RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 GRIN3BO60391 1043 aa6.37□□□□□ -1.39
BRCA1-204ENST00000412061 ATE1O95260 518 aa6.37□□□□□ -1.39
BRCA1-204ENST00000412061 ELNP15502 786 aa6.37□□□□□ -1.39
BRCA1-204ENST00000412061 ETFBP38117 255 aa6.37□□□□□ -1.39
BRCA1-204ENST00000412061 ZC3H12AQ5D1E8 599 aaKnown RBP6.37□□□□□ -1.39
BRCA1-204ENST00000412061 IGF2-ASQ6U949 168 aa6.37□□□□□ -1.39
BRCA1-204ENST00000412061 ACAD11Q709F0 780 aa6.37□□□□□ -1.39
BRCA1-204ENST00000412061 CYFIP1Q7L576 1253 aa6.37□□□□□ -1.39
BRCA1-204ENST00000412061 OR6P1Q8NGX9 317 aa6.37□□□□□ -1.39
BRCA1-204ENST00000412061 MICAL1Q8TDZ2 1067 aa6.37□□□□□ -1.39
BRCA1-204ENST00000412061 TMPRSS13Q9BYE2 586 aa6.37□□□□□ -1.39
BRCA1-204ENST00000412061 MRPL18Q9H0U6 180 aaKnown RBP6.37□□□□□ -1.39
BRCA1-204ENST00000412061 RNF208Q9H0X6 261 aa6.37□□□□□ -1.39
BRCA1-204ENST00000412061 TBX22Q9Y458 520 aa6.37□□□□□ -1.39
BRCA1-204ENST00000412061 PCDHGC5Q9Y5F6 944 aa6.37□□□□□ -1.39
BRCA1-204ENST00000412061 PRR36Q9H6K5 1346 aa6.36□□□□□ -1.39
BRCA1-204ENST00000412061 KRBA1A5PL33 1030 aa6.36□□□□□ -1.39
BRCA1-204ENST00000412061 RAB11FIP3O75154 756 aa6.36□□□□□ -1.39
BRCA1-204ENST00000412061 WISP1O95388 367 aa6.36□□□□□ -1.39
BRCA1-204ENST00000412061 GIPRP48546 466 aa6.36□□□□□ -1.39
BRCA1-204ENST00000412061 ID3Q02535 119 aa6.36□□□□□ -1.39
BRCA1-204ENST00000412061 PDE4BQ07343 736 aa6.36□□□□□ -1.39
BRCA1-204ENST00000412061 MLECQ14165 292 aa6.36□□□□□ -1.39
BRCA1-204ENST00000412061 AKAP4Q5JQC9 854 aa6.36□□□□□ -1.39
BRCA1-204ENST00000412061 NBPF6Q5VWK0 638 aa6.36□□□□□ -1.39
BRCA1-204ENST00000412061 GPATCH3Q96I76 525 aa6.36□□□□□ -1.39
BRCA1-204ENST00000412061 NBPF4Q96M43 638 aa6.36□□□□□ -1.39
BRCA1-204ENST00000412061 CYP4F12Q9HCS2 524 aa6.36□□□□□ -1.39
BRCA1-204ENST00000412061 PRKAG3Q9UGI9 489 aa6.36□□□□□ -1.39
BRCA1-204ENST00000412061 PRAMEF27A3QJZ7 478 aa6.35□□□□□ -1.39
BRCA1-204ENST00000412061 FAM229AH3BQW9 127 aa6.35□□□□□ -1.39
BRCA1-204ENST00000412061 K7ELQ4 463 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-204ENST00000412061 HTR3BO95264 441 aa6.35□□□□□ -1.39
BRCA1-204ENST00000412061 ERVK-24P63145 666 aa6.35□□□□□ -1.39
BRCA1-204ENST00000412061 LRRFIP1Q32MZ4 808 aaKnown RBP6.35□□□□□ -1.39
BRCA1-204ENST00000412061 TNNI3KQ59H18 835 aa6.35□□□□□ -1.39
BRCA1-204ENST00000412061 NUTM2GQ5VZR2 741 aa6.35□□□□□ -1.39
BRCA1-204ENST00000412061 KIAA1211Q6ZU35 1233 aa6.35□□□□□ -1.39
BRCA1-204ENST00000412061 ANKS3Q6ZW76 656 aa6.35□□□□□ -1.39
BRCA1-204ENST00000412061 C12orf40Q86WS4 652 aa6.35□□□□□ -1.39
BRCA1-204ENST00000412061 RBBP8NLQ8NC74 664 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-204ENST00000412061 KRTAP4-8Q9BYQ9 185 aa6.35□□□□□ -1.39
BRCA1-204ENST00000412061 PICK1Q9NRD5 415 aa6.35□□□□□ -1.39
BRCA1-204ENST00000412061 R3HCC1Q9Y3T6 440 aaKnown RBP6.35□□□□□ -1.39
BRCA1-204ENST00000412061 CSADQ9Y600 493 aa6.35□□□□□ -1.39
BRCA1-204ENST00000412061 TMPRSS2O15393 492 aa6.34□□□□□ -1.39
BRCA1-204ENST00000412061 PLCG1P19174 1290 aa6.34□□□□□ -1.39
BRCA1-204ENST00000412061 IGBP1P78318 339 aa6.34□□□□□ -1.39
BRCA1-204ENST00000412061 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.34□□□□□ -1.39
BRCA1-204ENST00000412061 NLGN1Q8N2Q7 840 aa6.34□□□□□ -1.39
BRCA1-204ENST00000412061 SMG8Q8ND04 991 aaKnown RBP6.34□□□□□ -1.39
BRCA1-204ENST00000412061 SUGCTQ9HAC7 445 aa6.34□□□□□ -1.39
BRCA1-204ENST00000412061 REV1Q9UBZ9 1251 aa6.34□□□□□ -1.39
BRCA1-204ENST00000412061 HIF3AQ9Y2N7 669 aa6.34□□□□□ -1.39
BRCA1-204ENST00000412061 CORINQ9Y5Q5 1042 aa6.34□□□□□ -1.39
BRCA1-204ENST00000412061 SMAD7O15105 426 aaKnown RBP6.33□□□□□ -1.4
BRCA1-204ENST00000412061 FANCGO15287 622 aa6.33□□□□□ -1.4
BRCA1-204ENST00000412061 COL8A1P27658 744 aa6.33□□□□□ -1.4
BRCA1-204ENST00000412061 ETF1P62495 437 aaKnown RBP6.33□□□□□ -1.4
BRCA1-204ENST00000412061 RING1Q06587 406 aa6.33□□□□□ -1.4
BRCA1-204ENST00000412061 PTPROQ16827 1216 aa6.33□□□□□ -1.4
BRCA1-204ENST00000412061 LSRQ86X29 649 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-204ENST00000412061 TRIM55Q9BYV6 548 aa6.33□□□□□ -1.4
BRCA1-204ENST00000412061 WNT10AQ9GZT5 417 aa6.33□□□□□ -1.4
BRCA1-204ENST00000412061 OSBPL2Q9H1P3 480 aa6.33□□□□□ -1.4
BRCA1-204ENST00000412061 ATXN3LQ9H3M9 355 aa6.33□□□□□ -1.4
BRCA1-204ENST00000412061 CRIM1Q9NZV1 1036 aa6.33□□□□□ -1.4
BRCA1-204ENST00000412061 ADAM30Q9UKF2 790 aa6.33□□□□□ -1.4
BRCA1-204ENST00000412061 PPP1R9AQ9ULJ8 1098 aa6.33□□□□□ -1.4
BRCA1-204ENST00000412061 AP4E1Q9UPM8 1137 aa6.33□□□□□ -1.4
BRCA1-204ENST00000412061 hCG_2014768A0A024R1R8 64 aa6.32□□□□□ -1.4
BRCA1-204ENST00000412061 MEIS3P2A8K0S8 358 aa6.32□□□□□ -1.4
BRCA1-204ENST00000412061 U2SURPO15042 1029 aaKnown RBP6.32□□□□□ -1.4
BRCA1-204ENST00000412061 KLF4O43474 513 aa6.32□□□□□ -1.4
BRCA1-204ENST00000412061 PGRP06401 933 aa6.32□□□□□ -1.4
BRCA1-204ENST00000412061 SPATA31C1P0DKV0 1188 aa6.32□□□□□ -1.4
BRCA1-204ENST00000412061 ADH5P11766 374 aa6.32□□□□□ -1.4
BRCA1-204ENST00000412061 GRK4P32298 578 aa6.32□□□□□ -1.4
BRCA1-204ENST00000412061 SOX4Q06945 474 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-204ENST00000412061 TCEAL1Q15170 157 aa6.32□□□□□ -1.4
BRCA1-204ENST00000412061 PPM1JQ5JR12 505 aa6.32□□□□□ -1.4
BRCA1-204ENST00000412061 TMEM201Q5SNT2 666 aa6.32□□□□□ -1.4
BRCA1-204ENST00000412061 ANKRD34AQ69YU3 496 aa6.32□□□□□ -1.4
BRCA1-204ENST00000412061 FDX2Q6P4F2 183 aa6.32□□□□□ -1.4
BRCA1-204ENST00000412061 TMEM130Q8N3G9 435 aa6.32□□□□□ -1.4
BRCA1-204ENST00000412061 FAM169BQ8N8A8 192 aa6.32□□□□□ -1.4
BRCA1-204ENST00000412061 RNF214Q8ND24 703 aa6.32□□□□□ -1.4
BRCA1-204ENST00000412061 HNRNPLLQ8WVV9 542 aaKnown RBP6.32□□□□□ -1.4
BRCA1-204ENST00000412061 TMEM40Q8WWA1 233 aa6.32□□□□□ -1.4
BRCA1-204ENST00000412061 FANCD2OSQ96PS1 177 aa6.32□□□□□ -1.4
BRCA1-204ENST00000412061 F8W735 103 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-204ENST00000412061 FURINP09958 794 aa6.31□□□□□ -1.4
BRCA1-204ENST00000412061 IBSPP21815 317 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-204ENST00000412061 RAB33AQ14088 237 aa6.31□□□□□ -1.4
BRCA1-204ENST00000412061 BMS1Q14692 1282 aaKnown RBP6.31□□□□□ -1.4
BRCA1-204ENST00000412061 GRIK4Q16099 956 aa6.31□□□□□ -1.4
BRCA1-204ENST00000412061 ZBTB37Q5TC79 503 aa6.31□□□□□ -1.4
BRCA1-204ENST00000412061 ZNF746Q6NUN9 644 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-204ENST00000412061 SHISA2Q6UWI4 295 aa6.31□□□□□ -1.4
BRCA1-204ENST00000412061 Q8N3U1 123 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms