RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 ANTXR1Q9H6X2 564 aa12.38□□□□□ -0.43
LINC01643-201ENST00000412218 EFCC1Q9HA90 598 aa12.38□□□□□ -0.43
LINC01643-201ENST00000412218 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC01643-201ENST00000412218 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.38□□□□□ -0.43
LINC01643-201ENST00000412218 AFG3L2Q9Y4W6 797 aa12.38□□□□□ -0.43
LINC01643-201ENST00000412218 NDUFB9Q9Y6M9 179 aa12.38□□□□□ -0.43
LINC01643-201ENST00000412218 ZHX2Q9Y6X8 837 aa12.38□□□□□ -0.43
LINC01643-201ENST00000412218 RAB11FIP3O75154 756 aa12.37□□□□□ -0.43
LINC01643-201ENST00000412218 IDH1O75874 414 aaKnown RBP12.37□□□□□ -0.43
LINC01643-201ENST00000412218 CYP7A1P22680 504 aa12.37□□□□□ -0.43
LINC01643-201ENST00000412218 GPAT2Q6NUI2 795 aa12.37□□□□□ -0.43
LINC01643-201ENST00000412218 MAPKAPK5Q8IW41 473 aa12.37□□□□□ -0.43
LINC01643-201ENST00000412218 CLASRPQ8N2M8 674 aaKnown RBP12.37□□□□□ -0.43
LINC01643-201ENST00000412218 DHX36Q9H2U1 1008 aaKnown RBP12.37□□□□□ -0.43
LINC01643-201ENST00000412218 HERC5Q9UII4 1024 aaKnown RBP12.37□□□□□ -0.43
LINC01643-201ENST00000412218 RBM19Q9Y4C8 960 aaKnown RBP12.37□□□□□ -0.43
LINC01643-201ENST00000412218 APBB1O00213 710 aa12.36□□□□□ -0.43
LINC01643-201ENST00000412218 DYNLL1P63167 89 aaKnown RBP12.36□□□□□ -0.43
LINC01643-201ENST00000412218 LACTBP83111 547 aaPredicted RBP12.36□□□□□ -0.43
LINC01643-201ENST00000412218 RRP1BQ14684 758 aaKnown RBP12.36□□□□□ -0.43
LINC01643-201ENST00000412218 TMED8Q6PL24 325 aaPredicted RBP12.36□□□□□ -0.43
LINC01643-201ENST00000412218 C17orf99Q6UX52 265 aa12.36□□□□□ -0.43
LINC01643-201ENST00000412218 FASTKD5Q7L8L6 764 aaKnown RBP12.36□□□□□ -0.43
LINC01643-201ENST00000412218 CCDC84Q86UT8 332 aaPredicted RBP12.36□□□□□ -0.43
LINC01643-201ENST00000412218 MAGEB6Q8N7X4 407 aa12.36□□□□□ -0.43
LINC01643-201ENST00000412218 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC01643-201ENST00000412218 TGFBRAP1Q8WUH2 860 aa12.36□□□□□ -0.43
LINC01643-201ENST00000412218 PARK7Q99497 189 aaKnown RBP12.36□□□□□ -0.43
LINC01643-201ENST00000412218 ARHGAP39Q9C0H5 1083 aa12.36□□□□□ -0.43
LINC01643-201ENST00000412218 PI4KBQ9UBF8 816 aa12.36□□□□□ -0.43
LINC01643-201ENST00000412218 SIPA1L1O43166 1804 aa12.36□□□□□ -0.43
LINC01643-201ENST00000412218 FOCADQ5VW36 1801 aa12.35□□□□□ -0.43
LINC01643-201ENST00000412218 TRIM75PA6NK02 468 aa12.35□□□□□ -0.43
LINC01643-201ENST00000412218 IFIT2P09913 472 aaKnown RBP12.35□□□□□ -0.43
LINC01643-201ENST00000412218 CAP2P40123 477 aa12.35□□□□□ -0.43
LINC01643-201ENST00000412218 MAP3K12Q12852 859 aa12.35□□□□□ -0.43
LINC01643-201ENST00000412218 ARHGEF6Q15052 776 aa12.35□□□□□ -0.43
LINC01643-201ENST00000412218 METTL16Q86W50 562 aaKnown RBP12.35□□□□□ -0.43
LINC01643-201ENST00000412218 CERS3Q8IU89 383 aa12.35□□□□□ -0.43
LINC01643-201ENST00000412218 MIGA1Q8NAN2 632 aa12.35□□□□□ -0.43
LINC01643-201ENST00000412218 ARMC5Q96C12 935 aa12.35□□□□□ -0.43
LINC01643-201ENST00000412218 DNAJC18Q9H819 358 aa12.35□□□□□ -0.43
LINC01643-201ENST00000412218 CPA4Q9UI42 421 aa12.35□□□□□ -0.43
LINC01643-201ENST00000412218 SLC45A1Q9Y2W3 748 aa12.35□□□□□ -0.43
LINC01643-201ENST00000412218 AK9Q5TCS8 1911 aa12.35□□□□□ -0.43
LINC01643-201ENST00000412218 PHIPQ8WWQ0 1821 aa12.34□□□□□ -0.43
LINC01643-201ENST00000412218 CYP2C8P10632 490 aa12.34□□□□□ -0.43
LINC01643-201ENST00000412218 KIF22Q14807 665 aa12.34□□□□□ -0.43
LINC01643-201ENST00000412218 TTF1Q15361 905 aaPredicted RBP12.34□□□□□ -0.43
LINC01643-201ENST00000412218 GADL1Q6ZQY3 521 aa12.34□□□□□ -0.43
LINC01643-201ENST00000412218 TBC1D2Q9BYX2 928 aa12.34□□□□□ -0.43
LINC01643-201ENST00000412218 PALD1Q9ULE6 856 aa12.34□□□□□ -0.43
LINC01643-201ENST00000412218 PTCH2Q9Y6C5 1203 aa12.34□□□□□ -0.43
LINC01643-201ENST00000412218 HTTP42858 3142 aa12.33□□□□□ -0.44
LINC01643-201ENST00000412218 ZSWIM8A7E2V4 1837 aa12.33□□□□□ -0.44
LINC01643-201ENST00000412218 GNRH1P01148 92 aa12.33□□□□□ -0.44
LINC01643-201ENST00000412218 BCRP11274 1271 aa12.33□□□□□ -0.44
LINC01643-201ENST00000412218 CTGFP29279 349 aa12.33□□□□□ -0.44
LINC01643-201ENST00000412218 ZNF280CQ8ND82 737 aa12.33□□□□□ -0.44
LINC01643-201ENST00000412218 DNAJC2Q99543 621 aaKnown RBP12.33□□□□□ -0.44
LINC01643-201ENST00000412218 RIOK1Q9BRS2 568 aaKnown RBP12.33□□□□□ -0.44
LINC01643-201ENST00000412218 SAP30BPQ9UHR5 308 aaKnown RBP12.33□□□□□ -0.44
LINC01643-201ENST00000412218 AGTPBP1Q9UPW5 1226 aa12.33□□□□□ -0.44
LINC01643-201ENST00000412218 CDK5RAP2Q96SN8 1893 aa12.33□□□□□ -0.44
LINC01643-201ENST00000412218 MYO5AQ9Y4I1 1855 aaKnown RBP12.33□□□□□ -0.44
LINC01643-201ENST00000412218 LOC285556D6RIA3 1793 aa12.33□□□□□ -0.44
LINC01643-201ENST00000412218 DDX60LQ5H9U9 1706 aaKnown RBP12.32□□□□□ -0.44
LINC01643-201ENST00000412218 USP17L5A8MUK1 530 aa12.32□□□□□ -0.44
LINC01643-201ENST00000412218 GOLIM4O00461 696 aa12.32□□□□□ -0.44
LINC01643-201ENST00000412218 HLA-DOAP06340 250 aa12.32□□□□□ -0.44
LINC01643-201ENST00000412218 PDE6AP16499 860 aa12.32□□□□□ -0.44
LINC01643-201ENST00000412218 USP5P45974 858 aa12.32□□□□□ -0.44
LINC01643-201ENST00000412218 TREML2Q5T2D2 321 aa12.32□□□□□ -0.44
LINC01643-201ENST00000412218 FOXP4Q8IVH2 680 aaPredicted RBP12.32□□□□□ -0.44
LINC01643-201ENST00000412218 CRACR2BQ8N4Y2 399 aaPredicted RBP12.32□□□□□ -0.44
LINC01643-201ENST00000412218 PROCA1Q8NCQ7 364 aaPredicted RBP12.32□□□□□ -0.44
LINC01643-201ENST00000412218 TRIM47Q96LD4 638 aa12.32□□□□□ -0.44
LINC01643-201ENST00000412218 TCRBV5S4A2TA0A5A2 114 aa12.31□□□□□ -0.44
LINC01643-201ENST00000412218 ATP5JP18859 108 aa12.31□□□□□ -0.44
LINC01643-201ENST00000412218 PSMC4P43686 418 aa12.31□□□□□ -0.44
LINC01643-201ENST00000412218 PRMT2P55345 433 aa12.31□□□□□ -0.44
LINC01643-201ENST00000412218 JAG1P78504 1218 aa12.31□□□□□ -0.44
LINC01643-201ENST00000412218 SPP2Q13103 211 aa12.31□□□□□ -0.44
LINC01643-201ENST00000412218 SHROOM1Q2M3G4 852 aaPredicted RBP12.31□□□□□ -0.44
LINC01643-201ENST00000412218 SLC4A8Q2Y0W8 1093 aa12.31□□□□□ -0.44
LINC01643-201ENST00000412218 SLC9C1Q4G0N8 1177 aa12.31□□□□□ -0.44
LINC01643-201ENST00000412218 SLC9C2Q5TAH2 1124 aa12.31□□□□□ -0.44
LINC01643-201ENST00000412218 EDC3Q96F86 508 aaKnown RBP12.31□□□□□ -0.44
LINC01643-201ENST00000412218 ZNF333Q96JL9 665 aa12.31□□□□□ -0.44
LINC01643-201ENST00000412218 TRIM34Q9BYJ4 488 aa12.31□□□□□ -0.44
LINC01643-201ENST00000412218 LRRCC1Q9C099 1032 aa12.31□□□□□ -0.44
LINC01643-201ENST00000412218 BCL11AQ9H165 835 aa12.31□□□□□ -0.44
LINC01643-201ENST00000412218 EHD4Q9H223 541 aa12.31□□□□□ -0.44
LINC01643-201ENST00000412218 AS3MTQ9HBK9 375 aa12.31□□□□□ -0.44
LINC01643-201ENST00000412218 ATAD5Q96QE3 1844 aa12.31□□□□□ -0.44
LINC01643-201ENST00000412218 ZNF532Q9HCE3 1301 aa12.31□□□□□ -0.44
LINC01643-201ENST00000412218 PTPRFP10586 1907 aa12.31□□□□□ -0.44
LINC01643-201ENST00000412218 MAGEB6P1A0A0J9YX57 407 aa12.3□□□□□ -0.44
LINC01643-201ENST00000412218 POTEFA5A3E0 1075 aa12.3□□□□□ -0.44
LINC01643-201ENST00000412218 ECM2O94769 699 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms