RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 KIAA2012Q0VF49 1180 aa11.39□□□□□ -0.59
SMPD4-203ENST00000412570 DLGAP5Q15398 846 aa11.39□□□□□ -0.59
SMPD4-203ENST00000412570 CCDC125Q86Z20 511 aa11.39□□□□□ -0.59
SMPD4-203ENST00000412570 TMEM39BQ9GZU3 492 aa11.39□□□□□ -0.59
SMPD4-203ENST00000412570 CNPY2Q9Y2B0 182 aa11.39□□□□□ -0.59
SMPD4-203ENST00000412570 FRMPD2Q68DX3 1309 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-203ENST00000412570 AKAP11Q9UKA4 1901 aa11.39□□□□□ -0.59
SMPD4-203ENST00000412570 TNS1Q9HBL0 1735 aaKnown RBP11.39□□□□□ -0.59
SMPD4-203ENST00000412570 FLT1P17948 1338 aa11.39□□□□□ -0.59
SMPD4-203ENST00000412570 PODNQ7Z5L7 613 aa11.39□□□□□ -0.59
SMPD4-203ENST00000412570 MB21D2Q8IYB1 491 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-203ENST00000412570 C7orf43Q8WVR3 580 aa11.39□□□□□ -0.59
SMPD4-203ENST00000412570 ESR2Q92731 530 aa11.39□□□□□ -0.59
SMPD4-203ENST00000412570 RNF181Q9P0P0 153 aa11.39□□□□□ -0.59
SMPD4-203ENST00000412570 ZDHHC9Q9Y397 364 aa11.39□□□□□ -0.59
SMPD4-203ENST00000412570 DDTLA6NHG4 134 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-203ENST00000412570 ZBTB43O43298 467 aa11.39□□□□□ -0.59
SMPD4-203ENST00000412570 DNM1Q05193 864 aaKnown RBP11.39□□□□□ -0.59
SMPD4-203ENST00000412570 DACT2Q5SW24 774 aa11.39□□□□□ -0.59
SMPD4-203ENST00000412570 SYT17Q9BSW7 474 aa11.39□□□□□ -0.59
SMPD4-203ENST00000412570 RBM27Q9P2N5 1060 aaKnown RBP11.39□□□□□ -0.59
SMPD4-203ENST00000412570 ORC3Q9UBD5 711 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-203ENST00000412570 ANGEL1Q9UNK9 670 aaKnown RBP11.39□□□□□ -0.59
SMPD4-203ENST00000412570 KCNJ14Q9UNX9 436 aa11.39□□□□□ -0.59
SMPD4-203ENST00000412570 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-203ENST00000412570 BAZ2AQ9UIF9 1905 aaKnown RBP11.38□□□□□ -0.59
SMPD4-203ENST00000412570 SEMA3EO15041 775 aa11.38□□□□□ -0.59
SMPD4-203ENST00000412570 DDNO94850 711 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-203ENST00000412570 TAL1P17542 331 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-203ENST00000412570 SART3Q15020 963 aaKnown RBP11.38□□□□□ -0.59
SMPD4-203ENST00000412570 TBC1D22AQ8WUA7 517 aa11.38□□□□□ -0.59
SMPD4-203ENST00000412570 STX6O43752 255 aa11.38□□□□□ -0.59
SMPD4-203ENST00000412570 PRELPP51888 382 aa11.38□□□□□ -0.59
SMPD4-203ENST00000412570 PDE4BQ07343 736 aa11.38□□□□□ -0.59
SMPD4-203ENST00000412570 IQCA1Q86XH1 822 aa11.38□□□□□ -0.59
SMPD4-203ENST00000412570 UBA5Q9GZZ9 404 aa11.38□□□□□ -0.59
SMPD4-203ENST00000412570 GNAT2P19087 354 aa11.37□□□□□ -0.59
SMPD4-203ENST00000412570 HMGB2P26583 209 aaKnown RBP11.37□□□□□ -0.59
SMPD4-203ENST00000412570 RTKN2Q8IZC4 609 aa11.37□□□□□ -0.59
SMPD4-203ENST00000412570 ZNF408Q9H9D4 720 aa11.37□□□□□ -0.59
SMPD4-203ENST00000412570 GPCPD1Q9NPB8 672 aa11.37□□□□□ -0.59
SMPD4-203ENST00000412570 IRS2Q9Y4H2 1338 aa11.37□□□□□ -0.59
SMPD4-203ENST00000412570 PLEKHA8P1O95397 391 aa11.37□□□□□ -0.59
SMPD4-203ENST00000412570 GUCY1A2P33402 732 aa11.37□□□□□ -0.59
SMPD4-203ENST00000412570 APOBEC3HQ6NTF7 200 aaKnown RBP11.37□□□□□ -0.59
SMPD4-203ENST00000412570 CSRNP1Q96S65 589 aa11.37□□□□□ -0.59
SMPD4-203ENST00000412570 RREB1Q92766 1687 aa11.37□□□□□ -0.59
SMPD4-203ENST00000412570 EAPPQ56P03 285 aaPredicted RBP11.37□□□□□ -0.59
SMPD4-203ENST00000412570 ENAHQ8N8S7 591 aaPredicted RBP11.37□□□□□ -0.59
SMPD4-203ENST00000412570 DDX49Q9Y6V7 483 aaKnown RBP11.37□□□□□ -0.59
SMPD4-203ENST00000412570 SLC3A2P08195 630 aaKnown RBP11.36□□□□□ -0.59
SMPD4-203ENST00000412570 CDK8P49336 464 aa11.36□□□□□ -0.59
SMPD4-203ENST00000412570 MCM2P49736 904 aa11.36□□□□□ -0.59
SMPD4-203ENST00000412570 GMPSP49915 693 aaPredicted RBP11.36□□□□□ -0.59
SMPD4-203ENST00000412570 RHBDL3P58872 404 aa11.36□□□□□ -0.59
SMPD4-203ENST00000412570 DGKZQ13574 1117 aa11.36□□□□□ -0.59
SMPD4-203ENST00000412570 ANKRD1Q15327 319 aa11.36□□□□□ -0.59
SMPD4-203ENST00000412570 CIAPIN1Q6FI81 312 aa11.36□□□□□ -0.59
SMPD4-203ENST00000412570 MICALL2Q8IY33 904 aa11.36□□□□□ -0.59
SMPD4-203ENST00000412570 CLIP2Q9UDT6 1046 aa11.36□□□□□ -0.59
SMPD4-203ENST00000412570 ANKRD31Q8N7Z5 1873 aa11.36□□□□□ -0.59
SMPD4-203ENST00000412570 RPAP1Q9BWH6 1393 aaPredicted RBP11.36□□□□□ -0.59
SMPD4-203ENST00000412570 CHD4Q14839 1912 aa11.36□□□□□ -0.59
SMPD4-203ENST00000412570 AKR1B1P15121 316 aa11.36□□□□□ -0.59
SMPD4-203ENST00000412570 VEGFAP15692 232 aaPredicted RBP11.36□□□□□ -0.59
SMPD4-203ENST00000412570 MCM4P33991 863 aa11.36□□□□□ -0.59
SMPD4-203ENST00000412570 SLC16A2P36021 539 aa11.36□□□□□ -0.59
SMPD4-203ENST00000412570 EXOSC10Q01780 885 aaKnown RBP11.36□□□□□ -0.59
SMPD4-203ENST00000412570 APOA5Q6Q788 366 aa11.36□□□□□ -0.59
SMPD4-203ENST00000412570 USP17L2Q6R6M4 530 aa11.36□□□□□ -0.59
SMPD4-203ENST00000412570 GTF3C6Q969F1 213 aa11.36□□□□□ -0.59
SMPD4-203ENST00000412570 NUP88Q99567 741 aaPredicted RBP11.36□□□□□ -0.59
SMPD4-203ENST00000412570 WDHD1O75717 1129 aaPredicted RBP11.36□□□□□ -0.59
SMPD4-203ENST00000412570 BAG4O95429 457 aaKnown RBP11.36□□□□□ -0.59
SMPD4-203ENST00000412570 TM6SF1Q9BZW5 370 aa11.36□□□□□ -0.59
SMPD4-203ENST00000412570 KRT23Q9C075 422 aa11.36□□□□□ -0.59
SMPD4-203ENST00000412570 ZNRF3Q9ULT6 936 aa11.36□□□□□ -0.59
SMPD4-203ENST00000412570 V9GY48 417 aaPredicted RBP11.36□□□□□ -0.59
SMPD4-203ENST00000412570 CTDNEP1O95476 244 aa11.35□□□□□ -0.59
SMPD4-203ENST00000412570 CCDC96Q2M329 555 aa11.35□□□□□ -0.59
SMPD4-203ENST00000412570 STRIP1Q5VSL9 837 aa11.35□□□□□ -0.59
SMPD4-203ENST00000412570 TMC4Q7Z404 712 aa11.35□□□□□ -0.59
SMPD4-203ENST00000412570 STAG2Q8N3U4 1231 aa11.35□□□□□ -0.59
SMPD4-203ENST00000412570 GPKOWQ92917 476 aaPredicted RBP eCLIP11.35□□□□□ -0.59
SMPD4-203ENST00000412570 ZSCAN10Q96SZ4 725 aaPredicted RBP11.35□□□□□ -0.59
SMPD4-203ENST00000412570 RNF41Q9H4P4 317 aaPredicted RBP11.35□□□□□ -0.59
SMPD4-203ENST00000412570 LY9Q9HBG7 655 aa11.35□□□□□ -0.59
SMPD4-203ENST00000412570 TMOD2Q9NZR1 351 aa11.35□□□□□ -0.59
SMPD4-203ENST00000412570 GADD45BO75293 160 aaPredicted RBP11.35□□□□□ -0.59
SMPD4-203ENST00000412570 HMGB1P09429 215 aaKnown RBP11.35□□□□□ -0.59
SMPD4-203ENST00000412570 YBX3P16989 372 aaKnown RBP eCLIP11.35□□□□□ -0.595e-7■□□□□ 9.7
SMPD4-203ENST00000412570 ZNF654Q8IZM8 581 aa11.35□□□□□ -0.59
SMPD4-203ENST00000412570 KAT14Q9H8E8 782 aa11.35□□□□□ -0.59
SMPD4-203ENST00000412570 ZNF541Q9H0D2 1346 aa11.35□□□□□ -0.59
SMPD4-203ENST00000412570 SH2B2O14492 632 aaPredicted RBP11.35□□□□□ -0.59
SMPD4-203ENST00000412570 RGL2O15211 777 aa11.35□□□□□ -0.59
SMPD4-203ENST00000412570 EPS15P42566 896 aa11.35□□□□□ -0.59
SMPD4-203ENST00000412570 AKAP17AQ02040 695 aaKnown RBP11.35□□□□□ -0.59
SMPD4-203ENST00000412570 C12orf60Q5U649 245 aa11.35□□□□□ -0.59
SMPD4-203ENST00000412570 VPS54Q9P1Q0 977 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms