RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 WDR18Q9BV38 432 aa7.72□□□□□ -1.17
USP54-202ENST00000413442 ELP3Q9H9T3 547 aa7.72□□□□□ -1.17
USP54-202ENST00000413442 PIH1D3Q9NQM4 214 aaKnown RBP7.72□□□□□ -1.17
USP54-202ENST00000413442 AATFQ9NY61 560 aaKnown RBP eCLIP7.72□□□□□ -1.17
USP54-202ENST00000413442 SERPINB13Q9UIV8 391 aa7.72□□□□□ -1.17
USP54-202ENST00000413442 AFG3L2Q9Y4W6 797 aa7.72□□□□□ -1.17
USP54-202ENST00000413442 PCDHB15Q9Y5E8 787 aa7.72□□□□□ -1.17
USP54-202ENST00000413442 MYH1P12882 1939 aa7.72□□□□□ -1.17
USP54-202ENST00000413442 CASP8AP2Q9UKL3 1982 aa7.71□□□□□ -1.17
USP54-202ENST00000413442 CDK5RAP2Q96SN8 1893 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 CCL15-CCL14A0A0B4J2E2 113 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 USP17L5A8MUK1 530 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 GOLIM4O00461 696 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 IRF6O14896 467 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 TLR2O60603 784 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 PDE6AP16499 860 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 PTPRAP18433 802 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 HOXD10P28358 340 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 ADD2P35612 726 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 NT5C2P49902 561 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 SP3Q02447 781 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 PICALMQ13492 652 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 CCL15Q16663 113 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 TATDN1Q6P1N9 297 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 SH3BP5LQ7L8J4 393 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 CRACR2BQ8N4Y2 399 aaPredicted RBP7.71□□□□□ -1.18
USP54-202ENST00000413442 KBTBD3Q8NAB2 608 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 SH3RF3Q8TEJ3 882 aaPredicted RBP7.71□□□□□ -1.18
USP54-202ENST00000413442 TGFBRAP1Q8WUH2 860 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 OTUD5Q96G74 571 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 CCDC17Q96LX7 622 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 RIOK1Q9BRS2 568 aaKnown RBP7.71□□□□□ -1.18
USP54-202ENST00000413442 BOLA2Q9H3K6 86 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 ZNF287Q9HBT7 754 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 DDX4Q9NQI0 724 aaKnown RBP7.71□□□□□ -1.18
USP54-202ENST00000413442 TLR7Q9NYK1 1049 aaKnown RBP7.71□□□□□ -1.18
USP54-202ENST00000413442 STAP2Q9UGK3 403 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 SWAP70Q9UH65 585 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 PNMA3Q9UL41 463 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 ZHX2Q9Y6X8 837 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 MYH7P12883 1935 aa7.71□□□□□ -1.18
USP54-202ENST00000413442 OTOFQ9HC10 1997 aa7.7□□□□□ -1.18
USP54-202ENST00000413442 A0A0G2JLL6 359 aaPredicted RBP7.7□□□□□ -1.18
USP54-202ENST00000413442 TCRBV5S4A2TA0A5A2 114 aa7.7□□□□□ -1.18
USP54-202ENST00000413442 APBB1O00213 710 aa7.7□□□□□ -1.18
USP54-202ENST00000413442 INPP5BP32019 993 aa7.7□□□□□ -1.18
USP54-202ENST00000413442 USP14P54578 494 aa7.7□□□□□ -1.18
USP54-202ENST00000413442 TAF1CQ15572 869 aaPredicted RBP7.7□□□□□ -1.18
USP54-202ENST00000413442 SH3D19Q5HYK7 790 aa7.7□□□□□ -1.18
USP54-202ENST00000413442 FBXO46Q6PJ61 603 aaPredicted RBP7.7□□□□□ -1.18
USP54-202ENST00000413442 PRRT2Q7Z6L0 340 aaPredicted RBP7.7□□□□□ -1.18
USP54-202ENST00000413442 ZFPM1Q8IX07 1006 aa7.7□□□□□ -1.18
USP54-202ENST00000413442 SMC5Q8IY18 1101 aa7.7□□□□□ -1.18
USP54-202ENST00000413442 ZNF280CQ8ND82 737 aa7.7□□□□□ -1.18
USP54-202ENST00000413442 GTF3C2Q8WUA4 911 aaPredicted RBP7.7□□□□□ -1.18
USP54-202ENST00000413442 YTHDC1Q96MU7 727 aaKnown RBP7.7□□□□□ -1.18
USP54-202ENST00000413442 DNAJC2Q99543 621 aaKnown RBP7.7□□□□□ -1.18
USP54-202ENST00000413442 PTPN18Q99952 460 aa7.7□□□□□ -1.18
USP54-202ENST00000413442 ANTXR1Q9H6X2 564 aa7.7□□□□□ -1.18
USP54-202ENST00000413442 CABP5Q9NP86 173 aa7.7□□□□□ -1.18
USP54-202ENST00000413442 FLT1P17948 1338 aa7.7□□□□□ -1.18
USP54-202ENST00000413442 ZNF532Q9HCE3 1301 aa7.7□□□□□ -1.18
USP54-202ENST00000413442 DOCK1Q14185 1865 aa7.7□□□□□ -1.18
USP54-202ENST00000413442 USP17L10C9JJH3 530 aa7.69□□□□□ -1.18
USP54-202ENST00000413442 IGF2BP3O00425 579 aaKnown RBP eCLIP7.69□□□□□ -1.18
USP54-202ENST00000413442 TBC1D8O95759 1140 aa7.69□□□□□ -1.18
USP54-202ENST00000413442 POLR3DP05423 398 aaPredicted RBP7.69□□□□□ -1.18
USP54-202ENST00000413442 MX1P20591 662 aa7.69□□□□□ -1.18
USP54-202ENST00000413442 OSBPP22059 807 aa7.69□□□□□ -1.18
USP54-202ENST00000413442 HOXA7P31268 230 aaPredicted RBP7.69□□□□□ -1.18
USP54-202ENST00000413442 GJA5P36382 358 aa7.69□□□□□ -1.18
USP54-202ENST00000413442 GCLCP48506 637 aaPredicted RBP7.69□□□□□ -1.18
USP54-202ENST00000413442 DGKZQ13574 1117 aa7.69□□□□□ -1.18
USP54-202ENST00000413442 SBK1Q52WX2 424 aa7.69□□□□□ -1.18
USP54-202ENST00000413442 PPP4R3BQ5MIZ7 849 aa7.69□□□□□ -1.18
USP54-202ENST00000413442 ANKRD45Q5TZF3 282 aa7.69□□□□□ -1.18
USP54-202ENST00000413442 ZNF296Q8WUU4 475 aaPredicted RBP7.69□□□□□ -1.18
USP54-202ENST00000413442 BRI3BPQ8WY22 251 aa7.69□□□□□ -1.18
USP54-202ENST00000413442 APPBP2Q92624 585 aa7.69□□□□□ -1.18
USP54-202ENST00000413442 EVI5LQ96CN4 794 aa7.69□□□□□ -1.18
USP54-202ENST00000413442 CRBNQ96SW2 442 aa7.69□□□□□ -1.18
USP54-202ENST00000413442 OSBPL3Q9H4L5 887 aa7.69□□□□□ -1.18
USP54-202ENST00000413442 PATL2C9JE40 543 aaKnown RBP7.68□□□□□ -1.18
USP54-202ENST00000413442 BTBD19C9JJ37 291 aa7.68□□□□□ -1.18
USP54-202ENST00000413442 HIP1O00291 1037 aa7.68□□□□□ -1.18
USP54-202ENST00000413442 PDHXO00330 501 aa7.68□□□□□ -1.18
USP54-202ENST00000413442 RNF113AO15541 343 aaKnown RBP7.68□□□□□ -1.18
USP54-202ENST00000413442 MFAP1P55081 439 aaKnown RBP7.68□□□□□ -1.18
USP54-202ENST00000413442 BACE1P56817 501 aa7.68□□□□□ -1.18
USP54-202ENST00000413442 CERKLQ49MI3 558 aaPredicted RBP7.68□□□□□ -1.18
USP54-202ENST00000413442 C17orf99Q6UX52 265 aa7.68□□□□□ -1.18
USP54-202ENST00000413442 ADGRA1Q86SQ6 560 aa7.68□□□□□ -1.18
USP54-202ENST00000413442 NBPF11Q86T75 865 aa7.68□□□□□ -1.18
USP54-202ENST00000413442 MAPKAPK5Q8IW41 473 aa7.68□□□□□ -1.18
USP54-202ENST00000413442 CDAN1Q8IWY9 1227 aa7.68□□□□□ -1.18
USP54-202ENST00000413442 ABHD8Q96I13 439 aa7.68□□□□□ -1.18
USP54-202ENST00000413442 PARK7Q99497 189 aaKnown RBP7.68□□□□□ -1.18
USP54-202ENST00000413442 NACAP1Q9BZK3 213 aa7.68□□□□□ -1.18
USP54-202ENST00000413442 SH2D4AQ9H788 454 aa7.68□□□□□ -1.18
USP54-202ENST00000413442 DCP1AQ9NPI6 582 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms