST00000414220 TRIM75PA6NK02 468 aa17.6■□□□□ 0.41
CHD1-202ENST00000414220 USP17L12C9JPN9 530 aa17.6■□□□□ 0.41
CHD1-202ENST00000414220 USP17L21D6R901 530 aa17.6■□□□□ 0.41
CHD1-202ENST00000414220 GDF11O95390 407 aa17.6■□□□□ 0.41
CHD1-202ENST00000414220 CHGBP05060 677 aa17.6■□□□□ 0.41
CHD1-202ENST00000414220 MFAP1P55081 439 aaKnown RBP17.6■□□□□ 0.41
CHD1-202ENST00000414220 PABPC4Q13310 644 aaKnown RBP eCLIP17.6■□□□□ 0.41
CHD1-202ENST00000414220 ABCB5Q2M3G0 1257 aa17.6■□□□□ 0.41
CHD1-202ENST00000414220 COL13A1Q5TAT6 717 aaPredicted RBP17.6■□□□□ 0.41
CHD1-202ENST00000414220 C12orf60Q5U649 245 aa17.6■□□□□ 0.41
CHD1-202ENST00000414220 PTPN18Q99952 460 aa17.6■□□□□ 0.41
CHD1-202ENST00000414220 ZNF287Q9HBT7 754 aa17.6■□□□□ 0.41
CHD1-202ENST00000414220 OTOFQ9HC10 1997 aa17.6■□□□□ 0.41
CHD1-202ENST00000414220 A0A0G2JLL6 359 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms