RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 PTPN18Q99952 460 aa19.61■□□□□ 0.73
DDR1-230ENST00000412274 FOCADQ5VW36 1801 aa19.6■□□□□ 0.73
DDR1-230ENST00000412274 TTC6Q86TZ1 520 aa19.6■□□□□ 0.73
DDR1-230ENST00000412274 MAPKAPK5Q8IW41 473 aa19.6■□□□□ 0.73
DDR1-230ENST00000412274 MIGA1Q8NAN2 632 aa19.6■□□□□ 0.73
DDR1-230ENST00000412274 ZNF296Q8WUU4 475 aaPredicted RBP19.6■□□□□ 0.73
DDR1-230ENST00000412274 CRNKL1Q9BZJ0 848 aaKnown RBP19.6■□□□□ 0.73
DDR1-230ENST00000412274 ZFYVE28Q9HCC9 887 aa19.6■□□□□ 0.73
DDR1-230ENST00000412274 ZNF532Q9HCE3 1301 aa19.59■□□□□ 0.73
DDR1-230ENST00000412274 PTPRAP18433 802 aa19.59■□□□□ 0.73
DDR1-230ENST00000412274 DYNLL1P63167 89 aaKnown RBP19.59■□□□□ 0.73
DDR1-230ENST00000412274 UBE3CQ15386 1083 aa19.59■□□□□ 0.73
DDR1-230ENST00000412274 FASTKD5Q7L8L6 764 aaKnown RBP19.59■□□□□ 0.73
DDR1-230ENST00000412274 CTU1Q7Z7A3 348 aaKnown RBP19.59■□□□□ 0.73
DDR1-230ENST00000412274 RIOK1Q9BRS2 568 aaKnown RBP19.59■□□□□ 0.73
DDR1-230ENST00000412274 RWDD1Q9H446 243 aaPredicted RBP19.59■□□□□ 0.73
DDR1-230ENST00000412274 CASP8AP2Q9UKL3 1982 aa19.59■□□□□ 0.73
DDR1-230ENST00000412274 TCRBV5S4A2TA0A5A2 114 aa19.58■□□□□ 0.72
DDR1-230ENST00000412274 ADD2P35612 726 aa19.58■□□□□ 0.72
DDR1-230ENST00000412274 DGKZQ13574 1117 aa19.58■□□□□ 0.72
DDR1-230ENST00000412274 ARHGEF6Q15052 776 aa19.58■□□□□ 0.72
DDR1-230ENST00000412274 ANKRD23Q86SG2 305 aa19.58■□□□□ 0.72
DDR1-230ENST00000412274 CRACR2BQ8N4Y2 399 aaPredicted RBP19.58■□□□□ 0.72
DDR1-230ENST00000412274 ZHX2Q9Y6X8 837 aa19.58■□□□□ 0.72
DDR1-230ENST00000412274 CAP2P40123 477 aa19.57■□□□□ 0.72
DDR1-230ENST00000412274 CRHR2Q13324 411 aa19.57■□□□□ 0.72
DDR1-230ENST00000412274 TAF1CQ15572 869 aaPredicted RBP19.57■□□□□ 0.72
DDR1-230ENST00000412274 EHD4Q9H223 541 aa19.57■□□□□ 0.72
DDR1-230ENST00000412274 AS3MTQ9HBK9 375 aa19.57■□□□□ 0.72
DDR1-230ENST00000412274 PALD1Q9ULE6 856 aa19.57■□□□□ 0.72
DDR1-230ENST00000412274 AFG3L2Q9Y4W6 797 aa19.57■□□□□ 0.72
DDR1-230ENST00000412274 CDK5RAP2Q96SN8 1893 aa19.56■□□□□ 0.72
DDR1-230ENST00000412274 GLRX3O76003 335 aaKnown RBP19.56■□□□□ 0.72
DDR1-230ENST00000412274 ZFYP08048 801 aaPredicted RBP19.56■□□□□ 0.72
DDR1-230ENST00000412274 ASNSP08243 561 aa19.56■□□□□ 0.72
DDR1-230ENST00000412274 ERO1AQ96HE7 468 aa19.56■□□□□ 0.72
DDR1-230ENST00000412274 MCOLN1Q9GZU1 580 aa19.56■□□□□ 0.72
DDR1-230ENST00000412274 ATP8A2Q9NTI2 1148 aa19.56■□□□□ 0.72
DDR1-230ENST00000412274 SLC45A1Q9Y2W3 748 aa19.56■□□□□ 0.72
DDR1-230ENST00000412274 DOCK1Q14185 1865 aa19.56■□□□□ 0.72
DDR1-230ENST00000412274 A0A0G2JLL6 359 aaPredicted RBP19.55■□□□□ 0.72
DDR1-230ENST00000412274 USP17L5A8MUK1 530 aa19.55■□□□□ 0.72
DDR1-230ENST00000412274 BTBD19C9JJ37 291 aa19.55■□□□□ 0.72
DDR1-230ENST00000412274 ANKRD45Q5TZF3 282 aa19.55■□□□□ 0.72
DDR1-230ENST00000412274 PRRT2Q7Z6L0 340 aaPredicted RBP19.55■□□□□ 0.72
DDR1-230ENST00000412274 KBTBD3Q8NAB2 608 aa19.55■□□□□ 0.72
DDR1-230ENST00000412274 DDRGK1Q96HY6 314 aa19.55■□□□□ 0.72
DDR1-230ENST00000412274 ABHD8Q96I13 439 aa19.55■□□□□ 0.72
DDR1-230ENST00000412274 SERPINB13Q9UIV8 391 aa19.55■□□□□ 0.72
DDR1-230ENST00000412274 TLR2O60603 784 aa19.54■□□□□ 0.72
DDR1-230ENST00000412274 SP3Q02447 781 aa19.54■□□□□ 0.72
DDR1-230ENST00000412274 FAM43AQ8N2R8 423 aa19.54■□□□□ 0.72
DDR1-230ENST00000412274 EDC3Q96F86 508 aaKnown RBP19.54■□□□□ 0.72
DDR1-230ENST00000412274 SUPT16HQ9Y5B9 1047 aaKnown RBP19.54■□□□□ 0.72
DDR1-230ENST00000412274 MX1P20591 662 aa19.53■□□□□ 0.72
DDR1-230ENST00000412274 TICAM2Q86XR7 235 aa19.53■□□□□ 0.72
DDR1-230ENST00000412274 AMOTL1Q8IY63 956 aa19.53■□□□□ 0.72
DDR1-230ENST00000412274 ZNF280CQ8ND82 737 aa19.53■□□□□ 0.72
DDR1-230ENST00000412274 R3HDMLQ9H3Y0 253 aa19.53■□□□□ 0.72
DDR1-230ENST00000412274 SAP30BPQ9UHR5 308 aaKnown RBP19.53■□□□□ 0.72
DDR1-230ENST00000412274 POLR3DP05423 398 aaPredicted RBP19.52■□□□□ 0.72
DDR1-230ENST00000412274 TATDN1Q6P1N9 297 aa19.52■□□□□ 0.72
DDR1-230ENST00000412274 PROCA1Q8NCQ7 364 aaPredicted RBP19.52■□□□□ 0.72
DDR1-230ENST00000412274 WDR18Q9BV38 432 aa19.52■□□□□ 0.72
DDR1-230ENST00000412274 MYH1P12882 1939 aa19.52■□□□□ 0.72
DDR1-230ENST00000412274 PDHXO00330 501 aa19.51■□□□□ 0.71
DDR1-230ENST00000412274 PABPC4Q13310 644 aaKnown RBP eCLIP19.51■□□□□ 0.71
DDR1-230ENST00000412274 LCORLQ8N3X6 602 aa19.51■□□□□ 0.71
DDR1-230ENST00000412274 PARK7Q99497 189 aaKnown RBP19.51■□□□□ 0.71
DDR1-230ENST00000412274 DCP1AQ9NPI6 582 aaPredicted RBP19.51■□□□□ 0.71
DDR1-230ENST00000412274 MCM9Q9NXL9 1143 aa19.51■□□□□ 0.71
DDR1-230ENST00000412274 STAP2Q9UGK3 403 aa19.51■□□□□ 0.71
DDR1-230ENST00000412274 MYH7P12883 1935 aa19.51■□□□□ 0.71
DDR1-230ENST00000412274 FAM196BA6NMK8 535 aa19.5■□□□□ 0.71
DDR1-230ENST00000412274 RNF113AO15541 343 aaKnown RBP19.5■□□□□ 0.71
DDR1-230ENST00000412274 MBD4O95243 580 aa19.5■□□□□ 0.71
DDR1-230ENST00000412274 MOGSQ13724 837 aa19.5■□□□□ 0.71
DDR1-230ENST00000412274 KIF22Q14807 665 aa19.5■□□□□ 0.71
DDR1-230ENST00000412274 SMC5Q8IY18 1101 aa19.5■□□□□ 0.71
DDR1-230ENST00000412274 APPBP2Q92624 585 aa19.5■□□□□ 0.71
DDR1-230ENST00000412274 DNAJC18Q9H819 358 aa19.5■□□□□ 0.71
DDR1-230ENST00000412274 SIPA1L1O43166 1804 aa19.49■□□□□ 0.71
DDR1-230ENST00000412274 TRIM75PA6NK02 468 aa19.49■□□□□ 0.71
DDR1-230ENST00000412274 C19orf81C9J6K1 198 aa19.49■□□□□ 0.71
DDR1-230ENST00000412274 GNRH1P01148 92 aa19.49■□□□□ 0.71
DDR1-230ENST00000412274 GNAT2P19087 354 aa19.49■□□□□ 0.71
DDR1-230ENST00000412274 SH3D19Q5HYK7 790 aa19.49■□□□□ 0.71
DDR1-230ENST00000412274 GIMAP6Q6P9H5 292 aa19.49■□□□□ 0.71
DDR1-230ENST00000412274 FBXO46Q6PJ61 603 aaPredicted RBP19.49■□□□□ 0.71
DDR1-230ENST00000412274 EXOC6Q8TAG9 804 aa19.49■□□□□ 0.71
DDR1-230ENST00000412274 PI4K2BQ8TCG2 481 aa19.49■□□□□ 0.71
DDR1-230ENST00000412274 ARMT1Q9H993 441 aa19.49■□□□□ 0.71
DDR1-230ENST00000412274 CABP5Q9NP86 173 aa19.49■□□□□ 0.71
DDR1-230ENST00000412274 SWAP70Q9UH65 585 aa19.49■□□□□ 0.71
DDR1-230ENST00000412274 PNMA3Q9UL41 463 aa19.49■□□□□ 0.71
DDR1-230ENST00000412274 AGTPBP1Q9UPW5 1226 aa19.49■□□□□ 0.71
DDR1-230ENST00000412274 SLURP2P0DP57 97 aa19.48■□□□□ 0.71
DDR1-230ENST00000412274 SPP2Q13103 211 aa19.48■□□□□ 0.71
DDR1-230ENST00000412274 CERKLQ49MI3 558 aaPredicted RBP19.48■□□□□ 0.71
DDR1-230ENST00000412274 GPAT2Q6NUI2 795 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms