RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 PLCD1P51178 756 aa12.47□□□□□ -0.41
HLA-DMB-257ENST00000414017 TICAM2Q86XR7 235 aa12.47□□□□□ -0.41
HLA-DMB-257ENST00000414017 WRNIP1Q96S55 665 aa12.47□□□□□ -0.41
HLA-DMB-257ENST00000414017 ZNF341Q9BYN7 854 aa12.47□□□□□ -0.41
HLA-DMB-257ENST00000414017 IL25Q9H293 177 aa12.47□□□□□ -0.41
HLA-DMB-257ENST00000414017 PI4KBQ9UBF8 816 aa12.47□□□□□ -0.41
HLA-DMB-257ENST00000414017 MYH1P12882 1939 aa12.47□□□□□ -0.41
HLA-DMB-257ENST00000414017 TRPM7Q96QT4 1865 aa12.46□□□□□ -0.41
HLA-DMB-257ENST00000414017 RAD50Q92878 1312 aa12.46□□□□□ -0.41
HLA-DMB-257ENST00000414017 USP2O75604 605 aaPredicted RBP12.46□□□□□ -0.41
HLA-DMB-257ENST00000414017 HSPD1P10809 573 aaKnown RBP12.46□□□□□ -0.41
HLA-DMB-257ENST00000414017 CTR9Q6PD62 1173 aa12.46□□□□□ -0.41
HLA-DMB-257ENST00000414017 KIAA1211Q6ZU35 1233 aa12.46□□□□□ -0.41
HLA-DMB-257ENST00000414017 DYNLL2Q96FJ2 89 aa12.46□□□□□ -0.41
HLA-DMB-257ENST00000414017 ESYT1Q9BSJ8 1104 aa12.46□□□□□ -0.41
HLA-DMB-257ENST00000414017 ARPP21Q9UBL0 812 aaPredicted RBP12.46□□□□□ -0.41
HLA-DMB-257ENST00000414017 BAZ2AQ9UIF9 1905 aaKnown RBP12.46□□□□□ -0.42
HLA-DMB-257ENST00000414017 FOCADQ5VW36 1801 aa12.46□□□□□ -0.42
HLA-DMB-257ENST00000414017 ATRNL1Q5VV63 1379 aa12.45□□□□□ -0.42
HLA-DMB-257ENST00000414017 SMIM22K7EJ46 135 aa12.45□□□□□ -0.42
HLA-DMB-257ENST00000414017 HSPA6P17066 643 aa12.45□□□□□ -0.42
HLA-DMB-257ENST00000414017 HAND2P61296 217 aa12.45□□□□□ -0.42
HLA-DMB-257ENST00000414017 MKRN3Q13064 507 aaKnown RBP12.45□□□□□ -0.42
HLA-DMB-257ENST00000414017 ELP3Q9H9T3 547 aa12.45□□□□□ -0.42
HLA-DMB-257ENST00000414017 ANO2Q9NQ90 1003 aa12.45□□□□□ -0.42
HLA-DMB-257ENST00000414017 CREBZFQ9NS37 354 aa12.45□□□□□ -0.42
HLA-DMB-257ENST00000414017 MKRN1Q9UHC7 482 aaKnown RBP12.45□□□□□ -0.42
HLA-DMB-257ENST00000414017 SERPINB13Q9UIV8 391 aa12.45□□□□□ -0.42
HLA-DMB-257ENST00000414017 CSADQ9Y600 493 aa12.45□□□□□ -0.42
HLA-DMB-257ENST00000414017 PAPPA2Q9BXP8 1791 aa12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 MPHOSPH10O00566 681 aaKnown RBP12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 SGSM2O43147 1006 aa12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 GDF11O95390 407 aa12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 FGAP02671 866 aa12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 INPP5BP32019 993 aa12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 ZNF157P51786 506 aaPredicted RBP12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 FKBP1BP68106 108 aa12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 MAP3K9P80192 1104 aa12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 CTDSPL2Q05D32 466 aa12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 C12orf60Q5U649 245 aa12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 GIMAP6Q6P9H5 292 aa12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 SAPCD2Q86UD0 394 aa12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 FOXP4Q8IVH2 680 aaPredicted RBP12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 SLC44A5Q8NCS7 719 aa12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 ZKSCAN4Q969J2 545 aaPredicted RBP12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 CLMNQ96JQ2 1002 aa12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 TOMM22Q9NS69 142 aa12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 TLL2Q9Y6L7 1015 aa12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 COL2A1P02458 1487 aaPredicted RBP12.44□□□□□ -0.42
HLA-DMB-257ENST00000414017 FOXP2O15409 715 aa12.43□□□□□ -0.42
HLA-DMB-257ENST00000414017 SLC3A2P08195 630 aaKnown RBP12.43□□□□□ -0.42
HLA-DMB-257ENST00000414017 PTH1RQ03431 593 aa12.43□□□□□ -0.42
HLA-DMB-257ENST00000414017 PPARAQ07869 468 aa12.43□□□□□ -0.42
HLA-DMB-257ENST00000414017 ANKRD13AQ8IZ07 590 aa12.43□□□□□ -0.42
HLA-DMB-257ENST00000414017 KLRG1Q96E93 195 aa12.43□□□□□ -0.42
HLA-DMB-257ENST00000414017 SLC10A4Q96EP9 437 aa12.43□□□□□ -0.42
HLA-DMB-257ENST00000414017 DNAJC18Q9H819 358 aa12.43□□□□□ -0.42
HLA-DMB-257ENST00000414017 MKNK2Q9HBH9 465 aa12.43□□□□□ -0.42
HLA-DMB-257ENST00000414017 HERC5Q9UII4 1024 aaKnown RBP12.43□□□□□ -0.42
HLA-DMB-257ENST00000414017 TBC1D12O60347 775 aa12.42□□□□□ -0.42
HLA-DMB-257ENST00000414017 PRDM1O75626 825 aa12.42□□□□□ -0.42
HLA-DMB-257ENST00000414017 CDK8P49336 464 aa12.42□□□□□ -0.42
HLA-DMB-257ENST00000414017 VGLL4Q14135 290 aa12.42□□□□□ -0.42
HLA-DMB-257ENST00000414017 DEFB115Q30KQ5 88 aa12.42□□□□□ -0.42
HLA-DMB-257ENST00000414017 SBK1Q52WX2 424 aa12.42□□□□□ -0.42
HLA-DMB-257ENST00000414017 CYP4F22Q6NT55 531 aa12.42□□□□□ -0.42
HLA-DMB-257ENST00000414017 RGMBQ6NW40 437 aa12.42□□□□□ -0.42
HLA-DMB-257ENST00000414017 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.42□□□□□ -0.42
HLA-DMB-257ENST00000414017 DSCC1Q9BVC3 393 aa12.42□□□□□ -0.42
HLA-DMB-257ENST00000414017 EHD4Q9H223 541 aa12.42□□□□□ -0.42
HLA-DMB-257ENST00000414017 PICK1Q9NRD5 415 aa12.42□□□□□ -0.42
HLA-DMB-257ENST00000414017 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.42□□□□□ -0.42
HLA-DMB-257ENST00000414017 DDX60LQ5H9U9 1706 aaKnown RBP12.42□□□□□ -0.42
HLA-DMB-257ENST00000414017 PHF20L1A8MW92 1017 aa12.41□□□□□ -0.42
HLA-DMB-257ENST00000414017 ZNF213O14771 459 aa12.41□□□□□ -0.42
HLA-DMB-257ENST00000414017 SHMT1P34896 483 aa12.41□□□□□ -0.42
HLA-DMB-257ENST00000414017 RRP1BQ14684 758 aaKnown RBP12.41□□□□□ -0.42
HLA-DMB-257ENST00000414017 ALX1Q15699 326 aa12.41□□□□□ -0.42
HLA-DMB-257ENST00000414017 SHROOM1Q2M3G4 852 aaPredicted RBP12.41□□□□□ -0.42
HLA-DMB-257ENST00000414017 CERKLQ49MI3 558 aaPredicted RBP12.41□□□□□ -0.42
HLA-DMB-257ENST00000414017 RRP12Q5JTH9 1297 aaKnown RBP12.41□□□□□ -0.42
HLA-DMB-257ENST00000414017 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.41□□□□□ -0.42
HLA-DMB-257ENST00000414017 C16orf86Q6ZW13 317 aa12.41□□□□□ -0.42
HLA-DMB-257ENST00000414017 CCDC84Q86UT8 332 aaPredicted RBP12.41□□□□□ -0.42
HLA-DMB-257ENST00000414017 INCENPQ9NQS7 918 aa12.41□□□□□ -0.42
HLA-DMB-257ENST00000414017 SWAP70Q9UH65 585 aa12.41□□□□□ -0.42
HLA-DMB-257ENST00000414017 CTNNA3Q9UI47 895 aa12.41□□□□□ -0.42
HLA-DMB-257ENST00000414017 SIPA1L1O43166 1804 aa12.41□□□□□ -0.42
HLA-DMB-257ENST00000414017 CTNND1O60716 968 aaKnown RBP12.4□□□□□ -0.42
HLA-DMB-257ENST00000414017 CAPN15O75808 1086 aa12.4□□□□□ -0.42
HLA-DMB-257ENST00000414017 PDE4BQ07343 736 aa12.4□□□□□ -0.42
HLA-DMB-257ENST00000414017 RAB3GAP1Q15042 981 aa12.4□□□□□ -0.42
HLA-DMB-257ENST00000414017 MAP3K11Q16584 847 aa12.4□□□□□ -0.42
HLA-DMB-257ENST00000414017 IMMTQ16891 758 aaKnown RBP12.4□□□□□ -0.42
HLA-DMB-257ENST00000414017 ABCB5Q2M3G0 1257 aa12.4□□□□□ -0.42
HLA-DMB-257ENST00000414017 LDLRAD1Q5T700 205 aa12.4□□□□□ -0.42
HLA-DMB-257ENST00000414017 SCYL3Q8IZE3 742 aa12.4□□□□□ -0.42
HLA-DMB-257ENST00000414017 OTUD5Q96G74 571 aa12.4□□□□□ -0.42
HLA-DMB-257ENST00000414017 LSG1Q9H089 658 aaKnown RBP12.4□□□□□ -0.42
HLA-DMB-257ENST00000414017 CABP5Q9NP86 173 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms