RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 DIS3L2Q8IYB7 885 aaKnown RBP13.25□□□□□ -0.29
TRAFD1-202ENST00000412615 NUP133Q8WUM0 1156 aa13.25□□□□□ -0.29
TRAFD1-202ENST00000412615 CHD4Q14839 1912 aa13.24□□□□□ -0.29
TRAFD1-202ENST00000412615 BTBD18B2RXH4 712 aa13.24□□□□□ -0.29
TRAFD1-202ENST00000412615 UBE2Q2LH0YL09 131 aa13.24□□□□□ -0.29
TRAFD1-202ENST00000412615 BIN1O00499 593 aa13.24□□□□□ -0.29
TRAFD1-202ENST00000412615 GUCY1A2P33402 732 aa13.24□□□□□ -0.29
TRAFD1-202ENST00000412615 RILPL1Q5EBL4 403 aa13.24□□□□□ -0.29
TRAFD1-202ENST00000412615 BICDL1Q6ZP65 573 aa13.24□□□□□ -0.29
TRAFD1-202ENST00000412615 MTERF4Q7Z6M4 381 aaKnown RBP13.24□□□□□ -0.29
TRAFD1-202ENST00000412615 FAM84BQ96KN1 310 aaPredicted RBP13.24□□□□□ -0.29
TRAFD1-202ENST00000412615 BRIP1Q9BX63 1249 aa13.24□□□□□ -0.29
TRAFD1-202ENST00000412615 NYXQ9GZU5 481 aa13.24□□□□□ -0.29
TRAFD1-202ENST00000412615 TUBE1Q9UJT0 475 aa13.24□□□□□ -0.29
TRAFD1-202ENST00000412615 PCP11498 1178 aaKnown RBP13.24□□□□□ -0.29
TRAFD1-202ENST00000412615 FAM98CQ17RN3 349 aaKnown RBP13.24□□□□□ -0.29
TRAFD1-202ENST00000412615 KRI1Q8N9T8 703 aaKnown RBP13.24□□□□□ -0.29
TRAFD1-202ENST00000412615 CELF1Q92879 486 aaKnown RBP13.24□□□□□ -0.29
TRAFD1-202ENST00000412615 COL5A3P25940 1745 aaPredicted RBP13.24□□□□□ -0.29
TRAFD1-202ENST00000412615 TNKSO95271 1327 aa13.23□□□□□ -0.29
TRAFD1-202ENST00000412615 ZNF831Q5JPB2 1677 aa13.23□□□□□ -0.29
TRAFD1-202ENST00000412615 SEC23AQ15436 765 aa13.23□□□□□ -0.29
TRAFD1-202ENST00000412615 TBC1D9BQ66K14 1250 aa13.23□□□□□ -0.29
TRAFD1-202ENST00000412615 FBXO33Q7Z6M2 555 aa13.23□□□□□ -0.29
TRAFD1-202ENST00000412615 CCDC82Q8N4S0 544 aa13.23□□□□□ -0.29
TRAFD1-202ENST00000412615 CLIC6Q96NY7 704 aa13.23□□□□□ -0.29
TRAFD1-202ENST00000412615 NLRP3Q96P20 1036 aa13.23□□□□□ -0.29
TRAFD1-202ENST00000412615 IMPACTQ9P2X3 320 aa13.23□□□□□ -0.29
TRAFD1-202ENST00000412615 KCNJ14Q9UNX9 436 aa13.23□□□□□ -0.29
TRAFD1-202ENST00000412615 IKBKBO14920 756 aa13.23□□□□□ -0.29
TRAFD1-202ENST00000412615 GSDMDP57764 484 aa13.23□□□□□ -0.29
TRAFD1-202ENST00000412615 RPS8P62241 208 aaKnown RBP13.23□□□□□ -0.29
TRAFD1-202ENST00000412615 AKAP17AQ02040 695 aaKnown RBP13.23□□□□□ -0.29
TRAFD1-202ENST00000412615 FILIP1Q7Z7B0 1213 aa13.23□□□□□ -0.29
TRAFD1-202ENST00000412615 RNF26Q9BY78 433 aaPredicted RBP13.23□□□□□ -0.29
TRAFD1-202ENST00000412615 NARFQ9UHQ1 456 aa13.23□□□□□ -0.29
TRAFD1-202ENST00000412615 KCNH3Q9ULD8 1083 aa13.23□□□□□ -0.29
TRAFD1-202ENST00000412615 WTIPA6NIX2 430 aaPredicted RBP13.22□□□□□ -0.29
TRAFD1-202ENST00000412615 XBP1P17861 261 aa13.22□□□□□ -0.29
TRAFD1-202ENST00000412615 RC3H1Q5TC82 1133 aaKnown RBP13.22□□□□□ -0.29
TRAFD1-202ENST00000412615 ELOA2Q8IYF1 753 aaPredicted RBP13.22□□□□□ -0.29
TRAFD1-202ENST00000412615 ZSCAN10Q96SZ4 725 aaPredicted RBP13.22□□□□□ -0.29
TRAFD1-202ENST00000412615 SETDB2Q96T68 719 aa13.22□□□□□ -0.29
TRAFD1-202ENST00000412615 BCL2L12Q9HB09 334 aa13.22□□□□□ -0.29
TRAFD1-202ENST00000412615 COL4A1P02462 1669 aa13.22□□□□□ -0.29
TRAFD1-202ENST00000412615 COL1A1P02452 1464 aaPredicted RBP13.22□□□□□ -0.29
TRAFD1-202ENST00000412615 TOB1P50616 345 aaPredicted RBP13.22□□□□□ -0.29
TRAFD1-202ENST00000412615 KRBA2Q6ZNG9 492 aa13.22□□□□□ -0.29
TRAFD1-202ENST00000412615 IQCA1Q86XH1 822 aa13.22□□□□□ -0.29
TRAFD1-202ENST00000412615 CNNM3Q8NE01 707 aa13.22□□□□□ -0.29
TRAFD1-202ENST00000412615 ANKRD2Q9GZV1 360 aa13.22□□□□□ -0.29
TRAFD1-202ENST00000412615 HOOK1Q9UJC3 728 aaKnown RBP13.22□□□□□ -0.29
TRAFD1-202ENST00000412615 LTBP4Q8N2S1 1624 aa13.22□□□□□ -0.29
TRAFD1-202ENST00000412615 PDS5AQ29RF7 1337 aaKnown RBP13.21□□□□□ -0.29
TRAFD1-202ENST00000412615 RPS6KA4O75676 772 aa13.21□□□□□ -0.29
TRAFD1-202ENST00000412615 SKILP12757 684 aa13.21□□□□□ -0.29
TRAFD1-202ENST00000412615 DYNLL1P63167 89 aaKnown RBP13.21□□□□□ -0.29
TRAFD1-202ENST00000412615 DHX8Q14562 1220 aaKnown RBP13.21□□□□□ -0.29
TRAFD1-202ENST00000412615 NCAPHQ15003 741 aa13.21□□□□□ -0.29
TRAFD1-202ENST00000412615 CATIPQ7Z7H3 387 aa13.21□□□□□ -0.29
TRAFD1-202ENST00000412615 CMTR1Q8N1G2 835 aaKnown RBP13.21□□□□□ -0.29
TRAFD1-202ENST00000412615 OSBPL5Q9H0X9 879 aaPredicted RBP13.21□□□□□ -0.29
TRAFD1-202ENST00000412615 CEP131Q9UPN4 1083 aa13.21□□□□□ -0.29
TRAFD1-202ENST00000412615 FGRP09769 529 aa13.21□□□□□ -0.3
TRAFD1-202ENST00000412615 PTPREP23469 700 aa13.21□□□□□ -0.3
TRAFD1-202ENST00000412615 KCNQ4P56696 695 aa13.21□□□□□ -0.3
TRAFD1-202ENST00000412615 TPD52L1Q16890 204 aaPredicted RBP13.21□□□□□ -0.3
TRAFD1-202ENST00000412615 IFIT1BQ5T764 474 aaKnown RBP13.21□□□□□ -0.3
TRAFD1-202ENST00000412615 NBPF5PQ86XG9 351 aaPredicted RBP13.21□□□□□ -0.3
TRAFD1-202ENST00000412615 ECM29Q5VYK3 1845 aa13.21□□□□□ -0.3
TRAFD1-202ENST00000412615 SMC2O95347 1197 aa13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 CALM1P0DP23 149 aa13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 CALM2P0DP24 149 aa13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 CALM3P0DP25 149 aa13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 HIBADHP31937 336 aaKnown RBP13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 VPS72Q15906 364 aa13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 LONRF3Q496Y0 759 aa13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 TMED8Q6PL24 325 aaPredicted RBP13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 TPTE2Q6XPS3 522 aa13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 ENAHQ8N8S7 591 aaPredicted RBP13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 NSUN4Q96CB9 384 aaKnown RBP13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 RBM28Q9NW13 759 aaKnown RBP13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 IFNKQ9P0W0 207 aa13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 ZPR1O75312 459 aa13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 TNNT1P13805 278 aa13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 PNOCQ13519 176 aa13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 ARID5BQ14865 1188 aa13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 ISM2Q6H9L7 571 aa13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 OLFM4Q6UX06 510 aa13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 ZNF579Q8NAF0 562 aaKnown RBP13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 C16orf45Q96MC5 204 aaPredicted RBP13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 XPO4Q9C0E2 1151 aaKnown RBP13.2□□□□□ -0.3
TRAFD1-202ENST00000412615 RIOK3O14730 519 aaKnown RBP13.19□□□□□ -0.3
TRAFD1-202ENST00000412615 TOM1O60784 492 aa13.19□□□□□ -0.3
TRAFD1-202ENST00000412615 PIP4K2BP78356 416 aa13.19□□□□□ -0.3
TRAFD1-202ENST00000412615 NR5A1Q13285 461 aa13.19□□□□□ -0.3
TRAFD1-202ENST00000412615 CTR9Q6PD62 1173 aa13.19□□□□□ -0.3
TRAFD1-202ENST00000412615 METTL16Q86W50 562 aaKnown RBP13.19□□□□□ -0.3
TRAFD1-202ENST00000412615 ZNF384Q8TF68 577 aa13.19□□□□□ -0.3
TRAFD1-202ENST00000412615 NOL10Q9BSC4 688 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms